MGE detailed information
MGE type: Prophage MGE length: 23052 bp
Accession: NC_013960 Location: 615715..638766 Organism: Nitrosococcus halophilus Nc 4 Replicon: chromosome
Accession: NC_013960 Location: 615715..638766 Organism: Nitrosococcus halophilus Nc 4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHAL_RS02935 () | 611408..612742 | + | 1335 | WP_013031677.1 | sigma-54 dependent transcriptional regulator | - |
| NHAL_RS02940 () | 612887..613300 | + | 414 | WP_013031678.1 | transposase | - |
| NHAL_RS20110 () | 613365..613523 | + | 159 | WP_013031679.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NHAL_RS02950 () | 613570..614133 | + | 564 | WP_013031680.1 | Uma2 family endonuclease | - |
| NHAL_RS02955 () | 614319..614648 | + | 330 | WP_013031681.1 | DUF4258 domain-containing protein | - |
| NHAL_RS02960 () | 614709..615164 | + | 456 | WP_203434353.1 | transcriptional regulator | - |
| NHAL_RS02965 () | 615201..615467 | + | 267 | WP_013031683.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NHAL_RS02970 () | 615464..615691 | + | 228 | Protein_588 | type II toxin-antitoxin system VapC family toxin | - |
| NHAL_RS02975 () | 615715..616098 | - | 384 | WP_013031685.1 | helix-turn-helix domain-containing protein | - |
| NHAL_RS02980 () | 616095..616352 | - | 258 | WP_013031686.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NHAL_RS02985 () | 616719..617210 | + | 492 | WP_013031687.1 | Fimbrial protein | VF |
| NHAL_RS02990 () | 617321..619285 | + | 1965 | WP_013031688.1 | hypothetical protein | - |
| NHAL_RS02995 () | 619444..620310 | + | 867 | WP_013031689.1 | glycosyltransferase family 2 protein | - |
| NHAL_RS03000 () | 620325..621587 | + | 1263 | WP_157862614.1 | GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase | VF |
| NHAL_RS03005 () | 622427..623551 | - | 1125 | WP_013031691.1 | glycosyltransferase family 4 protein | - |
| NHAL_RS20900 () | 623562..623714 | - | 153 | WP_157862473.1 | hypothetical protein | - |
| NHAL_RS03010 () | 623736..624836 | - | 1101 | WP_013031692.1 | UDP-galactopyranose mutase | VF |
| NHAL_RS19600 () | 624861..625901 | - | 1041 | WP_013031693.1 | O-antigen biosynthesis glycosyltransferase WbnJ | VF |
| NHAL_RS19605 () | 625898..626965 | - | 1068 | WP_013031694.1 | Putative glycosyltransferase EpsE | VF |
| NHAL_RS03025 () | 626965..627891 | - | 927 | WP_013031695.1 | sulfotransferase | - |
| NHAL_RS03030 () | 627982..628911 | - | 930 | WP_013031696.1 | sulfotransferase | - |
| NHAL_RS03035 () | 628902..630206 | - | 1305 | WP_013031697.1 | flippase | - |
| NHAL_RS03040 () | 631007..631276 | - | 270 | WP_013031698.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NHAL_RS03045 () | 631585..631812 | + | 228 | WP_013031699.1 | ribbon-helix-helix domain-containing protein | - |
| NHAL_RS03050 () | 631813..632022 | + | 210 | WP_013031700.1 | hypothetical protein | - |
| NHAL_RS03055 () | 632473..632871 | - | 399 | WP_013031701.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NHAL_RS03060 () | 632875..633063 | - | 189 | WP_013031702.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NHAL_RS03065 () | 633191..633616 | - | 426 | WP_013031703.1 | nucleotidyltransferase substrate binding protein | - |
| NHAL_RS03070 () | 633604..633955 | - | 352 | Protein_609 | nucleotidyltransferase domain-containing protein | - |
| NHAL_RS03075 () | 634089..634703 | + | 615 | WP_013031705.1 | IS607 family transposase ISCfe1 | Transposase |
| NHAL_RS03080 () | 634681..635835 | + | 1155 | WP_013031706.1 | IS607 family transposase ISCARN56 | Transposase |
| NHAL_RS03085 () | 636013..636324 | + | 312 | WP_013031708.1 | nucleotidyltransferase domain-containing protein | - |
| NHAL_RS03090 () | 636321..636596 | + | 276 | WP_203434354.1 | hypothetical protein | - |
| NHAL_RS03095 () | 636557..637780 | - | 1224 | WP_013031487.1 | IS256 family transposase ISSod18 | Transposase |
| NHAL_RS03100 () | 637894..638109 | + | 216 | WP_203434355.1 | hypothetical protein | - |
| NHAL_RS03105 () | 638203..638757 | - | 555 | Protein_616 | IS200-IS605 family transposase ISPa18 | Transposase |
| NHAL_RS03110 () | 638930..639178 | + | 249 | WP_013031709.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| NHAL_RS03115 () | 639178..639474 | + | 297 | WP_013031710.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NHAL_RS03125 () | 639992..640420 | + | 429 | WP_013031712.1 | DedA family protein | - |
| NHAL_RS03130 () | 640861..641157 | + | 297 | WP_013031713.1 | PepSY domain-containing protein | - |
| NHAL_RS03135 () | 641215..642564 | - | 1350 | WP_013031714.1 | MATE family efflux transporter | - |
| NHAL_RS03140 () | 642703..643608 | - | 906 | WP_013031715.1 | OmpA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|