MGE detailed information
MGE type: Prophage MGE length: 73346 bp
Accession: NC_012880 Location: 2464514..2537859 Organism: Dickeya dadantii Ech703 Replicon: chromosome
Accession: NC_012880 Location: 2464514..2537859 Organism: Dickeya dadantii Ech703 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD703_RS10355 () | 2459711..2460217 | - | 507 | WP_023638311.1 | GAF domain-containing protein | - |
| DD703_RS10360 () | 2460472..2461755 | + | 1284 | WP_015853773.1 | membrane integrity lipid transport subunit YebS | - |
| DD703_RS10365 () | 2461724..2464354 | + | 2631 | WP_015853774.1 | PqiB family protein | - |
| DD703_RS10370 () | 2464466..2465911 | + | 1446 | WP_015853775.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DD703_RS10375 () | 2466143..2466343 | + | 201 | WP_015853776.1 | YebW family protein | - |
| DD703_RS10380 () | 2466577..2468583 | - | 2007 | WP_015853777.1 | hypothetical protein | VF |
| DD703_RS10385 () | 2469300..2470163 | - | 864 | WP_015853778.1 | phage repressor protein CI | - |
| DD703_RS10390 () | 2470626..2471135 | + | 510 | WP_015853779.1 | hypothetical protein | - |
| DD703_RS20910 () | 2471206..2471412 | + | 207 | WP_015853780.1 | DUF2732 family protein | - |
| DD703_RS10400 () | 2471412..2471618 | + | 207 | WP_015853781.1 | TraR/DksA C4-type zinc finger protein | - |
| DD703_RS10405 () | 2471848..2473938 | + | 2091 | WP_153247145.1 | replication endonuclease | - |
| DD703_RS10410 () | 2474037..2474258 | + | 222 | WP_015853783.1 | hypothetical protein | - |
| DD703_RS10420 () | 2474799..2475002 | + | 204 | WP_015853784.1 | tail protein X | - |
| DD703_RS10425 () | 2475048..2475515 | + | 468 | WP_015853785.1 | phage tail protein | - |
| DD703_RS10430 () | 2475687..2476328 | + | 642 | WP_015853786.1 | phage baseplate assembly protein V | - |
| DD703_RS10435 () | 2476322..2476672 | + | 351 | WP_194250227.1 | GPW/gp25 family protein | - |
| DD703_RS10440 () | 2476677..2477585 | + | 909 | WP_015853788.1 | baseplate assembly protein | - |
| DD703_RS10445 () | 2477578..2478189 | + | 612 | WP_015853789.1 | phage tail protein I | - |
| DD703_RS10450 () | 2478557..2479912 | + | 1356 | WP_015853790.1 | esterase-like activity of phytase family protein | - |
| DD703_RS10455 () | 2480119..2481462 | + | 1344 | WP_015853791.1 | aromatic acid/H+ symport family MFS transporter | - |
| DD703_RS10460 () | 2481574..2482140 | - | 567 | WP_015853792.1 | DNA endonuclease SmrA | - |
| DD703_RS10465 () | 2482562..2483113 | + | 552 | WP_015853793.1 | phage tail protein | - |
| DD703_RS10470 () | 2483116..2483727 | + | 612 | WP_026595178.1 | tail fiber assembly protein | - |
| DD703_RS10475 () | 2483937..2485106 | + | 1170 | WP_015853795.1 | phage tail sheath protein | - |
| DD703_RS10480 () | 2485121..2485639 | + | 519 | WP_015853796.1 | phage major tail tube protein | - |
| DD703_RS10485 () | 2485703..2485993 | + | 291 | WP_015853797.1 | phage tail assembly protein | - |
| DD703_RS20545 () | 2486026..2486145 | + | 120 | WP_023638314.1 | GpE family phage tail protein | - |
| DD703_RS10490 () | 2486138..2488351 | + | 2214 | WP_015853799.1 | hypothetical protein | - |
| DD703_RS10495 () | 2488365..2488859 | + | 495 | WP_015853800.1 | phage tail protein | - |
| DD703_RS10500 () | 2488856..2490061 | + | 1206 | WP_015853801.1 | late control D family protein | - |
| DD703_RS20550 () | 2490158..2490352 | + | 195 | WP_015853802.1 | ogr/Delta-like zinc finger family protein | - |
| DD703_RS10505 () | 2490854..2492707 | + | 1854 | WP_015853803.1 | diguanylate cyclase | - |
| DD703_RS20555 () | 2492727..2492909 | + | 183 | WP_153247096.1 | hypothetical protein | - |
| DD703_RS10510 () | 2492990..2494660 | + | 1671 | WP_015853804.1 | Methyl-accepting chemotaxis protein I | VF |
| DD703_RS10515 () | 2495000..2495701 | + | 702 | WP_015853805.1 | DJ-1/PfpI family protein | - |
| DD703_RS10525 () | 2496046..2496360 | + | 315 | WP_015853806.1 | phage holin family protein | - |
| DD703_RS10530 () | 2496350..2496841 | + | 492 | WP_015853807.1 | glycoside hydrolase family 104 protein | - |
| DD703_RS10535 () | 2496838..2497287 | + | 450 | WP_015853808.1 | Rz-like lysis system protein LysB | - |
| DD703_RS10540 () | 2497235..2497399 | + | 165 | WP_015853809.1 | Rz1-like lysis system protein LysC | - |
