MGE detailed information
MGE type: Genomic_island MGE length: 9441 bp
Accession: NC_013941 Location: 3897238..3906678 Organism: Escherichia coli O55:H7 str. CB9615 Replicon: chromosome
Accession: NC_013941 Location: 3897238..3906678 Organism: Escherichia coli O55:H7 str. CB9615 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G2583_RS19745 () | 3893070..3894401 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| G2583_RS19750 () | 3894423..3895412 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| G2583_RS19755 () | 3895511..3896449 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| G2583_RS31705 () | 3896764..3896982 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| G2583_RS19765 () | 3897238..3897777 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| G2583_RS19770 () | 3897799..3898986 | + | 1188 | WP_000484582.1 | YhaC family protein | - |
| G2583_RS19775 () | 3899502..3900647 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| G2583_RS19780 () | 3900744..3901634 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| G2583_RS19785 () | 3901664..3902434 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| G2583_RS19790 () | 3902450..3903784 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| G2583_RS19800 () | 3904159..3905730 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| G2583_RS19805 () | 3905879..3906214 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| G2583_RS19810 () | 3906214..3906678 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| G2583_RS19815 () | 3906733..3907542 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| G2583_RS19820 () | 3907791..3909071 | + | 1281 | WP_000681946.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| G2583_RS19825 () | 3909094..3909567 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| G2583_RS19830 () | 3909578..3910357 | + | 780 | WP_000406210.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| G2583_RS19835 () | 3910347..3911225 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| G2583_RS19840 () | 3911243..3911677 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |