MGE detailed information
MGE type: Prophage MGE length: 37709 bp
Accession: NC_013893 Location: 2312214..2349922 Organism: Staphylococcus lugdunensis HKU09-01 Replicon: chromosome
Accession: NC_013893 Location: 2312214..2349922 Organism: Staphylococcus lugdunensis HKU09-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLGD_RS10930 () | 2307735..2309033 | - | 1299 | WP_002479424.1 | HD domain-containing protein | - |
| SLGD_RS10935 () | 2309099..2309578 | - | 480 | WP_002459873.1 | GNAT family N-acetyltransferase | - |
| SLGD_RS10940 () | 2309764..2310309 | - | 546 | WP_002479425.1 | flavodoxin family protein | - |
| SLGD_RS10945 () | 2310495..2311433 | - | 939 | WP_002459875.1 | aldo/keto reductase | - |
| SLGD_RS10950 () | 2311588..2312010 | + | 423 | WP_002459876.1 | Rrf2 family transcriptional regulator | - |
| SLGD_RS12950 () | 2312015..2312152 | + | 138 | Protein_2135 | FAD-binding protein | - |
| SLGD_RS13165 () | 2312214..2312555 | - | 342 | WP_141750738.1 | hypothetical protein | - |
| SLGD_RS10960 () | 2312837..2313112 | - | 276 | WP_041612455.1 | hypothetical protein | - |
| SLGD_RS10965 () | 2313306..2314772 | - | 1467 | WP_012990961.1 | SH3 domain-containing protein | - |
| SLGD_RS10970 () | 2314775..2315224 | - | 450 | WP_012990962.1 | phage holin | - |
| SLGD_RS10975 () | 2315281..2317842 | - | 2562 | WP_012990963.1 | BppU family phage baseplate upper protein | - |
| SLGD_RS10980 () | 2317990..2318286 | - | 297 | WP_012990964.1 | DUF2951 family protein | - |
| SLGD_RS13275 () | 2318319..2318465 | - | 147 | WP_012990965.1 | hypothetical protein | - |
| SLGD_RS12615 () | 2318462..2320645 | - | 2184 | WP_012990966.1 | phage tail protein | - |
| SLGD_RS10990 () | 2320664..2321761 | - | 1098 | WP_012990967.1 | hypothetical protein | - |
| SLGD_RS10995 () | 2321778..2322731 | - | 954 | WP_012990968.1 | phage tail family protein | - |
| SLGD_RS12620 () | 2322752..2326414 | - | 3663 | WP_012990969.1 | phage tail length tape measure protein | - |
| SLGD_RS11015 () | 2326421..2326786 | - | 366 | WP_012990970.1 | hypothetical protein | - |
| SLGD_RS11020 () | 2326831..2327196 | - | 366 | WP_012990971.1 | tail assembly chaperone | - |
| SLGD_RS11025 () | 2327271..2327834 | - | 564 | WP_012990972.1 | phage major tail protein, TP901-1 family | - |
| SLGD_RS11030 () | 2327852..2328238 | - | 387 | WP_012990973.1 | hypothetical protein | - |
| SLGD_RS11035 () | 2328249..2328590 | - | 342 | WP_012990974.1 | HK97 gp10 family phage protein | - |
| SLGD_RS11040 () | 2328590..2328892 | - | 303 | WP_041612461.1 | hypothetical protein | - |
| SLGD_RS11045 () | 2328889..2329218 | - | 330 | WP_012990976.1 | phage head-tail connector protein | - |
| SLGD_RS11050 () | 2329228..2329467 | - | 240 | WP_012990977.1 | hypothetical protein | - |
| SLGD_RS11055 () | 2329482..2330387 | - | 906 | WP_012990978.1 | hypothetical protein | - |
| SLGD_RS11060 () | 2330407..2330997 | - | 591 | WP_012990979.1 | DUF4355 domain-containing protein | - |
| SLGD_RS13170 () | 2330982..2331090 | - | 109 | Protein_2157 | hypothetical protein | - |
| SLGD_RS11065 () | 2331316..2332281 | - | 966 | WP_012990982.1 | minor capsid protein | - |
| SLGD_RS11070 () | 2332268..2333719 | - | 1452 | WP_012990983.1 | phage portal protein | - |
| SLGD_RS11075 () | 2333731..2335005 | - | 1275 | WP_012990984.1 | PBSX family phage terminase large subunit | - |
| SLGD_RS11080 () | 2334992..2335420 | - | 429 | WP_012990985.1 | hypothetical protein | - |
