MGE detailed information
MGE type: Prophage MGE length: 79078 bp
Accession: NC_013960 Location: 950230..1029307 Organism: Nitrosococcus halophilus Nc 4 Replicon: chromosome
Accession: NC_013960 Location: 950230..1029307 Organism: Nitrosococcus halophilus Nc 4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHAL_RS04585 () | 945557..946312 | - | 756 | WP_013032000.1 | UDP-2,3-diacylglucosamine diphosphatase | - |
| NHAL_RS04590 () | 946328..946921 | - | 594 | WP_013032001.1 | peptidyl-prolyl cis-trans isomerase | - |
| NHAL_RS04595 () | 947070..948497 | + | 1428 | WP_013032002.1 | glutamate--tRNA ligase | - |
| NHAL_RS04600 () | 948605..950059 | + | 1455 | WP_013032003.1 | cysteine--tRNA ligase | - |
| NHAL_RS04605 () | 950230..951084 | - | 855 | WP_013032004.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| NHAL_RS04620 () | 951492..952115 | - | 624 | WP_083761357.1 | IS91 family transposase ISCARN110 | Transposase |
| NHAL_RS04625 () | 952145..953368 | + | 1224 | WP_013032005.1 | IS256 family transposase ISSod18 | Transposase |
| NHAL_RS04630 () | 953733..953972 | + | 240 | WP_041355411.1 | type II toxin-antitoxin system HicA family toxin | - |
| NHAL_RS04635 () | 953969..954178 | + | 210 | WP_013032007.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NHAL_RS04640 () | 954217..954561 | + | 345 | WP_203434358.1 | hypothetical protein | - |
| NHAL_RS04645 () | 954565..954867 | + | 303 | WP_013032009.1 | BrnA antitoxin family protein | - |
| NHAL_RS04650 () | 954864..955112 | + | 249 | WP_013032010.1 | CopG family transcriptional regulator | - |
| NHAL_RS04655 () | 955129..955329 | + | 201 | WP_013032011.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NHAL_RS04660 () | 955388..956539 | - | 1152 | WP_013032012.1 | hypothetical protein | - |
| NHAL_RS04665 () | 956536..957033 | - | 498 | WP_013032013.1 | DUF4365 domain-containing protein | - |
| NHAL_RS04670 () | 957297..957524 | - | 228 | WP_013032014.1 | hypothetical protein | - |
| NHAL_RS19635 () | 957526..958242 | - | 717 | WP_049780580.1 | helix-turn-helix domain-containing protein | - |
| NHAL_RS04680 () | 958373..958618 | + | 246 | WP_013032016.1 | helix-turn-helix domain-containing protein | - |
| NHAL_RS04685 () | 958615..958803 | + | 189 | WP_013032017.1 | hypothetical protein | - |
| NHAL_RS04690 () | 958800..959072 | + | 273 | WP_013032018.1 | helix-turn-helix transcriptional regulator | - |
| NHAL_RS04695 () | 959269..959493 | + | 225 | WP_013032019.1 | KilA-N domain-containing protein | - |
| NHAL_RS04700 () | 959556..960779 | + | 1224 | WP_013031487.1 | IS256 family transposase ISSod18 | Transposase |
| NHAL_RS20810 () | 960740..961045 | - | 306 | WP_013032020.1 | hypothetical protein | - |
| NHAL_RS04715 () | 961875..962837 | - | 963 | WP_013032021.1 | hypothetical protein ; Integrase | Integrase |
| NHAL_RS04720 () | 962821..963039 | - | 219 | WP_013032022.1 | DUF4224 domain-containing protein | - |
| NHAL_RS04725 () | 963096..963917 | - | 822 | WP_013032023.1 | DUF2303 family protein | - |
| NHAL_RS04730 () | 963921..964265 | - | 345 | WP_013032024.1 | hypothetical protein | - |
| NHAL_RS04735 () | 964280..964486 | - | 207 | WP_013032025.1 | hypothetical protein | - |
| NHAL_RS04740 () | 964483..964668 | - | 186 | WP_013032026.1 | hypothetical protein | - |
| NHAL_RS04745 () | 964665..964973 | - | 309 | WP_013032027.1 | DUF4326 domain-containing protein | - |
| NHAL_RS04750 () | 964987..965682 | - | 696 | WP_013032028.1 | hypothetical protein | - |
| NHAL_RS04755 () | 965679..966296 | - | 618 | WP_013032029.1 | hypothetical protein | - |
| NHAL_RS04760 () | 966293..966511 | - | 219 | WP_013032030.1 | hypothetical protein | - |
| NHAL_RS04765 () | 966588..966992 | - | 405 | WP_157862621.1 | hypothetical protein | - |
