MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 162935 bp
Accession: NC_013592 Location: 1507162..1670096 Organism: Dickeya dadantii Ech586 Replicon: chromosome
Accession: NC_013592 Location: 1507162..1670096 Organism: Dickeya dadantii Ech586 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD586_RS06720 () | 1503100..1505301 | - | 2202 | WP_012884057.1 | catalase/peroxidase HPI | - |
| DD586_RS06725 () | 1505831..1507531 | + | 1701 | WP_012884058.1 | peptidoglycan glycosyltransferase FtsI | - |
| DD586_RS06730 () | 1507780..1508577 | + | 798 | WP_012884059.1 | class I SAM-dependent methyltransferase | - |
| DD586_RS06735 () | 1508683..1510257 | + | 1575 | WP_095522550.1 | nickel ABC transporter substrate-binding protein | - |
| DD586_RS06740 () | 1510329..1511264 | + | 936 | WP_012884061.1 | ABC transporter permease subunit | - |
| DD586_RS06745 () | 1511261..1512118 | + | 858 | WP_012884062.1 | ABC transporter permease subunit | - |
| DD586_RS06750 () | 1512115..1512927 | + | 813 | WP_012884063.1 | Dipeptide transport ATP-binding protein DppD | VF |
| DD586_RS06755 () | 1512931..1513692 | + | 762 | WP_012884064.1 | putative ABC transporter ATP-binding protein YejF | VF |
| DD586_RS06760 () | 1513891..1514364 | + | 474 | WP_012884065.1 | MarR family transcriptional regulator | - |
| DD586_RS06765 () | 1514379..1515551 | + | 1173 | WP_012884066.1 | putative multidrug resistance protein EmrK | VF |
| DD586_RS06770 () | 1515562..1517088 | + | 1527 | WP_041164340.1 | Multidrug export protein EmrB | VF |
| DD586_RS06775 () | 1517163..1518062 | + | 900 | WP_012884068.1 | helix-turn-helix domain-containing protein | - |
| DD586_RS06780 () | 1518210..1518695 | + | 486 | WP_012884069.1 | DUF2501 domain-containing protein | - |
| DD586_RS06785 () | 1518806..1519396 | - | 591 | WP_012884070.1 | flavin reductase family protein | - |
| DD586_RS06790 () | 1519739..1520071 | + | 333 | WP_012884071.1 | DUF1971 domain-containing protein | - |
| DD586_RS06795 () | 1520082..1520420 | + | 339 | WP_012884072.1 | DUF1869 domain-containing protein | - |
| DD586_RS06800 () | 1520579..1520944 | - | 366 | WP_157668916.1 | hypothetical protein | - |
| DD586_RS06805 () | 1521733..1537905 | + | 16173 | WP_012884074.1 | Polyketide synthase PksL | VF |
| DD586_RS06810 () | 1537902..1538891 | + | 990 | WP_012884075.1 | 2-alkyl-3-oxoalkanoate reductase | VF |
| DD586_RS06815 () | 1538943..1540187 | + | 1245 | WP_012884076.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| DD586_RS06820 () | 1540213..1540482 | + | 270 | WP_012884077.1 | acyl carrier protein | - |
| DD586_RS06825 () | 1540554..1542446 | + | 1893 | WP_012884078.1 | Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC | VF |
| DD586_RS06830 () | 1542471..1549364 | + | 6894 | WP_208855564.1 | Linear gramicidin synthase subunit D | VF |
| DD586_RS06835 () | 1549468..1552959 | + | 3492 | WP_012884080.1 | Linear gramicidin synthase subunit B | VF |
| DD586_RS06840 () | 1552956..1558748 | + | 5793 | WP_012884081.1 | Dimodular nonribosomal peptide synthase | VF |
| DD586_RS06845 () | 1558877..1560163 | + | 1287 | WP_095522534.1 | cytochrome P450 | - |
| DD586_RS06850 () | 1560224..1561489 | + | 1266 | WP_012884083.1 | glycosyltransferase | - |
| DD586_RS21270 () | 1561563..1562282 | + | 720 | WP_012884084.1 | MBL fold metallo-hydrolase | - |