| SLGD_RS11085 () | 2335722..2336138 | - | 417 | WP_012990986.1 | hypothetical protein | - |
| SLGD_RS13280 () | 2336135..2336284 | - | 150 | WP_012990987.1 | hypothetical protein | - |
| SLGD_RS11090 () | 2336281..2336463 | - | 183 | WP_012990988.1 | hypothetical protein | - |
| SLGD_RS13175 () | 2336456..2336605 | - | 150 | WP_012990989.1 | DUF1381 domain-containing protein | - |
| SLGD_RS11095 () | 2336645..2337172 | - | 528 | WP_012990990.1 | dUTPase | - |
| SLGD_RS12955 () | 2337193..2337324 | - | 132 | Protein_2167 | DUF1024 family protein | - |
| SLGD_RS11100 () | 2337328..2337750 | - | 423 | WP_012990992.1 | DUF3310 domain-containing protein | - |
| SLGD_RS11105 () | 2337756..2338007 | - | 252 | WP_012990993.1 | hypothetical protein | - |
| SLGD_RS11110 () | 2338010..2338324 | - | 315 | WP_012990994.1 | hypothetical protein | - |
| SLGD_RS11115 () | 2338324..2338728 | - | 405 | WP_012990995.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SLGD_RS11120 () | 2338737..2338979 | - | 243 | WP_012990996.1 | hypothetical protein | - |
| SLGD_RS11125 () | 2338969..2339196 | - | 228 | WP_041612463.1 | hypothetical protein | - |
| SLGD_RS11130 () | 2339193..2340428 | - | 1236 | WP_012990998.1 | AAA family ATPase | - |
| SLGD_RS11135 () | 2340421..2340780 | - | 360 | WP_002478869.1 | hypothetical protein | - |
| SLGD_RS12960 () | 2340780..2341571 | - | 792 | Protein_2176 | phage replisome organizer N-terminal domain-containing protein | - |
| SLGD_RS11150 () | 2341649..2342089 | - | 441 | WP_012991001.1 | single-stranded DNA-binding protein | - |
| SLGD_RS11155 () | 2342086..2342760 | - | 675 | WP_012991002.1 | ERF family protein | - |
| SLGD_RS11160 () | 2342761..2343246 | - | 486 | WP_012991003.1 | siphovirus Gp157 family protein | - |
| SLGD_RS11165 () | 2343315..2343494 | - | 180 | WP_041612466.1 | hypothetical protein | - |
| SLGD_RS11170 () | 2343722..2344324 | + | 603 | WP_012991005.1 | hypothetical protein | - |
| SLGD_RS11175 () | 2344370..2345122 | - | 753 | WP_012991006.1 | phage antirepressor KilAC domain-containing protein | - |
| SLGD_RS11180 () | 2345130..2345423 | + | 294 | WP_049823122.1 | hypothetical protein | - |
| SLGD_RS13285 () | 2345416..2345577 | - | 162 | WP_012991008.1 | hypothetical protein | - |
| SLGD_RS11185 () | 2345593..2345829 | - | 237 | WP_012991009.1 | helix-turn-helix domain-containing protein | - |
| SLGD_RS11190 () | 2345981..2346295 | + | 315 | WP_012991010.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SLGD_RS11195 () | 2346307..2346771 | + | 465 | WP_012991011.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| SLGD_RS13290 () | 2346819..2346962 | + | 144 | WP_012991012.1 | hypothetical protein | - |
| SLGD_RS11200 () | 2347095..2347277 | + | 183 | WP_012991013.1 | hypothetical protein | - |
| SLGD_RS11205 () | 2347431..2348471 | + | 1041 | WP_012991014.1 | Abi family protein | - |
| SLGD_RS11210 () | 2348540..2349922 | + | 1383 | WP_012991015.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| SLGD_RS11215 () | 2349952..2351142 | + | 1191 | Protein_2192 | FAD-dependent oxidoreductase | - |
| SLGD_RS11220 () | 2351476..2351817 | - | 342 | WP_002479428.1 | DUF1450 domain-containing protein | - |
| SLGD_RS11225 () | 2351983..2353059 | - | 1077 | WP_002459879.1 | phosphomevalonate kinase | - |
| SLGD_RS11230 () | 2353072..2354055 | - | 984 | WP_002459880.1 | diphosphomevalonate decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|