| NHAL_RS20925 () | 966980..967141 | - | 162 | WP_157862480.1 | hypothetical protein | - |
| NHAL_RS04770 () | 967434..967721 | + | 288 | WP_013032033.1 | BrnT family toxin | - |
| NHAL_RS04775 () | 967804..968019 | + | 216 | WP_203434387.1 | BrnA antitoxin family protein | - |
| NHAL_RS04785 () | 968426..969115 | - | 690 | WP_041354648.1 | helix-turn-helix domain-containing protein | - |
| NHAL_RS04790 () | 969117..969335 | + | 219 | WP_013032037.1 | helix-turn-helix domain-containing protein | - |
| NHAL_RS04795 () | 969332..969529 | + | 198 | WP_013032038.1 | hypothetical protein | - |
| NHAL_RS04800 () | 969526..969798 | + | 273 | WP_013032039.1 | hypothetical protein | - |
| NHAL_RS04805 () | 969908..970255 | + | 348 | WP_013032040.1 | hypothetical protein | - |
| NHAL_RS20930 () | 970259..970426 | + | 168 | WP_013032041.1 | hypothetical protein | - |
| NHAL_RS04810 () | 970730..973162 | + | 2433 | WP_013032043.1 | toprim domain-containing protein | - |
| NHAL_RS04815 () | 973484..973681 | + | 198 | WP_013032045.1 | hypothetical protein | - |
| NHAL_RS04820 () | 973824..974363 | + | 540 | WP_157862481.1 | hypothetical protein | - |
| NHAL_RS19640 () | 974364..975425 | + | 1062 | WP_049780581.1 | Bro-N domain-containing protein | - |
| NHAL_RS19645 () | 975534..976484 | + | 951 | WP_013032048.1 | Bro-N domain-containing protein | - |
| NHAL_RS04835 () | 976486..978444 | + | 1959 | WP_013032049.1 | phage terminase large subunit family protein | - |
| NHAL_RS04840 () | 978426..978734 | + | 309 | WP_157862482.1 | hypothetical protein | - |
| NHAL_RS04845 () | 978765..979052 | + | 288 | WP_013032051.1 | hypothetical protein | - |
| NHAL_RS04850 () | 979342..979527 | + | 186 | WP_013032052.1 | hypothetical protein | - |
| NHAL_RS19650 () | 979556..980101 | + | 546 | WP_013032053.1 | GNAT family N-acetyltransferase | - |
| NHAL_RS04860 () | 980164..980523 | + | 360 | WP_013032054.1 | hypothetical protein | - |
| NHAL_RS04865 () | 980715..981590 | - | 876 | WP_013032055.1 | DNA adenine methylase | - |
| NHAL_RS04870 () | 981615..983060 | - | 1446 | WP_157862623.1 | hypothetical protein | - |
| NHAL_RS19655 () | 983402..984463 | + | 1062 | WP_013032057.1 | ORF6N domain-containing protein | - |
| NHAL_RS04880 () | 984553..984993 | + | 441 | WP_013032058.1 | DUF29 domain-containing protein | - |
| NHAL_RS04885 () | 985175..985405 | + | 231 | WP_203434359.1 | hypothetical protein | - |
| NHAL_RS04890 () | 985405..985821 | + | 417 | WP_013032060.1 | glycoside hydrolase family protein | - |
| NHAL_RS04895 () | 985818..987296 | + | 1479 | WP_013032061.1 | phage portal protein | - |
| NHAL_RS04900 () | 987392..989659 | + | 2268 | WP_157862483.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| NHAL_RS04905 () | 989666..990079 | + | 414 | WP_013032063.1 | hypothetical protein | - |
| NHAL_RS04910 () | 990085..990447 | + | 363 | WP_013032064.1 | DUF2190 family protein | - |
| NHAL_RS04915 () | 990447..990752 | + | 306 | WP_013032065.1 | hypothetical protein | - |
| NHAL_RS04920 () | 990745..991044 | + | 300 | WP_013032066.1 | hypothetical protein | - |
| NHAL_RS04925 () | 991044..991655 | + | 612 | WP_013032067.1 | phage tail protein | - |
| NHAL_RS04930 () | 991652..992092 | + | 441 | WP_013032068.1 | hypothetical protein | - |
| NHAL_RS20935 () | 992149..992310 | + | 162 | WP_013032069.1 | hypothetical protein | - |
| NHAL_RS04935 () | 992383..993129 | + | 747 | WP_013032070.1 | hypothetical protein | - |
| NHAL_RS04940 () | 993160..996453 | + | 3294 | WP_013032071.1 | phage tail length tape measure family protein | - |
| NHAL_RS04945 () | 996470..996802 | - | 333 | WP_013032072.1 | helix-turn-helix transcriptional regulator | - |