| DD586_RS06860 () | 1562461..1563003 | + | 543 | WP_012884085.1 | MaoC family dehydratase | - |
| DD586_RS06865 () | 1563104..1564519 | + | 1416 | WP_012884086.1 | MATE family efflux transporter | - |
| DD586_RS06870 () | 1564804..1565655 | + | 852 | WP_157668886.1 | hypothetical protein | - |
| DD586_RS06875 () | 1566500..1567216 | + | 717 | WP_012884089.1 | hypothetical protein | - |
| DD586_RS06880 () | 1567304..1571029 | + | 3726 | WP_012884090.1 | hypothetical protein | - |
| DD586_RS06885 () | 1571022..1582754 | + | 11733 | WP_012884091.1 | LysM peptidoglycan-binding domain-containing protein | - |
| DD586_RS06890 () | 1583141..1583724 | + | 584 | Protein_1362 | FCD domain-containing protein | - |
| DD586_RS06895 () | 1583796..1585001 | - | 1206 | WP_012884093.1 | dienelactone hydrolase family protein | - |
| DD586_RS06900 () | 1585421..1586323 | - | 903 | WP_012884094.1 | LysR family transcriptional regulator | - |
| DD586_RS06905 () | 1586415..1587431 | + | 1017 | WP_012884095.1 | NADP-dependent oxidoreductase | - |
| DD586_RS06910 () | 1587493..1587798 | + | 306 | WP_012884096.1 | antibiotic biosynthesis monooxygenase | - |
| DD586_RS06915 () | 1588107..1588499 | - | 393 | WP_012884097.1 | VOC family protein | - |
| DD586_RS06920 () | 1588692..1589618 | - | 927 | WP_012884098.1 | alpha/beta hydrolase | - |
| DD586_RS06925 () | 1589709..1590284 | + | 576 | WP_012884099.1 | ABATE domain-containing protein | - |
| DD586_RS06935 () | 1590713..1591279 | + | 567 | WP_012884100.1 | TetR/AcrR family transcriptional regulator | - |
| DD586_RS06940 () | 1591344..1591820 | + | 477 | WP_012884101.1 | DUF1348 family protein | - |
| DD586_RS06945 () | 1592013..1592750 | - | 738 | WP_012884102.1 | type 1 glutamine amidotransferase | - |
| DD586_RS06950 () | 1592866..1593633 | + | 768 | WP_012884103.1 | HTH-type transcriptional regulator NimR | VF |
| DD586_RS06955 () | 1593737..1594084 | - | 348 | WP_012884104.1 | HNH nuclease YajD | - |
| DD586_RS06960 () | 1594287..1595243 | - | 957 | WP_012884105.1 | nitronate monooxygenase | - |
| DD586_RS06965 () | 1595346..1596215 | + | 870 | WP_012884106.1 | LysR family transcriptional regulator | - |
| DD586_RS06970 () | 1596427..1597050 | - | 624 | WP_012884107.1 | thiol:disulfide interchange protein DsbA | - |
| DD586_RS06975 () | 1597364..1598773 | - | 1410 | WP_012884108.1 | MATE family efflux transporter | - |
| DD586_RS06980 () | 1598806..1600290 | - | 1485 | WP_012884109.1 | Solvent efflux pump outer membrane protein SrpC | VF |
| DD586_RS06985 () | 1600416..1601033 | + | 618 | WP_012884110.1 | Nucleoid occlusion factor SlmA | VF |
| DD586_RS06990 () | 1601127..1602245 | + | 1119 | WP_012884111.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DD586_RS06995 () | 1602242..1605307 | + | 3066 | WP_012884112.1 | efflux RND transporter permease subunit | - |
| DD586_RS07000 () | 1605351..1606157 | + | 807 | WP_012884113.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| DD586_RS07005 () | 1606202..1607488 | + | 1287 | WP_012884114.1 | beta-ketoacyl-ACP synthase II | - |
| DD586_RS07010 () | 1607590..1608396 | + | 807 | WP_012884115.1 | putative oxidoreductase | VF |
| DD586_RS07015 () | 1608863..1609432 | + | 570 | WP_012884116.1 | HTH-type transcriptional regulator AcrR | VF |
| DD586_RS07020 () | 1609953..1610963 | + | 1011 | WP_208855557.1 | zinc-binding dehydrogenase | - |
