MGE detailed information
MGE type: Prophage MGE length: 41948 bp
Accession: NC_013941 Location: 1732248..1774195 Organism: Escherichia coli O55:H7 str. CB9615 Replicon: chromosome
Accession: NC_013941 Location: 1732248..1774195 Organism: Escherichia coli O55:H7 str. CB9615 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G2583_RS08625 () | 1728298..1729281 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| G2583_RS31550 () | 1729556..1729726 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| G2583_RS08635 () | 1729759..1731132 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| G2583_RS08640 () | 1731261..1732196 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| G2583_RS28455 () | 1732248..1733483 | - | 1236 | WP_000040839.1 | Glycine--tRNA ligase beta subunit ; Integrase | Integrase |
| G2583_RS08650 () | 1733485..1733700 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| G2583_RS08655 () | 1733800..1733988 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1733804..1733982 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1733804..1733982 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1733804..1733982 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1733804..1733982 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| G2583_RS08660 () | 1734026..1734175 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| G2583_RS08665 () | 1734231..1735040 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| G2583_RS08670 () | 1735033..1737705 | - | 2673 | WP_000102213.1 | exodeoxyribonuclease VIII | - |
| G2583_RS08675 () | 1737805..1738080 | - | 276 | WP_001452559.1 | hypothetical protein | - |
| G2583_RS08680 () | 1738155..1738331 | - | 177 | WP_000245528.1 | hypothetical protein | - |
| G2583_RS08685 () | 1738325..1738546 | - | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| G2583_RS08690 () | 1738955..1739107 | - | 153 | WP_000379547.1 | DUF1391 family protein | - |
| G2583_RS08695 () | 1739425..1739901 | - | 477 | WP_000948458.1 | DNA-binding transcriptional repressor RacR | - |
| G2583_RS08700 () | 1740025..1740282 | + | 258 | WP_000712068.1 | transcriptional regulator | - |
| G2583_RS08705 () | 1740344..1740766 | + | 423 | WP_000693796.1 | hypothetical protein | - |
| G2583_RS08710 () | 1740844..1741632 | + | 789 | WP_013009175.1 | hypothetical protein | - |
| G2583_RS08715 () | 1741639..1742379 | + | 741 | WP_000789014.1 | IS21 family transposase ISCsa9 | Transposase |
| G2583_RS08720 () | 1742405..1743175 | + | 771 | WP_000450850.1 | DUF1627 domain-containing protein | - |
| G2583_RS08725 () | 1743191..1743586 | + | 396 | WP_001118161.1 | DUF977 family protein | - |
| G2583_RS08730 () | 1743643..1744227 | + | 585 | WP_000206794.1 | DUF551 domain-containing protein | - |
| G2583_RS30180 () | 1744343..1744447 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| G2583_RS08735 () | 1744693..1744848 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G2583_RS08740 () | 1745409..1746008 | + | 600 | WP_000940306.1 | DUF1367 family protein | - |
| G2583_RS08745 () | 1746008..1746298 | + | 291 | WP_000228035.1 | DUF1364 domain-containing protein | - |
| G2583_RS08750 () | 1746295..1746849 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| G2583_RS08770 () | 1747771..1749717 | + | 1947 | WP_000874263.1 | DUF1737 domain-containing protein | - |
| G2583_RS08775 () | 1749855..1750034 | + | 180 | WP_014640514.1 | DUF1378 family protein | - |
| G2583_RS08780 () | 1750075..1750347 | + | 273 | WP_001290217.1 | DUF826 domain-containing protein | - |
| G2583_RS08785 () | 1750424..1750639 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| G2583_RS08790 () | 1750644..1751177 | + | 534 | WP_000087714.1 | lysozyme | - |
| G2583_RS08795 () | 1751452..1752021 | + | 570 | WP_001056883.1 | hypothetical protein | - |
| G2583_RS31055 () | 1752021..1752170 | + | 150 | WP_000455406.1 | hypothetical protein | - |
| G2583_RS31060 () | 1752398..1752604 | + | 207 | WP_123005736.1 | lysis system o-spanin lipoprotein Rz1 | - |
| G2583_RS31065 () | 1752633..1752785 | + | 153 | WP_001139680.1 | hypothetical protein | - |
| G2583_RS08815 () | 1752864..1753151 | + | 288 | WP_000343114.1 | hypothetical protein | - |
| G2583_RS31555 () | 1753228..1753404 | - | 177 | WP_171815854.1 | hypothetical protein | - |
| G2583_RS08825 () | 1753665..1754141 | + | 477 | WP_000373410.1 | DUF1441 family protein | - |
| G2583_RS08830 () | 1754138..1756261 | + | 2124 | WP_001077622.1 | phage terminase large subunit family protein | - |
| G2583_RS08835 () | 1756258..1756470 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| G2583_RS08840 () | 1756470..1757972 | + | 1503 | WP_000974545.1 | phage portal protein | - |
| G2583_RS08845 () | 1757917..1759941 | + | 2025 | WP_001114424.1 | Signal transduction histidine-protein kinase BarA | VF |
| G2583_RS08850 () | 1760029..1760355 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| G2583_RS08855 () | 1760348..1760629 | + | 282 | WP_001281348.1 | DNA breaking-rejoining protein | - |
| G2583_RS08860 () | 1760632..1761255 | + | 624 | WP_000974958.1 | phage tail protein | - |
| G2583_RS08865 () | 1761268..1761666 | + | 399 | WP_000682716.1 | tail protein | - |
| G2583_RS08870 () | 1761674..1762426 | + | 753 | WP_000235038.1 | Ig domain-containing protein | - |
| G2583_RS08875 () | 1762440..1762862 | + | 423 | WP_000479043.1 | phage minor tail protein G | - |
| G2583_RS08880 () | 1762889..1763197 | + | 309 | WP_000532073.1 | phage tail assembly protein T | - |
| G2583_RS08885 () | 1763241..1765886 | + | 2646 | WP_000918245.1 | phage tail tape measure protein | - |
| G2583_RS08890 () | 1765883..1766212 | + | 330 | WP_000847280.1 | phage tail protein | - |
| G2583_RS08895 () | 1766212..1766910 | + | 699 | WP_013009178.1 | phage minor tail protein L | - |
| G2583_RS08900 () | 1766921..1767664 | + | 744 | WP_024201844.1 | C40 family peptidase | - |
| G2583_RS08905 () | 1767610..1768242 | + | 633 | WP_143714090.1 | tail assembly protein | - |
| G2583_RS08910 () | 1768490..1771963 | + | 3474 | WP_000514801.1 | host specificity protein J | - |
| G2583_RS08915 () | 1772031..1772630 | + | 600 | WP_001253753.1 | hypothetical protein | VF |
| G2583_RS08920 () | 1772695..1773924 | + | 1230 | WP_000279066.1 | prophage tail fiber N-terminal domain-containing protein | - |
| G2583_RS08925 () | 1773926..1774195 | + | 270 | WP_001023994.1 | phage tail fiber C-terminal domain-containing protein | - |
| G2583_RS08930 () | 1774308..1774883 | + | 576 | WP_001131657.1 | DUF1076 domain-containing protein | - |
| G2583_RS30200 () | 1774956..1775585 | + | 630 | WP_013009182.1 | DUF1076 domain-containing protein | - |
| G2583_RS08940 () | 1775667..1776308 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| G2583_RS08945 () | 1777249..1777683 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| G2583_RS08950 () | 1777824..1778957 | - | 1134 | WP_000837948.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|