MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 53825 bp
Accession: NC_012912 Location: 1679148..1732972 Organism: Dickeya zeae Ech1591 Replicon: chromosome
Accession: NC_012912 Location: 1679148..1732972 Organism: Dickeya zeae Ech1591 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD1591_RS07320 () | 1675457..1676608 | - | 1152 | WP_012769198.1 | MBL fold metallo-hydrolase | - |
| DD1591_RS07325 () | 1676724..1677704 | - | 981 | WP_012769199.1 | aldo/keto reductase | - |
| DD1591_RS07330 () | 1678290..1679000 | - | 711 | Protein_1435 | integrase family protein | - |
| DD1591_RS07340 () | 1679285..1679617 | - | 333 | WP_202959008.1 | DNA mismatch endonuclease Vsr | - |
| DD1591_RS07345 () | 1679797..1685643 | - | 5847 | WP_012769201.1 | DEAD/DEAH box helicase | - |
| DD1591_RS07350 () | 1685663..1687750 | - | 2088 | WP_012769202.1 | hypothetical protein | - |
| DD1591_RS07355 () | 1687763..1690324 | - | 2562 | WP_012769203.1 | hypothetical protein | - |
| DD1591_RS07360 () | 1690321..1691556 | - | 1236 | WP_012769204.1 | DNA cytosine methyltransferase | - |
| DD1591_RS07365 () | 1691841..1692863 | + | 1023 | WP_012769205.1 | DUF4917 family protein | - |
| DD1591_RS07370 () | 1693607..1694551 | + | 945 | WP_012769206.1 | DUF1738 domain-containing protein | - |
| DD1591_RS07375 () | 1694872..1695108 | + | 237 | WP_012769207.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| DD1591_RS07380 () | 1695111..1695425 | + | 315 | WP_012769208.1 | CcdB family protein | Toxin Detail |
| DD1591_RS07385 () | 1695443..1696174 | - | 732 | WP_012769209.1 | hypothetical protein | - |
| DD1591_RS07390 () | 1696183..1697919 | - | 1737 | WP_038927200.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DD1591_RS07395 () | 1698683..1698985 | - | 303 | WP_012769211.1 | lipoprotein | - |
| DD1591_RS07400 () | 1699026..1700042 | - | 1017 | WP_012769212.1 | Type IV secretion system protein VirB11 | VF |
| DD1591_RS07405 () | 1700032..1701234 | - | 1203 | WP_012769213.1 | hypothetical protein | VF |
| DD1591_RS07410 () | 1701231..1702121 | - | 891 | WP_012769214.1 | P-type conjugative transfer protein VirB9 | - |
| DD1591_RS07415 () | 1702121..1702804 | - | 684 | WP_012769215.1 | Type IV secretion system protein PtlE | VF |
| DD1591_RS21950 () | 1702797..1702937 | - | 141 | WP_012769216.1 | hypothetical protein | - |
| DD1591_RS07420 () | 1703025..1704053 | - | 1029 | WP_012769217.1 | type IV secretion system protein | - |
| DD1591_RS21435 () | 1704065..1704289 | - | 225 | WP_012769218.1 | EexN family lipoprotein | - |
| DD1591_RS07425 () | 1704300..1705016 | - | 717 | WP_012769219.1 | type IV secretion system protein | - |
| DD1591_RS07430 () | 1705041..1707788 | - | 2748 | WP_012769220.1 | Type IV secretion system protein virB4 | VF |
| DD1591_RS07435 () | 1707798..1708073 | - | 276 | WP_012769221.1 | hypothetical protein | VF |
| DD1591_RS07440 () | 1708093..1708740 | - | 648 | WP_012769222.1 | hypothetical protein | VF |
| DD1591_RS07445 () | 1708810..1709043 | - | 234 | WP_012769223.1 | hypothetical protein | - |
