MGE detailed information
MGE type: Prophage MGE length: 32545 bp
Accession: NC_012962 Location: 4605705..4638249 Organism: Photorhabdus asymbiotica Replicon: chromosome
Accession: NC_012962 Location: 4605705..4638249 Organism: Photorhabdus asymbiotica Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAU_RS19565 () | 4601866..4602774 | + | 909 | WP_015836023.1 | Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB | - |
| PAU_RS19570 () | 4602771..4603769 | + | 999 | WP_015836024.1 | iron-dicitrate ABC transporter permease FecC | - |
| PAU_RS19575 () | 4603766..4604722 | + | 957 | WP_015836025.1 | Fe(3+) dicitrate ABC transporter permease subunit FecD | - |
| PAU_RS19580 () | 4604723..4605490 | + | 768 | WP_015836026.1 | Fe(3+) dicitrate ABC transporter ATP-binding protein FecE | - |
| PAU_RS19585 () | 4605705..4605977 | - | 273 | WP_041382498.1 | hypothetical protein | - |
| PAU_RS19590 () | 4606192..4607445 | - | 1254 | WP_015836027.1 | site-specific DNA-methyltransferase | - |
| PAU_RS19595 () | 4607550..4607816 | + | 267 | WP_015836028.1 | helix-turn-helix domain-containing protein | - |
| PAU_RS19600 () | 4607806..4608693 | + | 888 | WP_041382500.1 | hypothetical protein | - |
| PAU_RS19605 () | 4609327..4610259 | - | 933 | WP_121302549.1 | IS3 family transposase IS150 | Transposase |
| PAU_RS19610 () | 4610169..4610675 | - | 507 | WP_012776365.1 | IS3 family transposase ISPlsp1 | Transposase |
| PAU_RS19615 () | 4610720..4610878 | - | 159 | WP_015836030.1 | Arm DNA-binding domain-containing protein | - |
| PAU_RS19620 () | 4611196..4612146 | - | 951 | WP_015836031.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| PAU_RS19625 () | 4612139..4612534 | - | 396 | WP_015836032.1 | hypothetical protein | Antitoxin Detail |
| PAU_RS19630 () | 4612609..4613443 | - | 835 | Protein_3879 | DUF4942 domain-containing protein | - |
| PAU_RS19635 () | 4613557..4613870 | - | 314 | Protein_3880 | toxin | - |
| PAU_RS19640 () | 4613911..4614234 | - | 324 | WP_015836035.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| PAU_RS19645 () | 4614247..4614717 | - | 471 | WP_015836036.1 | DNA repair protein RadC | - |
| PAU_RS19650 () | 4614783..4615604 | - | 822 | WP_015836037.1 | DUF945 domain-containing protein | - |
| PAU_RS19655 () | 4615724..4616135 | - | 412 | Protein_3884 | hypothetical protein | - |
| PAU_RS19660 () | 4616304..4616936 | - | 633 | WP_015836040.1 | hypothetical protein | - |
| PAU_RS19665 () | 4616942..4617643 | - | 702 | WP_015836041.1 | WYL domain-containing protein | - |
| PAU_RS19670 () | 4617856..4618608 | - | 753 | WP_015836042.1 | GTPase family protein | - |
| PAU_RS19675 () | 4618628..4619065 | - | 438 | Protein_3888 | hypothetical protein | - |
| PAU_RS19680 () | 4619713..4619919 | + | 207 | WP_015836044.1 | AlpA family phage regulatory protein | - |
| PAU_RS19685 () | 4620014..4620610 | + | 597 | WP_015836045.1 | hypothetical protein | - |
| PAU_RS19690 () | 4620822..4621399 | + | 578 | Protein_3891 | inovirus-type Gp2 protein | - |
| PAU_RS25150 () | 4621438..4621614 | + | 177 | WP_158307083.1 | hypothetical protein | - |
| PAU_RS19695 () | 4621660..4623192 | + | 1533 | Protein_3893 | type I restriction-modification system subunit M | - |
| PAU_RS25280 () | 4623214..4623822 | + | 609 | Protein_3894 | restriction endonuclease subunit S | - |
| PAU_RS19700 () | 4623827..4625026 | + | 1200 | WP_015836048.1 | AAA family ATPase | - |
| PAU_RS19705 () | 4625019..4628138 | + | 3120 | WP_015836049.1 | type I restriction endonuclease subunit R | - |
| PAU_RS23485 () | 4628511..4629425 | - | 915 | Protein_3897 | HrgA protein | - |
| PAU_RS19715 () | 4629653..4630909 | - | 1257 | Protein_3898 | Prophage integrase IntA ; Integrase | Integrase |
| PAU_RS24870 () | 4632267..4632461 | + | 195 | WP_132346831.1 | hypothetical protein | - |
| PAU_RS19720 () | 4632477..4633355 | + | 879 | WP_015836055.1 | hypothetical protein ; Integrase | Integrase |
| PAU_RS19725 () | 4633359..4633559 | + | 201 | WP_012777182.1 | AlpA family transcriptional regulator | - |
| PAU_RS19730 () | 4633556..4634179 | + | 624 | WP_015836056.1 | ash family protein | - |
| PAU_RS22450 () | 4634160..4636190 | + | 2031 | WP_049795227.1 | AAA family ATPase | - |
| PAU_RS19740 () | 4636650..4636859 | + | 210 | WP_015836058.1 | helix-turn-helix domain-containing protein | - |
| PAU_RS19745 () | 4636987..4638249 | - | 1263 | WP_015836059.1 | Prophage integrase IntA ; Integrase | Integrase |
| PAU_RS19755 () | 4639000..4640217 | + | 1218 | WP_015836060.1 | D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH | - |
| PAU_RS19760 () | 4640325..4641401 | - | 1077 | WP_015836061.1 | LPS export ABC transporter permease LptG | - |
| PAU_RS19765 () | 4641401..4642501 | - | 1101 | WP_015836062.1 | LPS export ABC transporter permease LptF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|