MGE detailed information
MGE type: Prophage MGE length: 25498 bp
Accession: NC_013893 Location: 2076197..2101694 Organism: Staphylococcus lugdunensis HKU09-01 Replicon: chromosome
Accession: NC_013893 Location: 2076197..2101694 Organism: Staphylococcus lugdunensis HKU09-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLGD_RS09740 () | 2071337..2072254 | - | 918 | WP_002479301.1 | zinc ABC transporter substrate-binding protein | - |
| SLGD_RS13140 () | 2072768..2073061 | - | 294 | WP_002459631.1 | hypothetical protein | - |
| SLGD_RS13255 () | 2073018..2073113 | - | 96 | WP_187286353.1 | DUF3102 domain-containing protein | - |
| SLGD_RS09750 () | 2073309..2073752 | - | 444 | WP_002459632.1 | protein-export chaperone SecB | - |
| SLGD_RS09755 () | 2073752..2074048 | - | 297 | WP_002459633.1 | hypothetical protein | - |
| SLGD_RS09760 () | 2074069..2074641 | - | 573 | WP_002459634.1 | hypothetical protein | - |
| SLGD_RS09765 () | 2075831..2076178 | - | 348 | WP_002447711.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| SLGD_RS09770 () | 2076197..2076814 | - | 618 | WP_002455892.1 | CadD family cadmium resistance transporter | - |
| SLGD_RS12910 () | 2076955..2077144 | - | 190 | Protein_1898 | hypothetical protein | - |
| SLGD_RS09775 () | 2077277..2077849 | - | 573 | WP_012990917.1 | terminase small subunit | - |
| SLGD_RS09780 () | 2077846..2078082 | - | 237 | Protein_1900 | pathogenicity island family protein | - |
| SLGD_RS09785 () | 2078075..2078596 | - | 522 | WP_012990918.1 | hypothetical protein | - |
| SLGD_RS09790 () | 2078607..2078840 | - | 234 | WP_012990919.1 | hypothetical protein | - |
| SLGD_RS09795 () | 2078854..2079195 | - | 342 | WP_012990920.1 | hypothetical protein | - |
| SLGD_RS09800 () | 2079542..2080183 | - | 642 | WP_012990921.1 | hypothetical protein | - |
| SLGD_RS09805 () | 2080180..2080464 | - | 285 | WP_012990922.1 | hypothetical protein | - |
| SLGD_RS09810 () | 2080466..2080828 | - | 363 | WP_012990923.1 | hypothetical protein | - |
| SLGD_RS09815 () | 2081114..2082583 | - | 1470 | WP_012990924.1 | virulence-associated E family protein | - |
| SLGD_RS09820 () | 2082600..2083469 | - | 870 | WP_012990925.1 | primase alpha helix C-terminal domain-containing protein | - |
| SLGD_RS09825 () | 2083536..2083862 | - | 327 | WP_012990926.1 | DUF1474 family protein | Toxin Detail |
| SLGD_RS09830 () | 2083865..2084074 | - | 210 | WP_001058492.1 | hypothetical protein | Antitoxin Detail |
| SLGD_RS09835 () | 2084067..2084213 | - | 147 | WP_012990927.1 | hypothetical protein | - |
| SLGD_RS09840 () | 2084225..2084497 | - | 273 | WP_012990928.1 | helix-turn-helix domain-containing protein | - |
| SLGD_RS09845 () | 2084498..2084710 | - | 213 | WP_012990929.1 | hypothetical protein | VF |
| SLGD_RS09850 () | 2084854..2085555 | + | 702 | WP_012990930.1 | helix-turn-helix domain-containing protein | - |
| SLGD_RS09855 () | 2085570..2086790 | + | 1221 | WP_012990931.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SLGD_RS09860 () | 2086933..2087745 | - | 813 | WP_002459651.1 | Methionine-binding lipoprotein MetQ | VF |
| SLGD_RS09865 () | 2087767..2088462 | - | 696 | WP_002479302.1 | ABC transporter permease | - |
| SLGD_RS09870 () | 2088455..2089480 | - | 1026 | WP_002479303.1 | Methionine import ATP-binding protein MetN 2 | VF |
| SLGD_RS09875 () | 2089729..2090028 | - | 300 | WP_002459654.1 | thioredoxin family protein | - |
| SLGD_RS09880 () | 2090021..2090407 | - | 387 | WP_002479304.1 | toprim domain-containing protein | - |
| SLGD_RS09885 () | 2090630..2091010 | - | 381 | WP_002459656.1 | glycine cleavage system protein GcvH | - |
| SLGD_RS09890 () | 2091135..2091491 | - | 357 | WP_002479305.1 | arsenate reductase family protein | - |
| SLGD_RS09895 () | 2091634..2091957 | + | 324 | WP_002459658.1 | thioredoxin family protein | - |
| SLGD_RS09900 () | 2092010..2092549 | - | 540 | WP_002479306.1 | nitroreductase | - |
| SLGD_RS09905 () | 2092612..2093343 | - | 732 | WP_002459660.1 | type I 3-dehydroquinate dehydratase | - |
| SLGD_RS09910 () | 2093486..2093908 | + | 423 | WP_002459661.1 | organic hydroperoxide resistance protein | - |
| SLGD_RS09915 () | 2094216..2094725 | + | 510 | WP_002479307.1 | GNAT family N-acetyltransferase | - |
| SLGD_RS09920 () | 2094951..2095535 | - | 585 | WP_012990932.1 | phosphoglycerate mutase family protein | - |
| SLGD_RS09925 () | 2095771..2096013 | + | 243 | WP_002459664.1 | hypothetical protein | - |
| SLGD_RS09930 () | 2096005..2096208 | - | 204 | WP_002459665.1 | hypothetical protein | - |
| SLGD_RS09935 () | 2096656..2096844 | + | 189 | WP_002459666.1 | hypothetical protein | - |
| SLGD_RS09940 () | 2097091..2097654 | + | 564 | WP_002479309.1 | hypothetical protein | - |
| SLGD_RS13260 () | 2097821..2098057 | - | 237 | WP_012990933.1 | hypothetical protein | - |
| SLGD_RS09950 () | 2098516..2099256 | + | 741 | WP_002459670.1 | poly-gamma-glutamate hydrolase family protein | - |
| SLGD_RS09955 () | 2099347..2099631 | + | 285 | WP_002479310.1 | hypothetical protein | - |
| SLGD_RS09960 () | 2099668..2099886 | + | 219 | WP_002459672.1 | hypothetical protein | - |
| SLGD_RS09965 () | 2099985..2100341 | + | 357 | WP_002479311.1 | DoxX family protein | - |
| SLGD_RS09970 () | 2100440..2100859 | - | 420 | WP_002479312.1 | FosB/FosD family fosfomycin resistance bacillithiol transferase | - |
| SLGD_RS09975 () | 2101287..2101694 | - | 408 | WP_002479313.1 | YjdF family protein | - |
| SLGD_RS09980 () | 2101966..2102529 | + | 564 | WP_002479314.1 | TIGR00730 family Rossman fold protein | - |
| SLGD_RS09985 () | 2102676..2103329 | - | 654 | WP_002479315.1 | hypothetical protein | - |
| SLGD_RS09990 () | 2103424..2105226 | - | 1803 | WP_002479316.1 | metallophosphoesterase family protein | - |
| SLGD_RS09995 () | 2105625..2106404 | - | 780 | WP_080513647.1 | tandem-type lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|