MGE detailed information
MGE type: Prophage MGE length: 17280 bp
Accession: NC_013892 Location: 4179285..4196564 Organism: Xenorhabdus bovienii SS-2004 Replicon: chromosome
Accession: NC_013892 Location: 4179285..4196564 Organism: Xenorhabdus bovienii SS-2004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XBJ1_RS18660 () | 4174624..4175034 | - | 411 | WP_012990592.1 | hypothetical protein | - |
| XBJ1_RS18665 () | 4175239..4176354 | - | 1116 | WP_012990593.1 | glycosyltransferase family 4 protein | - |
| XBJ1_RS18670 () | 4176517..4176684 | - | 168 | WP_012990594.1 | 50S ribosomal protein L33 | - |
| XBJ1_RS18675 () | 4176696..4176932 | - | 237 | WP_012990595.1 | 50S ribosomal protein L28 | - |
| XBJ1_RS18680 () | 4177180..4177872 | - | 693 | WP_012990597.1 | DNA repair protein RadC | - |
| XBJ1_RS18685 () | 4178078..4179307 | + | 1230 | WP_012990598.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| XBJ1_RS18690 () | 4179285..4179743 | + | 459 | WP_012990599.1 | dUTP diphosphatase | - |
| XBJ1_RS18695 () | 4179856..4180455 | + | 600 | WP_012990600.1 | nucleoid occlusion factor SlmA | - |
| XBJ1_RS18700 () | 4180681..4181322 | - | 642 | WP_012990601.1 | orotate phosphoribosyltransferase | - |
| XBJ1_RS18705 () | 4181411..4182139 | - | 729 | WP_012990602.1 | ribonuclease PH | - |
| XBJ1_RS18710 () | 4182265..4183128 | + | 864 | WP_012990603.1 | YicC family protein | - |
| XBJ1_RS18715 () | 4183317..4184588 | + | 1272 | WP_041573284.1 | site-specific integrase | - |
| XBJ1_RS18720 () | 4184585..4185322 | + | 738 | WP_012990605.1 | hypothetical protein | - |
| XBJ1_RS18725 () | 4185728..4185970 | + | 243 | WP_012990606.1 | AlpA family phage regulatory protein | - |
| XBJ1_RS18730 () | 4186105..4186944 | + | 840 | WP_012990607.1 | hypothetical protein | - |
| XBJ1_RS18735 () | 4186965..4187984 | + | 1020 | WP_012990608.1 | P2 family phage major capsid protein | - |
| XBJ1_RS18740 () | 4187981..4188502 | + | 522 | WP_012990609.1 | GPO family capsid scaffolding protein | - |
| XBJ1_RS18745 () | 4188574..4189086 | + | 513 | WP_038199639.1 | host cell division inhibitor Icd-like protein | - |
| XBJ1_RS18750 () | 4189089..4189307 | + | 219 | WP_012990611.1 | hypothetical protein | - |
| XBJ1_RS18755 () | 4189307..4192021 | + | 2715 | WP_012990612.1 | TOPRIM and DUF927 domain-containing protein | - |
| XBJ1_RS20370 () | 4192313..4192525 | + | 213 | WP_012990613.1 | ogr/Delta-like zinc finger family protein | - |
| XBJ1_RS18760 () | 4193138..4193359 | + | 222 | WP_012990615.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| XBJ1_RS18765 () | 4193356..4193754 | + | 399 | WP_010847655.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| XBJ1_RS21835 () | 4194252..4194416 | + | 165 | WP_012990616.1 | hypothetical protein | - |
| XBJ1_RS18775 () | 4194644..4195468 | + | 825 | WP_012990617.1 | DNA damage-inducible protein D | - |
| XBJ1_RS18780 () | 4195823..4196212 | + | 390 | Protein_3750 | DUF4102 domain-containing protein | - |
| XBJ1_RS18785 () | 4196343..4196564 | + | 222 | WP_012990619.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| XBJ1_RS18790 () | 4196712..4198124 | - | 1413 | WP_012990620.1 | MFS transporter | - |
| XBJ1_RS18795 () | 4198219..4198875 | + | 657 | WP_012990621.1 | transcriptional regulator | - |
| XBJ1_RS18800 () | 4198938..4199861 | - | 924 | WP_012990622.1 | ribokinase | - |
| XBJ1_RS18805 () | 4199858..4201258 | - | 1401 | WP_012990623.1 | cytosine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|