MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 94699 bp
Accession: NC_012560 Location: 3617324..3712022 Organism: Azotobacter vinelandii DJ Replicon: chromosome
Accession: NC_012560 Location: 3617324..3712022 Organism: Azotobacter vinelandii DJ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVIN_RS16110 () | 3613745..3614803 | - | 1059 | WP_012702068.1 | quinolinate synthase NadA | - |
| AVIN_RS16115 () | 3614984..3615241 | - | 258 | WP_012702069.1 | hypothetical protein | - |
| AVIN_RS16120 () | 3615615..3617054 | - | 1440 | WP_072432487.1 | DASS family sodium-coupled anion symporter | - |
| AVIN_RS16125 () | 3617564..3618073 | + | 510 | WP_012702073.1 | DUF3016 domain-containing protein | - |
| AVIN_RS26570 () | 3618397..3618784 | + | 388 | Protein_3224 | hypothetical protein | - |
| AVIN_RS25335 () | 3618966..3619094 | - | 129 | WP_081434900.1 | peptide-methionine (S)-S-oxide reductase | - |
| AVIN_RS26575 () | 3619879..3620043 | + | 165 | WP_156483618.1 | hypothetical protein | - |
| AVIN_RS16135 () | 3620301..3621350 | + | 1050 | WP_012702076.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| AVIN_RS16140 () | 3621365..3622235 | + | 871 | Protein_3228 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| AVIN_RS16145 () | 3622353..3623246 | + | 894 | WP_012702078.1 | HTH-type transcriptional regulator PgrR | VF |
| AVIN_RS16150 () | 3623606..3624736 | + | 1131 | WP_012702079.1 | MFS transporter | - |
| AVIN_RS16155 () | 3624835..3625740 | + | 906 | WP_012702080.1 | HTH-type transcriptional regulator PgrR | VF |
| AVIN_RS16160 () | 3625795..3626803 | - | 1009 | Protein_3232 | radical SAM protein | - |
| AVIN_RS16165 () | 3626793..3627773 | - | 981 | WP_012702082.1 | XdhC family protein | - |
| AVIN_RS16170 () | 3628485..3628931 | + | 447 | WP_012702083.1 | (2Fe-2S)-binding protein | - |
| AVIN_RS16175 () | 3628936..3631176 | + | 2241 | WP_012702084.1 | xanthine dehydrogenase family protein molybdopterin-binding subunit | - |
| AVIN_RS16180 () | 3631229..3631699 | + | 471 | Protein_3236 | cupin domain-containing protein | - |
| AVIN_RS16185 () | 3631903..3632400 | - | 498 | WP_012702087.1 | hypothetical protein | - |
| AVIN_RS16190 () | 3632844..3633860 | - | 1017 | WP_012700000.1 | IS110 family transposase ISAzvi2 | Transposase |
| AVIN_RS16195 () | 3633976..3634293 | + | 318 | WP_012702088.1 | IS630 family transposase ISMex41 | Transposase |
| AVIN_RS16200 () | 3634554..3634799 | - | 246 | WP_012702089.1 | DUF2274 domain-containing protein | - |
| AVIN_RS16205 () | 3634796..3636075 | - | 1280 | Protein_3241 | hypothetical protein | VF |
| AVIN_RS16210 () | 3636078..3637079 | - | 1002 | WP_175556047.1 | P-type conjugative transfer protein TrbG | - |
| AVIN_RS16215 () | 3637076..3637780 | - | 705 | WP_012702091.1 | conjugal transfer protein TrbF | - |
| AVIN_RS16220 () | 3637811..3639184 | - | 1374 | WP_012702092.1 | P-type conjugative transfer protein TrbL | - |
| AVIN_RS16225 () | 3639181..3639483 | - | 303 | WP_012702093.1 | hypothetical protein | - |
| AVIN_RS16230 () | 3639496..3640233 | - | 738 | WP_012702094.1 | P-type conjugative transfer protein TrbJ | - |
| AVIN_RS16235 () | 3640230..3642680 | - | 2451 | WP_012702095.1 | conjugal transfer protein TrbE | - |
| AVIN_RS16240 () | 3642693..3642977 | - | 285 | WP_012702096.1 | VirB3 family type IV secretion system protein | - |
| AVIN_RS16245 () | 3642974..3643357 | - | 384 | WP_041807327.1 | TrbC/VirB2 family protein | - |
| AVIN_RS16250 () | 3643354..3644406 | - | 1053 | WP_012702098.1 | hypothetical protein | VF |
| AVIN_RS16255 () | 3644403..3644867 | - | 465 | WP_012702099.1 | CopG family transcriptional regulator | - |
