MGE detailed information
MGE type: Prophage MGE length: 51760 bp
Accession: NC_012947 Location: 3890561..3942320 Organism: Escherichia coli BL21-Gold(DE3)pLysS AG Replicon: chromosome
Accession: NC_012947 Location: 3890561..3942320 Organism: Escherichia coli BL21-Gold(DE3)pLysS AG Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECBD_RS19400 () | 3888165..3888890 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| ECBD_RS19405 () | 3888927..3889466 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| ECBD_RS19410 () | 3889531..3890079 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| ECBD_RS19420 () | 3890561..3891157 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| ECBD_RS24375 () | 3891635..3891769 | - | 135 | Protein_3703 | integrase | - |
| ECBD_RS19425 () | 3891825..3892522 | + | 698 | Protein_3704 | IS1 family transposase IS1A | Transposase |
| ECBD_RS19430 () | 3892531..3893013 | - | 483 | Protein_3705 | hypothetical protein | VF |
| ECBD_RS19445 () | 3894469..3895185 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECBD_RS19450 () | 3895205..3896311 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ECBD_RS19455 () | 3896376..3897356 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECBD_RS19460 () | 3897939..3899179 | - | 1241 | Protein_3709 | helicase YjhR | - |
| ECBD_RS25735 () | 3899295..3899540 | + | 246 | Protein_3710 | GNAT family N-acetyltransferase | - |
| ECBD_RS19475 () | 3899917..3900174 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ECBD_RS19480 () | 3900186..3900731 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ECBD_RS19485 () | 3900787..3901533 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ECBD_RS25255 () | 3901702..3901920 | + | 219 | Protein_3714 | hypothetical protein | - |
| ECBD_RS25940 () | 3901958..3902074 | + | 117 | Protein_3715 | VOC family protein | - |
| ECBD_RS19490 () | 3902319..3903440 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ECBD_RS19495 () | 3903437..3903715 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECBD_RS19500 () | 3903727..3905040 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECBD_RS19505 () | 3905053..3905859 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ECBD_RS19510 () | 3905990..3906421 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| ECBD_RS19515 () | 3906433..3907065 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| ECBD_RS19520 () | 3907082..3907864 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ECBD_RS19525 () | 3908054..3908751 | + | 698 | Protein_3723 | IS1 family transposase IS1A | Transposase |
| ECBD_RS19530 () | 3908834..3909091 | - | 258 | WP_000555341.1 | hypothetical protein | - |
| ECBD_RS24405 () | 3909430..3909534 | - | 105 | Protein_3725 | IS3 family transposase | - |
| ECBD_RS25740 () | 3909767..3909832 | + | 66 | Protein_3726 | omptin family outer membrane protease | - |
| ECBD_RS25260 () | 3909852..3910549 | - | 698 | Protein_3727 | IS1 family transposase | - |
| ECBD_RS19555 () | 3910841..3911362 | + | 522 | WP_001283626.1 | hypothetical protein | VF |
| ECBD_RS19560 () | 3911359..3912312 | + | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| ECBD_RS19565 () | 3912399..3914723 | + | 2325 | WP_000188262.1 | Fe(3+) dicitrate transport protein FecA | - |
| ECBD_RS19570 () | 3914768..3915670 | + | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| ECBD_RS19575 () | 3915667..3916665 | + | 999 | WP_000125187.1 | hypothetical protein | VF |
| ECBD_RS19580 () | 3916662..3917618 | + | 957 | WP_000684856.1 | hypothetical protein | VF |
| ECBD_RS19585 () | 3917619..3918386 | + | 768 | WP_000175457.1 | hypothetical protein | VF |
| ECBD_RS25745 () | 3918943..3919200 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| ECBD_RS19595 () | 3919283..3920067 | - | 785 | Protein_3736 | IS3 family transposase ISEc52 | Transposase |
| ECBD_RS19605 () | 3920134..3921290 | + | 1157 | WP_085947616.1 | IS3 family transposase ISSd1 | Transposase |
| ECBD_RS19610 () | 3921444..3923441 | + | 1998 | WP_001293436.1 | choline BCCT transporter BetT | - |
| ECBD_RS24435 () | 3923504..3923917 | + | 414 | WP_000625671.1 | DUF2254 domain-containing protein | - |
| ECBD_RS19620 () | 3924766..3924767 | - | 2 | WP_085948656.1 | IS3 family transposase IS911 | Transposase |
| ECBD_RS25750 () | 3925107..3925343 | - | 237 | Protein_3741 | MFS transporter | - |
| ECBD_RS19635 () | 3925333..3925590 | + | 258 | WP_000254999.1 | hypothetical protein | - |
| ECBD_RS25270 () | 3925643..3925768 | - | 126 | WP_000594405.1 | hypothetical protein | - |
| ECBD_RS19640 () | 3925811..3926929 | - | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| ECBD_RS19645 () | 3926941..3928158 | - | 1218 | WP_000179691.1 | MFS transporter | - |
| ECBD_RS19650 () | 3928767..3930113 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| ECBD_RS25910 () | 3930141..3930284 | - | 144 | WP_000050905.1 | hypothetical protein | - |
| ECBD_RS24445 () | 3930627..3930856 | - | 230 | Protein_3748 | transposase domain-containing protein | - |
| ECBD_RS22830 () | 3931443..3932623 | + | 1181 | Protein_3749 | phosphoethanolamine transferase | - |
| ECBD_RS19680 () | 3932940..3934205 | - | 1266 | Protein_3750 | hypothetical protein ; Integrase | Integrase |
| ECBD_RS19690 () | 3934671..3935690 | + | 1020 | WP_001318460.1 | NADPH-dependent aldehyde reductase Ahr | - |
| ECBD_RS19695 () | 3935694..3936257 | - | 564 | WP_000896738.1 | gluconokinase | - |
| ECBD_RS19700 () | 3936474..3937505 | + | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| ECBD_RS19705 () | 3937529..3938293 | + | 765 | WP_000998695.1 | hypothetical protein | VF |
| ECBD_RS19710 () | 3938356..3939675 | + | 1320 | WP_001128347.1 | gnt-II system L-idonate transporter | - |
| ECBD_RS19715 () | 3939742..3940740 | + | 999 | WP_001309159.1 | DNA-binding transcriptional regulator IdnR | - |
| ECBD_RS19720 () | 3940818..3942320 | + | 1503 | WP_001294573.1 | DUF853 domain-containing protein | - |
| ECBD_RS19725 () | 3942481..3943563 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| ECBD_RS19730 () | 3943563..3944663 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| ECBD_RS19735 () | 3944930..3946441 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| ECBD_RS19740 () | 3946795..3947238 | + | 444 | WP_000786393.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|