MGE detailed information
MGE type: Prophage MGE length: 45146 bp
Accession: NC_013892 Location: 2743923..2789068 Organism: Xenorhabdus bovienii SS-2004 Replicon: chromosome
Accession: NC_013892 Location: 2743923..2789068 Organism: Xenorhabdus bovienii SS-2004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XBJ1_RS11710 () | 2739462..2740499 | + | 1038 | WP_041573280.1 | IS630 family transposase | - |
| XBJ1_RS11715 () | 2740510..2740881 | - | 372 | WP_012989175.1 | hypothetical protein | - |
| XBJ1_RS11720 () | 2741028..2741441 | - | 414 | WP_012989176.1 | hypothetical protein | - |
| XBJ1_RS11725 () | 2741844..2742518 | + | 675 | WP_012989177.1 | hypothetical protein | - |
| XBJ1_RS11730 () | 2742725..2742946 | + | 222 | WP_012989178.1 | hypothetical protein | - |
| XBJ1_RS11735 () | 2742915..2743838 | - | 924 | WP_012989179.1 | DMT family transporter | - |
| XBJ1_RS11740 () | 2743923..2744891 | + | 969 | WP_143827676.1 | LysR family transcriptional regulator | - |
| XBJ1_RS11745 () | 2744991..2745485 | - | 495 | WP_012989181.1 | GNAT family N-acetyltransferase | - |
| XBJ1_RS11750 () | 2745628..2746035 | + | 408 | WP_012989182.1 | DUF4440 domain-containing protein | - |
| XBJ1_RS11755 () | 2746089..2747495 | - | 1407 | WP_012989183.1 | D-serine/D-alanine/glycine transporter | - |
| XBJ1_RS11760 () | 2747707..2748051 | - | 345 | WP_012989184.1 | hypothetical protein | - |
| XBJ1_RS11765 () | 2748063..2749208 | - | 1146 | WP_012989185.1 | N-acetyltransferase | - |
| XBJ1_RS11770 () | 2749202..2749996 | - | 795 | WP_012989186.1 | class I SAM-dependent methyltransferase | - |
| XBJ1_RS21490 () | 2750168..2750307 | + | 140 | Protein_2379 | IS6 family transposase | - |
| XBJ1_RS22025 () | 2750698..2750790 | - | 93 | Protein_2380 | IS6 family transposase | - |
| XBJ1_RS19965 () | 2751011..2751351 | + | 341 | Protein_2381 | helix-turn-helix domain-containing protein | - |
| XBJ1_RS19970 () | 2752228..2752419 | + | 192 | WP_158304287.1 | hypothetical protein | - |
| XBJ1_RS11775 () | 2752342..2753028 | - | 687 | WP_012989191.1 | winged helix-turn-helix domain-containing protein | - |
| XBJ1_RS11780 () | 2753275..2753931 | + | 657 | Protein_2384 | IS4 family transposase | - |
| XBJ1_RS11795 () | 2755369..2756007 | + | 639 | Protein_2386 | transposase | - |
| XBJ1_RS11800 () | 2756188..2756952 | - | 765 | WP_012989197.1 | hypothetical protein | - |
| XBJ1_RS11805 () | 2757834..2758112 | + | 279 | WP_173346397.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| XBJ1_RS11810 () | 2758109..2758465 | + | 357 | WP_012989201.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| XBJ1_RS22100 () | 2758976..2759230 | - | 255 | Protein_2390 | lysis protein | - |
| XBJ1_RS22105 () | 2759234..2759638 | - | 405 | Protein_2391 | lysozyme | - |
| XBJ1_RS11825 () | 2759653..2760633 | + | 981 | WP_012989205.1 | tyrosine-type recombinase/integrase | - |
| XBJ1_RS11830 () | 2762156..2763193 | + | 1038 | WP_041573280.1 | IS630 family transposase | - |
| XBJ1_RS11835 () | 2763413..2764330 | + | 918 | WP_012989206.1 | hypothetical protein | - |
| XBJ1_RS11840 () | 2764592..2765464 | + | 873 | WP_012989207.1 | HNH endonuclease | - |
| XBJ1_RS11845 () | 2765896..2766438 | - | 543 | WP_012989208.1 | chorismate mutase | - |
| XBJ1_RS11850 () | 2766590..2767346 | + | 757 | Protein_2397 | IS5 family transposase | - |
| XBJ1_RS11855 () | 2767441..2768400 | - | 960 | WP_038199014.1 | hypothetical protein | - |
| XBJ1_RS19985 () | 2768912..2769007 | + | 96 | Protein_2399 | phage tail protein | - |
| XBJ1_RS11865 () | 2769146..2769586 | + | 441 | WP_012989214.1 | lysis protein | - |
| XBJ1_RS11870 () | 2769615..2769986 | + | 372 | WP_012989215.1 | hypothetical protein | - |
| XBJ1_RS11875 () | 2770765..2771136 | - | 372 | WP_012989218.1 | galactose-binding lectin | - |
| XBJ1_RS20870 () | 2771890..2772189 | - | 300 | Protein_2403 | tail fiber protein | - |
| XBJ1_RS20875 () | 2772242..2772926 | + | 685 | Protein_2404 | IS1 family transposase | - |
| XBJ1_RS11890 () | 2773310..2773834 | + | 525 | Protein_2405 | hypothetical protein | - |
| XBJ1_RS20010 () | 2775710..2775862 | + | 153 | WP_143827679.1 | hypothetical protein | - |
| XBJ1_RS11900 () | 2775986..2777094 | - | 1109 | Protein_2408 | phage integrase Arm DNA-binding domain-containing protein | - |
| XBJ1_RS11905 () | 2777428..2777700 | + | 273 | WP_012989223.1 | hypothetical protein | - |
| XBJ1_RS11910 () | 2777779..2778054 | - | 276 | WP_012989224.1 | hypothetical protein | - |
| XBJ1_RS11915 () | 2778269..2778580 | + | 312 | WP_012989225.1 | tyrosine-type recombinase/integrase | - |
| XBJ1_RS11920 () | 2778704..2779957 | - | 1254 | WP_012989226.1 | NADP-dependent isocitrate dehydrogenase | - |
| XBJ1_RS11925 () | 2780099..2780728 | + | 630 | WP_038199019.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| XBJ1_RS11930 () | 2780721..2781173 | + | 453 | WP_012989228.1 | NUDIX hydrolase | - |
| XBJ1_RS11935 () | 2781283..2782386 | + | 1104 | WP_012989229.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| XBJ1_RS11940 () | 2782389..2783015 | + | 627 | WP_012989230.1 | high frequency lysogenization protein HflD | - |
| XBJ1_RS11945 () | 2783039..2784409 | + | 1371 | WP_012989231.1 | adenylosuccinate lyase | - |
| XBJ1_RS11950 () | 2784707..2785390 | + | 684 | WP_012989233.1 | two-component system response regulator PhoP | - |
| XBJ1_RS11955 () | 2785383..2786840 | + | 1458 | WP_173346419.1 | two-component system sensor histidine kinase PhoQ | - |
| XBJ1_RS11960 () | 2786937..2788058 | + | 1122 | WP_012989235.1 | cupin domain-containing protein | - |
| XBJ1_RS11965 () | 2788238..2789068 | - | 831 | WP_038199021.1 | NAD-dependent protein deacylase | - |
| XBJ1_RS11970 () | 2789234..2790481 | - | 1248 | WP_012989237.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| XBJ1_RS11975 () | 2790481..2791182 | - | 702 | WP_038199022.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| XBJ1_RS11980 () | 2791175..2792377 | - | 1203 | WP_038199024.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|