| DD586_RS07025 () | 1611427..1612518 | + | 1092 | WP_012884119.1 | alkene reductase | - |
| DD586_RS07030 () | 1612597..1613379 | + | 783 | WP_012884120.1 | SDR family oxidoreductase | - |
| DD586_RS07035 () | 1614191..1614355 | - | 165 | WP_080516764.1 | hypothetical protein | - |
| DD586_RS07040 () | 1614421..1615539 | - | 1119 | WP_012884121.1 | NADH:flavin oxidoreductase | - |
| DD586_RS07045 () | 1615643..1616017 | + | 375 | WP_012884122.1 | helix-turn-helix transcriptional regulator | - |
| DD586_RS07050 () | 1616182..1617237 | - | 1056 | WP_208855558.1 | helix-turn-helix domain-containing protein | - |
| DD586_RS07055 () | 1617414..1618220 | + | 807 | WP_012884124.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| DD586_RS07060 () | 1618291..1618746 | + | 456 | WP_012884125.1 | nuclear transport factor 2 family protein | - |
| DD586_RS07065 () | 1618795..1619091 | + | 297 | WP_012884126.1 | hypothetical protein | - |
| DD586_RS21280 () | 1619270..1619398 | + | 129 | Protein_1397 | VapC toxin family PIN domain ribonuclease | - |
| DD586_RS07070 () | 1619452..1620101 | + | 650 | Protein_1398 | AAA family ATPase | - |
| DD586_RS07075 () | 1620199..1621092 | - | 894 | WP_012884127.1 | MBL fold metallo-hydrolase | - |
| DD586_RS07080 () | 1621495..1622283 | - | 789 | WP_012884128.1 | enoyl-CoA hydratase/isomerase family protein | - |
| DD586_RS07085 () | 1622314..1623210 | - | 897 | WP_012884129.1 | alpha/beta hydrolase | - |
| DD586_RS07090 () | 1623355..1623975 | - | 621 | WP_012884130.1 | flavin reductase family protein | - |
| DD586_RS07095 () | 1624203..1624616 | - | 414 | WP_012884132.1 | tautomerase family protein | - |
| DD586_RS07100 () | 1624666..1625076 | - | 411 | WP_012884133.1 | hypothetical protein | - |
| DD586_RS07105 () | 1625158..1626051 | - | 894 | WP_012884134.1 | Monoterpene epsilon-lactone hydrolase | VF |
| DD586_RS07110 () | 1626060..1627043 | - | 984 | WP_012884135.1 | MBL fold metallo-hydrolase | - |
| DD586_RS07115 () | 1627309..1627794 | + | 486 | WP_012884136.1 | ISKra4 family transposase ISOni2 | Transposase |
| DD586_RS07120 () | 1628146..1628760 | - | 615 | WP_012884137.1 | TetR/AcrR family transcriptional regulator | - |
| DD586_RS07125 () | 1628839..1629720 | + | 882 | WP_012884138.1 | NAD(P)H-binding protein | - |
| DD586_RS07130 () | 1630174..1630260 | + | 87 | Protein_1410 | antitoxin | - |
| DD586_RS07135 () | 1630574..1631203 | - | 630 | WP_012884140.1 | LysE family translocator | - |
| DD586_RS07140 () | 1631336..1631815 | + | 480 | WP_041164840.1 | Lrp/AsnC family transcriptional regulator | - |
| DD586_RS07150 () | 1631926..1633070 | + | 1145 | Protein_1413 | IS3 family transposase ISEal1 | Transposase |
| DD586_RS07155 () | 1634057..1636255 | - | 2199 | WP_012884143.1 | DEAD/DEAH box helicase | - |
| DD586_RS07160 () | 1636252..1637571 | - | 1320 | WP_012884144.1 | ATP-binding protein | - |
| DD586_RS07165 () | 1637575..1639884 | - | 2310 | WP_012884145.1 | TerB N-terminal domain-containing protein | - |
| DD586_RS07170 () | 1640485..1641429 | + | 945 | Protein_1417 | DUF1738 domain-containing protein | - |
| DD586_RS07175 () | 1641750..1641986 | + | 237 | WP_012884146.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| DD586_RS07180 () | 1641989..1642303 | + | 315 | WP_012884147.1 | CcdB family protein | Toxin Detail |
| DD586_RS07185 () | 1642300..1642561 | - | 262 | Protein_1420 | mobilization protein mobC | - |
