MGE detailed information
MGE type: Genomic_island MGE length: 38409 bp
Accession: NC_012917 Location: 3250738..3289146 Organism: Pectobacterium carotovorum subsp. carotovorum PC1 Replicon: chromosome
Accession: NC_012917 Location: 3250738..3289146 Organism: Pectobacterium carotovorum subsp. carotovorum PC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PC1_RS14245 () | 3247888..3249102 | + | 1215 | WP_015841059.1 | tyrosine-type recombinase/integrase | - |
| PC1_RS22215 () | 3249539..3249722 | + | 184 | Protein_2829 | transposase | - |
| PC1_RS22390 () | 3249852..3250070 | - | 219 | WP_155116480.1 | hypothetical protein | - |
| PC1_RS14250 () | 3250172..3250738 | - | 567 | WP_015841060.1 | hypothetical protein | - |
| PC1_RS14255 () | 3250738..3252405 | - | 1668 | WP_015841061.1 | DUF3696 domain-containing protein | - |
| PC1_RS14260 () | 3252422..3253498 | - | 1077 | WP_071821062.1 | restriction endonuclease subunit S | - |
| PC1_RS14265 () | 3253591..3255225 | - | 1635 | WP_015841063.1 | type I restriction-modification system subunit M | - |
| PC1_RS14270 () | 3255289..3258702 | - | 3414 | WP_015841064.1 | DEAD/DEAH box helicase family protein | - |
| PC1_RS14275 () | 3258851..3259057 | - | 207 | WP_015841065.1 | AlpA family transcriptional regulator | - |
| PC1_RS14280 () | 3259161..3259742 | - | 582 | WP_015841066.1 | inovirus-type Gp2 protein | - |
| PC1_RS21900 () | 3260282..3260428 | - | 147 | WP_080516317.1 | IS3 family transposase | - |
| PC1_RS14285 () | 3260706..3261563 | + | 858 | WP_196219327.1 | hypothetical protein | - |
| PC1_RS14290 () | 3261666..3262541 | + | 876 | WP_015841068.1 | GTPase family protein | - |
| PC1_RS14295 () | 3262626..3263447 | + | 822 | WP_015841069.1 | DUF945 domain-containing protein | - |
| PC1_RS14300 () | 3263672..3264370 | + | 699 | WP_015841070.1 | DeoR family transcriptional regulator | - |
| PC1_RS14305 () | 3264552..3265121 | + | 570 | WP_015841071.1 | hypothetical protein | - |
| PC1_RS14310 () | 3265157..3265630 | + | 474 | WP_015841072.1 | hypothetical protein | - |
| PC1_RS14315 () | 3265647..3265880 | + | 234 | WP_014916378.1 | membrane protein | - |
| PC1_RS14320 () | 3265965..3266438 | + | 474 | WP_015841073.1 | DNA repair protein RadC | - |
| PC1_RS14325 () | 3266478..3266813 | + | 336 | WP_015841074.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PC1_RS14330 () | 3266883..3267203 | + | 321 | WP_015841075.1 | TA system toxin CbtA family protein | Toxin Detail |
| PC1_RS14335 () | 3267319..3268152 | + | 834 | WP_015841076.1 | DUF4942 domain-containing protein | - |
| PC1_RS22395 () | 3268334..3268504 | + | 171 | WP_155116481.1 | hypothetical protein | - |
| PC1_RS14340 () | 3268756..3269867 | + | 1112 | Protein_2851 | tyrosine-type recombinase/integrase | - |
| PC1_RS22400 () | 3269884..3270601 | - | 718 | Protein_2852 | IS3 family transposase | - |
| PC1_RS22405 () | 3270602..3270801 | - | 200 | Protein_2853 | IS630 family transposase ISPeat1 | Transposase |
| PC1_RS21520 () | 3270940..3271836 | - | 897 | WP_015841077.1 | HPr kinase | - |
| PC1_RS14360 () | 3271840..3272769 | - | 930 | WP_015841078.1 | hypothetical protein | - |
| PC1_RS14365 () | 3272756..3273907 | - | 1152 | WP_015841079.1 | DegT/DnrJ/EryC1/StrS aminotransferase family protein | - |
| PC1_RS14370 () | 3273900..3275078 | - | 1179 | WP_015841080.1 | hypothetical protein | - |
| PC1_RS14375 () | 3275075..3275536 | - | 462 | WP_015841081.1 | NUDIX domain-containing protein | - |
| PC1_RS14380 () | 3275533..3276789 | - | 1257 | WP_015841082.1 | SPASM domain-containing protein | - |
| PC1_RS14385 () | 3276793..3278097 | - | 1305 | WP_015841083.1 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase | VF |
| PC1_RS14390 () | 3278104..3278706 | - | 603 | WP_015841084.1 | hypothetical protein | - |
| PC1_RS14400 () | 3278967..3279785 | - | 819 | WP_015841086.1 | nucleotidyltransferase domain-containing protein | - |
| PC1_RS14405 () | 3279836..3280063 | - | 228 | WP_015841087.1 | hypothetical protein | - |
| PC1_RS14410 () | 3280889..3282322 | - | 1434 | WP_015841088.1 | FAD-binding protein | - |
| PC1_RS14415 () | 3282319..3283197 | - | 879 | WP_015841089.1 | hypothetical protein | VF |
| PC1_RS14420 () | 3283432..3283653 | - | 222 | WP_010300175.1 | acyl carrier protein | - |
| PC1_RS14425 () | 3283670..3285103 | - | 1434 | WP_015841090.1 | D-alanine--D-alanyl carrier protein ligase | VF |
| PC1_RS14430 () | 3285100..3286218 | - | 1119 | WP_015841091.1 | hypothetical protein | VF |
| PC1_RS14435 () | 3286348..3287484 | - | 1137 | WP_015841092.1 | hypothetical protein | - |
| PC1_RS14440 () | 3288760..3289032 | - | 273 | WP_155116514.1 | hypothetical protein | - |
| PC1_RS14445 () | 3289191..3290084 | - | 894 | WP_015841095.1 | LysR family transcriptional regulator | - |
| PC1_RS14450 () | 3290382..3290831 | + | 450 | WP_196219352.1 | cupin domain-containing protein | - |
| PC1_RS14455 () | 3290947..3291270 | - | 324 | WP_015841097.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| PC1_RS14460 () | 3291769..3292785 | + | 1017 | WP_015841098.1 | iron ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|