| AVIN_RS16260 () | 3644864..3646864 | - | 2001 | WP_012702100.1 | Conjugal transfer protein TraG | VF |
| AVIN_RS16265 () | 3647100..3647366 | - | 267 | WP_012702101.1 | EexN family lipoprotein | - |
| AVIN_RS16270 () | 3647363..3648307 | - | 945 | WP_012702102.1 | HTH-type transcriptional regulator HdfR | VF |
| AVIN_RS16275 () | 3648318..3649796 | - | 1479 | WP_012702103.1 | MFS transporter | - |
| AVIN_RS16280 () | 3649892..3650509 | + | 618 | WP_012702104.1 | TetR/AcrR family transcriptional regulator | - |
| AVIN_RS16285 () | 3650610..3651641 | - | 1032 | WP_012702105.1 | hypothetical protein | - |
| AVIN_RS16290 () | 3651699..3652562 | - | 864 | WP_012702106.1 | nuclear transport factor 2 family protein | - |
| AVIN_RS16295 () | 3652713..3653264 | + | 552 | WP_012702107.1 | TetR/AcrR family transcriptional regulator | - |
| AVIN_RS16300 () | 3653311..3654111 | - | 801 | WP_012702108.1 | NAD(P)H-dependent oxidoreductase | - |
| AVIN_RS16305 () | 3654196..3655092 | + | 897 | WP_012702109.1 | LysR family transcriptional regulator | - |
| AVIN_RS16310 () | 3655160..3655423 | - | 264 | WP_012702110.1 | EexN family lipoprotein | - |
| AVIN_RS16315 () | 3655420..3656364 | - | 945 | WP_012702111.1 | LysR family transcriptional regulator | - |
| AVIN_RS16320 () | 3656368..3657576 | - | 1209 | WP_012702112.1 | MFS transporter | - |
| AVIN_RS16325 () | 3657573..3658820 | - | 1248 | WP_201765936.1 | MFS transporter | - |
| AVIN_RS16330 () | 3658820..3660010 | - | 1191 | WP_012702114.1 | serine hydrolase | - |
| AVIN_RS16335 () | 3660127..3661056 | + | 930 | WP_012702115.1 | HTH-type transcriptional regulator DmlR | VF |
| AVIN_RS16340 () | 3661086..3662264 | - | 1179 | WP_012702116.1 | MFS transporter | - |
| AVIN_RS16345 () | 3662423..3663337 | + | 915 | WP_012702118.1 | HTH-type transcriptional regulator DmlR | VF |
| AVIN_RS16350 () | 3663354..3665339 | - | 1986 | WP_012702119.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| AVIN_RS16355 () | 3665788..3666387 | - | 600 | WP_041807329.1 | S26 family signal peptidase | - |
| AVIN_RS16360 () | 3666384..3666929 | - | 546 | WP_041807331.1 | DUF2840 domain-containing protein | - |
| AVIN_RS16365 () | 3666926..3667180 | - | 255 | WP_012702122.1 | hypothetical protein | - |
| AVIN_RS16370 () | 3667177..3667815 | - | 639 | WP_012702123.1 | Chromosome-partitioning ATPase Soj | VF |
| AVIN_RS16375 () | 3668057..3668914 | - | 858 | WP_187149014.1 | replication initiator protein A | - |
| AVIN_RS16380 () | 3668941..3669225 | - | 285 | WP_041807335.1 | helix-turn-helix domain-containing protein | - |
| AVIN_RS16385 () | 3669337..3670119 | - | 783 | WP_012702126.1 | DUF2285 domain-containing protein | - |
| AVIN_RS16390 () | 3670458..3670805 | - | 348 | WP_041807337.1 | DUF2958 domain-containing protein | - |
| AVIN_RS16395 () | 3671091..3671384 | + | 294 | WP_072432897.1 | helix-turn-helix domain-containing protein | - |
| AVIN_RS16400 () | 3671645..3672151 | - | 507 | WP_012702130.1 | DNA repair protein RadC | - |
| AVIN_RS25350 () | 3672551..3674056 | - | 1506 | WP_012702131.1 | DNA cytosine methyltransferase | - |
| AVIN_RS25355 () | 3674019..3674462 | - | 444 | WP_072432898.1 | DNA mismatch endonuclease Vsr | - |
| AVIN_RS25360 () | 3674474..3675817 | - | 1344 | WP_012702133.1 | hypothetical protein | - |
| AVIN_RS16415 () | 3675814..3677985 | - | 2172 | WP_012702134.1 | hypothetical protein | VF |
| AVIN_RS16420 () | 3677985..3678230 | - | 246 | WP_012702135.1 | hypothetical protein | - |
| AVIN_RS26580 () | 3678257..3678673 | + | 417 | WP_175556031.1 | hypothetical protein | - |
| AVIN_RS16430 () | 3678902..3679222 | - | 321 | WP_012702136.1 | addiction module antidote protein | - |