| DD1591_RS07450 () | 1709669..1710400 | + | 732 | WP_038927201.1 | hypothetical protein | - |
| DD1591_RS07455 () | 1710394..1712670 | + | 2277 | WP_012769225.1 | DEAD/DEAH box helicase | - |
| DD1591_RS07460 () | 1712751..1713959 | + | 1209 | WP_012768020.1 | IS256 family transposase ISEc39 | Transposase |
| DD1591_RS07465 () | 1714453..1714662 | - | 210 | WP_012769226.1 | TraR/DksA family transcriptional regulator | - |
| DD1591_RS07470 () | 1714652..1715236 | - | 585 | WP_012769227.1 | DUF2857 domain-containing protein | - |
| DD1591_RS07475 () | 1715253..1715447 | - | 195 | WP_012769228.1 | AlpA family transcriptional regulator | - |
| DD1591_RS07480 () | 1715942..1716199 | - | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| DD1591_RS07485 () | 1716313..1716591 | - | 279 | WP_012769230.1 | hypothetical protein | VF |
| DD1591_RS07490 () | 1716725..1717012 | + | 288 | WP_012769231.1 | helix-turn-helix domain-containing protein | - |
| DD1591_RS07495 () | 1717345..1717590 | - | 246 | WP_012769232.1 | helix-turn-helix transcriptional regulator | - |
| DD1591_RS07500 () | 1717937..1718455 | + | 519 | WP_012768188.1 | Major exported protein | VF |
| DD1591_RS07505 () | 1718568..1720421 | + | 1854 | WP_012769233.1 | Actin cross-linking toxin VgrG1 | VF |
| DD1591_RS07510 () | 1720435..1720842 | + | 408 | WP_012768190.1 | DUF1795 domain-containing protein | - |
| DD1591_RS07515 () | 1720854..1724813 | + | 3960 | Protein_1473 | PAAR domain-containing protein | - |
| DD1591_RS07520 () | 1725224..1725649 | + | 426 | WP_012769235.1 | immunity 26/phosphotriesterase HocA family protein | - |
| DD1591_RS21440 () | 1725706..1726470 | + | 765 | WP_152487373.1 | hypothetical protein | - |
| DD1591_RS07525 () | 1726467..1726898 | + | 432 | WP_012769236.1 | SMI1/KNR4 family protein | - |
| DD1591_RS07530 () | 1727147..1728073 | - | 927 | WP_012769237.1 | hypothetical protein | - |
| DD1591_RS07540 () | 1729091..1729402 | + | 312 | WP_012769238.1 | DUF736 domain-containing protein | - |
| DD1591_RS21445 () | 1729480..1729629 | - | 150 | Protein_1479 | integrase | - |
| DD1591_RS07550 () | 1729785..1729978 | - | 194 | Protein_1480 | AlpA family transcriptional regulator | - |
| DD1591_RS07555 () | 1730176..1730448 | - | 273 | WP_012769239.1 | helix-turn-helix domain-containing protein | - |
| DD1591_RS07560 () | 1730623..1730910 | + | 288 | WP_033577754.1 | helix-turn-helix domain-containing protein | - |
| DD1591_RS07565 () | 1731096..1731410 | + | 315 | WP_033577753.1 | helix-turn-helix domain-containing protein | - |
| DD1591_RS07570 () | 1731524..1732795 | - | 1272 | WP_012769242.1 | Prophage integrase IntS ; Integrase | Integrase |
| DD1591_RS07580 () | 1733417..1733680 | + | 264 | Protein_1485 | LysR family transcriptional regulator | - |
| DD1591_RS07585 () | 1733788..1735197 | - | 1410 | WP_012769244.1 | D-serine/D-alanine/glycine transporter | - |
| DD1591_RS07595 () | 1735871..1736095 | - | 225 | WP_012769245.1 | DUF2594 family protein | - |
| DD1591_RS07600 () | 1736746..1737408 | + | 663 | WP_012769246.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|