| DD703_RS10545 () | 2497630..2498103 | - | 474 | WP_015853810.1 | OsmC family protein | - |
| DD703_RS10550 () | 2498328..2500214 | + | 1887 | WP_015853811.1 | DUF1800 domain-containing protein | - |
| DD703_RS10555 () | 2500230..2501447 | + | 1218 | WP_015853812.1 | DUF1501 domain-containing protein | - |
| DD703_RS10560 () | 2501475..2503361 | + | 1887 | WP_015853813.1 | chitin synthase | - |
| DD703_RS10565 () | 2503502..2503960 | - | 459 | WP_015853814.1 | hypothetical protein | - |
| DD703_RS20560 () | 2505365..2505592 | - | 228 | WP_015853816.1 | YdcH family protein | - |
| DD703_RS10580 () | 2506022..2506945 | + | 924 | WP_015853817.1 | Lipid A biosynthesis palmitoleoyltransferase | VF |
| DD703_RS20915 () | 2507000..2507200 | - | 201 | WP_155961687.1 | hypothetical protein | - |
| DD703_RS10585 () | 2507523..2507735 | - | 213 | WP_015853818.1 | RNA chaperone/antiterminator CspA | - |
| - () | 2508278..2508371 | + | 94 | - | - | Antitoxin Detail |
| - () | 2508282..2508371 | - | 90 | - | - | Toxin Detail |
| DD703_RS10590 () | 2508562..2508900 | - | 339 | WP_023638320.1 | YebY family protein | - |
| DD703_RS10595 () | 2509110..2509610 | - | 501 | WP_015853820.1 | non-heme ferritin | - |
| DD703_RS10600 () | 2510030..2510908 | - | 879 | WP_015853821.1 | copper homeostasis membrane protein CopD | - |
| DD703_RS10605 () | 2511145..2511375 | + | 231 | WP_015853822.1 | DNA polymerase III subunit theta | - |
| DD703_RS20565 () | 2511381..2511518 | - | 138 | WP_015853823.1 | hypothetical protein | - |
| DD703_RS10610 () | 2512138..2514198 | - | 2061 | WP_015853825.1 | prolyl oligopeptidase family serine peptidase | - |
| DD703_RS10615 () | 2514536..2515714 | + | 1179 | WP_015853826.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DD703_RS10620 () | 2515808..2516284 | - | 477 | WP_015853827.1 | DMT family transporter | - |
| DD703_RS10625 () | 2516286..2516747 | - | 462 | WP_015853828.1 | DMT family transporter | - |
| DD703_RS10630 () | 2516852..2517859 | + | 1008 | WP_015853829.1 | HTH-type transcriptional regulator DmlR | VF |
| DD703_RS10635 () | 2517914..2519155 | - | 1242 | WP_015853830.1 | xylanase | - |
| DD703_RS10640 () | 2519631..2520272 | - | 642 | WP_015853831.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DD703_RS10645 () | 2520440..2521915 | - | 1476 | WP_015853832.1 | glucose-6-phosphate dehydrogenase | - |
| DD703_RS10650 () | 2522280..2523149 | + | 870 | WP_015853833.1 | MurR/RpiR family transcriptional regulator | - |
| DD703_RS10655 () | 2523323..2524765 | + | 1443 | WP_015853834.1 | pyruvate kinase | - |
| DD703_RS10660 () | 2525420..2525632 | - | 213 | Protein_2114 | hypothetical protein | - |
| DD703_RS10665 () | 2526217..2527197 | - | 981 | WP_015853836.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DD703_RS10670 () | 2527347..2528807 | - | 1461 | WP_015853837.1 | Murein DD-endopeptidase MepM | VF |
| DD703_RS10675 () | 2528820..2529842 | - | 1023 | WP_015853838.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DD703_RS10680 () | 2529918..2530676 | + | 759 | WP_015853839.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| DD703_RS10685 () | 2530673..2531458 | + | 786 | WP_015853840.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| DD703_RS10690 () | 2531610..2532614 | - | 1005 | WP_015853841.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DD703_RS10695 () | 2532622..2533236 | - | 615 | WP_015853842.1 | Holliday junction branch migration protein RuvA | - |
| DD703_RS10700 () | 2533512..2534543 | - | 1032 | WP_015853843.1 | HoxN/HupN/NixA family nickel/cobalt transporter | - |
| DD703_RS10710 () | 2534881..2536890 | - | 2010 | WP_015853844.1 | transketolase | - |
| DD703_RS10715 () | 2536909..2537859 | - | 951 | WP_015853845.1 | transaldolase | - |
| DD703_RS10720 () | 2537892..2538350 | - | 459 | WP_015853846.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| DD703_RS10725 () | 2538400..2538771 | - | 372 | WP_015853847.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| DD703_RS10730 () | 2538782..2539789 | - | 1008 | WP_015853848.1 | 2-keto-3-deoxygluconate permease | - |
| DD703_RS10735 () | 2539953..2541671 | - | 1719 | WP_015853849.1 | four-carbon acid sugar kinase family protein | - |
| DD703_RS10740 () | 2541727..2542752 | - | 1026 | WP_015853850.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|