MGE detailed information
MGE type: Mobilizable plasmid MGE length: 31776 bp
Accession: NC_014005 Location: 1..31776 Organism: Sphingobium japonicum UT26S Replicon: plasmid pUT1
Accession: NC_014005 Location: 1..31776 Organism: Sphingobium japonicum UT26S Replicon: plasmid pUT1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SJA_RS20535 () | 1..1104 | + | 1104 | WP_004213366.1 | replication initiator protein A | - |
| SJA_RS20540 () | 1133..1417 | - | 285 | WP_013038654.1 | hypothetical protein | - |
| SJA_RS20545 () | 1417..2052 | - | 636 | WP_004213364.1 | AAA family ATPase | - |
| SJA_RS20550 () | 2174..2806 | - | 633 | WP_013038655.1 | transcription elongation protein SprT | - |
| SJA_RS20555 () | 3225..3548 | + | 324 | WP_013038657.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SJA_RS20560 () | 3545..3826 | + | 282 | WP_013038658.1 | helix-turn-helix domain-containing protein | - |
| SJA_RS20565 () | 3839..4075 | + | 237 | WP_013038659.1 | hypothetical protein | - |
| SJA_RS20570 () | 4065..4247 | + | 183 | WP_013038660.1 | hypothetical protein | - |
| SJA_RS20575 () | 4244..4870 | + | 627 | WP_013038661.1 | histidine phosphatase family protein | - |
| SJA_RS22330 () | 4867..5325 | - | 459 | WP_148225650.1 | hypothetical protein | - |
| SJA_RS20585 () | 5368..7734 | - | 2367 | Protein_10 | Tn3 family transposase | - |
| SJA_RS20590 () | 7799..8563 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| SJA_RS20595 () | 8657..9931 | + | 1275 | WP_013038664.1 | efflux RND transporter permease subunit | - |
| SJA_RS20600 () | 9924..11327 | + | 1404 | WP_013038665.1 | efflux transporter outer membrane subunit | - |
| SJA_RS20605 () | 11496..11744 | + | 249 | WP_007682496.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| SJA_RS20610 () | 11741..12130 | + | 390 | WP_007682494.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| SJA_RS20615 () | 12130..12435 | + | 306 | WP_007682492.1 | hypothetical protein | - |
| SJA_RS20620 () | 12432..12830 | + | 399 | WP_007682491.1 | hypothetical protein | - |
| SJA_RS20625 () | 12830..13792 | + | 963 | WP_007682488.1 | tyrosine-type recombinase/integrase | - |
| SJA_RS20630 () | 13856..14953 | + | 1098 | WP_007683624.1 | IS630 family transposase | - |
| SJA_RS21730 () | 14999..15322 | - | 324 | Protein_20 | transposase | - |
| SJA_RS20635 () | 15404..16267 | - | 864 | WP_004211466.1 | IS21-like element helper ATPase IstB | - |
| SJA_RS21735 () | 16264..16816 | - | 553 | Protein_22 | IS21 family transposase | - |
| SJA_RS20645 () | 16813..18009 | - | 1197 | WP_007684572.1 | IS256 family transposase | - |
| SJA_RS20650 () | 18100..18864 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| SJA_RS20655 () | 18902..19291 | - | 390 | Protein_25 | recombinase family protein | - |
| SJA_RS20660 () | 19457..20149 | + | 693 | WP_007685994.1 | hypothetical protein | - |
| SJA_RS21745 () | 21353..21547 | - | 195 | WP_041386987.1 | helix-turn-helix transcriptional regulator | - |
| SJA_RS20675 () | 21583..22320 | - | 738 | WP_013038672.1 | hypothetical protein | - |
| SJA_RS20680 () | 22478..25603 | - | 3126 | WP_013038673.1 | Ti-type conjugative transfer relaxase TraA | - |
| SJA_RS20685 () | 25780..26085 | + | 306 | WP_013038674.1 | conjugal transfer protein TraD | - |
| SJA_RS20690 () | 26123..26359 | + | 237 | WP_013038675.1 | conjugal transfer protein TraD | - |
| SJA_RS20695 () | 26352..26627 | + | 276 | WP_013038676.1 | hypothetical protein | - |
| SJA_RS20700 () | 26624..26908 | + | 285 | WP_013038677.1 | hypothetical protein | - |
| SJA_RS20705 () | 26905..27840 | + | 936 | WP_013038678.1 | HEPN domain-containing protein | - |
| SJA_RS20710 () | 27837..28553 | + | 717 | WP_013038679.1 | SIMPL domain-containing protein | - |
| SJA_RS20715 () | 28560..30221 | + | 1662 | WP_013038680.1 | type IV secretory system conjugative DNA transfer family protein | - |
| SJA_RS20720 () | 30259..30720 | + | 462 | WP_013038681.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|