MGE detailed information
MGE type: IS/Tn MGE length: 765 bp
Accession: NC_014005 Location: 7799..8563 Organism: Sphingobium japonicum UT26S Replicon: plasmid pUT1
Accession: NC_014005 Location: 7799..8563 Organism: Sphingobium japonicum UT26S Replicon: plasmid pUT1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
SJA_RS20555 () | 3225..3548 | + | 324 | WP_013038657.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
SJA_RS20560 () | 3545..3826 | + | 282 | WP_013038658.1 | helix-turn-helix domain-containing protein | - |
SJA_RS20565 () | 3839..4075 | + | 237 | WP_013038659.1 | hypothetical protein | - |
SJA_RS20570 () | 4065..4247 | + | 183 | WP_013038660.1 | hypothetical protein | - |
SJA_RS20575 () | 4244..4870 | + | 627 | WP_013038661.1 | histidine phosphatase family protein | - |
SJA_RS22330 () | 4867..5325 | - | 459 | WP_148225650.1 | hypothetical protein | - |
SJA_RS20585 () | 5368..7734 | - | 2367 | Protein_10 | Tn3 family transposase | - |
SJA_RS20590 () | 7799..8563 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
SJA_RS20595 () | 8657..9931 | + | 1275 | WP_013038664.1 | efflux RND transporter permease subunit | - |
SJA_RS20600 () | 9924..11327 | + | 1404 | WP_013038665.1 | efflux transporter outer membrane subunit | - |
SJA_RS20605 () | 11496..11744 | + | 249 | WP_007682496.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
SJA_RS20610 () | 11741..12130 | + | 390 | WP_007682494.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
SJA_RS20615 () | 12130..12435 | + | 306 | WP_007682492.1 | hypothetical protein | - |
SJA_RS20620 () | 12432..12830 | + | 399 | WP_007682491.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|