| DD586_RS07190 () | 1642934..1643437 | + | 504 | WP_012884148.1 | SMI1/KNR4 family protein | - |
| DD586_RS07195 () | 1643475..1645013 | + | 1539 | WP_012884149.1 | hypothetical protein | - |
| DD586_RS07200 () | 1645024..1646046 | + | 1023 | WP_012884150.1 | hypothetical protein | - |
| DD586_RS07205 () | 1646239..1646985 | - | 747 | WP_012884151.1 | hypothetical protein | - |
| DD586_RS07210 () | 1646994..1648856 | - | 1863 | WP_012884152.1 | hypothetical protein | VF |
| DD586_RS21965 () | 1649139..1649495 | + | 357 | WP_157668887.1 | hypothetical protein | - |
| DD586_RS07215 () | 1649793..1650095 | - | 303 | WP_012884153.1 | lipoprotein | - |
| DD586_RS07220 () | 1650136..1651152 | - | 1017 | WP_012884154.1 | Type IV secretion system protein VirB11 | VF |
| DD586_RS07225 () | 1651142..1652350 | - | 1209 | WP_012884155.1 | Type IV secretion system protein virB10 | VF |
| DD586_RS07230 () | 1652347..1653237 | - | 891 | WP_012884156.1 | P-type conjugative transfer protein VirB9 | - |
| DD586_RS07235 () | 1653237..1653920 | - | 684 | WP_012884157.1 | Type IV secretion system protein PtlE | VF |
| DD586_RS07240 () | 1654141..1655169 | - | 1029 | WP_012884158.1 | type IV secretion system protein | - |
| DD586_RS21290 () | 1655181..1655405 | - | 225 | WP_012769218.1 | EexN family lipoprotein | - |
| DD586_RS07245 () | 1655416..1656132 | - | 717 | WP_012884159.1 | type IV secretion system protein | - |
| DD586_RS07250 () | 1656157..1658904 | - | 2748 | WP_012884160.1 | Type IV secretion system protein virB4 | VF |
| DD586_RS07255 () | 1658915..1659190 | - | 276 | WP_012884161.1 | TrbC/VirB2 family protein | - |
| DD586_RS07260 () | 1659210..1659857 | - | 648 | WP_012884162.1 | Type IV secretion system protein virB1 | VF |
| DD586_RS07265 () | 1659927..1660163 | - | 237 | WP_012884163.1 | hypothetical protein | - |
| DD586_RS07270 () | 1660688..1661554 | + | 867 | WP_012884164.1 | DUF2971 domain-containing protein | - |
| DD586_RS07275 () | 1661927..1662136 | - | 210 | WP_012884165.1 | TraR/DksA family transcriptional regulator | - |
| DD586_RS07280 () | 1662126..1662710 | - | 585 | WP_012884166.1 | DUF2857 domain-containing protein | - |
| DD586_RS07285 () | 1662727..1662921 | - | 195 | WP_012884167.1 | AlpA family transcriptional regulator | - |
| DD586_RS21970 () | 1663232..1663402 | + | 171 | WP_157668888.1 | hypothetical protein | - |
| DD586_RS07290 () | 1663419..1663676 | - | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| DD586_RS07295 () | 1663790..1664068 | - | 279 | WP_012884168.1 | HTH-type transcriptional regulator Xre | VF |
| DD586_RS07300 () | 1664202..1664471 | + | 270 | WP_012884169.1 | helix-turn-helix domain-containing protein | - |
| DD586_RS07305 () | 1665176..1665694 | + | 519 | WP_012768188.1 | Major exported protein | VF |
| DD586_RS07310 () | 1665806..1667659 | + | 1854 | WP_012884171.1 | Actin cross-linking toxin VgrG1 | VF |
| DD586_RS07315 () | 1667673..1668080 | + | 408 | WP_012884172.1 | DUF1795 domain-containing protein | - |
| DD586_RS07320 () | 1668092..1671997 | + | 3906 | Protein_1450 | PAAR domain-containing protein | - |
| DD586_RS07325 () | 1672372..1672740 | + | 369 | WP_012884174.1 | hypothetical protein | - |
| DD586_RS07330 () | 1672990..1673916 | - | 927 | WP_012884175.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|