| NHAL_RS20155 () | 996786..997040 | - | 255 | WP_013032073.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NHAL_RS04955 () | 997110..997493 | + | 384 | WP_013032074.1 | hypothetical protein | - |
| NHAL_RS04960 () | 997494..1000835 | + | 3342 | WP_013032075.1 | hypothetical protein | - |
| NHAL_RS19660 () | 1000832..1001926 | + | 1095 | WP_013032076.1 | hypothetical protein | - |
| NHAL_RS04970 () | 1001923..1002213 | + | 291 | WP_013032077.1 | hypothetical protein | - |
| NHAL_RS04975 () | 1002210..1002599 | + | 390 | WP_013032078.1 | hypothetical protein | - |
| NHAL_RS19665 () | 1002603..1004579 | + | 1977 | WP_013032079.1 | hypothetical protein | - |
| NHAL_RS04985 () | 1004576..1004803 | + | 228 | WP_013032080.1 | hypothetical protein | - |
| NHAL_RS04990 () | 1004888..1005184 | - | 297 | WP_013032081.1 | hypothetical protein | - |
| NHAL_RS04995 () | 1005207..1005716 | - | 510 | WP_013032082.1 | DUF4124 domain-containing protein | - |
| NHAL_RS19670 () | 1005821..1006843 | - | 1023 | WP_013032083.1 | phage antirepressor N-terminal domain-containing protein | - |
| NHAL_RS20815 () | 1007415..1007585 | + | 171 | WP_013032084.1 | IS630 family transposase ISHsp2 | Transposase |
| NHAL_RS05005 () | 1007627..1008712 | - | 1086 | WP_157862624.1 | HNH endonuclease | - |
| NHAL_RS05010 () | 1008760..1009473 | - | 714 | WP_013032086.1 | OmpA family protein | - |
| NHAL_RS05015 () | 1009482..1011302 | - | 1821 | WP_013032087.1 | hypothetical protein | - |
| NHAL_RS05020 () | 1011281..1011667 | - | 387 | WP_013032088.1 | hypothetical protein | - |
| NHAL_RS05025 () | 1011835..1012608 | - | 774 | WP_013032089.1 | DCL family protein | - |
| NHAL_RS20160 () | 1012715..1012942 | - | 228 | WP_041355426.1 | carbon storage regulator | - |
| NHAL_RS05035 () | 1013666..1013881 | - | 216 | WP_013032092.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NHAL_RS05040 () | 1013892..1014077 | - | 186 | WP_013032093.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NHAL_RS05045 () | 1014284..1015216 | - | 933 | WP_013032094.1 | hypothetical protein | - |
| NHAL_RS05050 () | 1015316..1016038 | - | 723 | WP_013032095.1 | DUF2971 domain-containing protein | - |
| NHAL_RS20165 () | 1017255..1017434 | + | 180 | WP_083761359.1 | hypothetical protein | - |
| NHAL_RS19680 () | 1017766..1019913 | - | 2148 | WP_013032096.1 | bifunctional DNA primase/polymerase | - |
| NHAL_RS05070 () | 1019931..1020152 | - | 222 | WP_013032097.1 | AlpA family phage regulatory protein | - |
| NHAL_RS05075 () | 1020308..1021048 | - | 741 | WP_013032098.1 | hypothetical protein | - |
| NHAL_RS05080 () | 1021220..1021420 | - | 201 | WP_013032099.1 | DUF2283 domain-containing protein | - |
| NHAL_RS05085 () | 1021417..1021689 | - | 273 | WP_013032100.1 | DUF4258 domain-containing protein | - |
| NHAL_RS05090 () | 1021686..1022888 | - | 1203 | WP_013032101.1 | IS91 family transposase ISSde12 | Transposase |
| NHAL_RS05095 () | 1023493..1023930 | - | 438 | WP_013032103.1 | DUF29 domain-containing protein | - |
| NHAL_RS05100 () | 1024670..1026889 | + | 2220 | WP_013032104.1 | type I restriction-modification system subunit M | - |
| NHAL_RS05105 () | 1026886..1028121 | + | 1236 | WP_203434360.1 | restriction endonuclease subunit S | - |
| NHAL_RS05110 () | 1028118..1028825 | + | 708 | WP_013032106.1 | DUF3800 domain-containing protein | - |
| NHAL_RS05115 () | 1028822..1029307 | + | 486 | WP_013032107.1 | hypothetical protein | - |
| NHAL_RS19685 () | 1029594..1030049 | + | 456 | WP_013032108.1 | hypothetical protein | - |
| NHAL_RS05125 () | 1030091..1033252 | + | 3162 | Protein_1014 | HsdR family type I site-specific deoxyribonuclease | - |
| NHAL_RS05130 () | 1033236..1033973 | + | 738 | WP_203434388.1 | M48 family metallopeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|