| AVIN_RS16435 () | 3679219..3679554 | - | 336 | WP_012702137.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVIN_RS16440 () | 3679716..3680918 | - | 1203 | WP_012702138.1 | hypothetical protein ; Integrase | Integrase |
| AVIN_RS25365 () | 3681085..3681702 | + | 618 | WP_081434903.1 | IS630 family transposase ISMex30 | Transposase |
| AVIN_RS16450 () | 3681873..3683078 | - | 1206 | WP_012702140.1 | IS701 family transposase ISAzvi10 | Transposase |
| AVIN_RS16455 () | 3683176..3684594 | - | 1419 | WP_012702141.1 | PLP-dependent aminotransferase family protein | - |
| AVIN_RS16470 () | 3685629..3685835 | + | 207 | Protein_3294 | IS701 family transposase ISAzvi10 | Transposase |
| AVIN_RS16475 () | 3685959..3686369 | - | 411 | WP_012702142.1 | type II toxin-antitoxin system VapC family toxin | - |
| AVIN_RS16480 () | 3686369..3686605 | - | 237 | WP_012702143.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AVIN_RS16485 () | 3686878..3687234 | + | 357 | WP_012702144.1 | RAQPRD family integrative conjugative element protein | - |
| AVIN_RS16490 () | 3687231..3687470 | + | 240 | WP_012702145.1 | TIGR03758 family integrating conjugative element protein | - |
| AVIN_RS16495 () | 3687489..3687833 | + | 345 | WP_012702146.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| AVIN_RS16500 () | 3687846..3688238 | + | 393 | WP_012702147.1 | TIGR03750 family conjugal transfer protein | - |
| AVIN_RS16505 () | 3688235..3688891 | + | 657 | WP_012702148.1 | TIGR03746 family integrating conjugative element protein | - |
| AVIN_RS16510 () | 3688888..3689811 | + | 924 | WP_012702149.1 | TIGR03749 family integrating conjugative element protein | - |
| AVIN_RS16515 () | 3689792..3691279 | + | 1488 | WP_012702150.1 | TIGR03752 family integrating conjugative element protein | - |
| AVIN_RS16520 () | 3691257..3691703 | + | 447 | WP_012702151.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| AVIN_RS16525 () | 3691703..3694624 | + | 2922 | WP_012702152.1 | conjugative transfer ATPase | - |
| AVIN_RS16530 () | 3694668..3694967 | + | 300 | WP_012702153.1 | hypothetical protein | - |
| AVIN_RS16535 () | 3694964..3695689 | + | 726 | WP_012702154.1 | thioredoxin domain-containing protein | - |
| AVIN_RS16540 () | 3696344..3698044 | - | 1701 | WP_012702156.1 | protein kinase | - |
| AVIN_RS16550 () | 3698697..3699062 | + | 366 | WP_012702158.1 | TIGR03757 family integrating conjugative element protein | - |
| AVIN_RS16555 () | 3699059..3699991 | + | 933 | WP_012702159.1 | TIGR03756 family integrating conjugative element protein | - |
| AVIN_RS16560 () | 3700014..3701378 | + | 1365 | WP_012702160.1 | integrating conjugative element protein | - |
| AVIN_RS16565 () | 3701385..3701741 | + | 357 | WP_012702161.1 | hypothetical protein | - |
| AVIN_RS16570 () | 3701738..3703303 | + | 1566 | WP_012702162.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AVIN_RS16575 () | 3703321..3703626 | - | 306 | WP_041807344.1 | hypothetical protein | - |
| AVIN_RS25370 () | 3703679..3703852 | - | 174 | WP_081434905.1 | hypothetical protein | - |
| AVIN_RS16580 () | 3703859..3704182 | - | 324 | WP_012702163.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AVIN_RS16585 () | 3704179..3704388 | - | 210 | WP_041807346.1 | antitoxin MazE family protein | Antitoxin Detail |
| AVIN_RS16590 () | 3704582..3705184 | + | 603 | WP_012702164.1 | DUF4852 domain-containing protein | - |
| AVIN_RS16595 () | 3705297..3705536 | - | 240 | WP_175556057.1 | Arc family DNA-binding protein | - |
| AVIN_RS16600 () | 3705886..3706919 | + | 1034 | Protein_3320 | IS630 family transposase ISAzo32 | Transposase |
| AVIN_RS25380 () | 3707336..3707974 | + | 639 | WP_012702167.1 | hypothetical protein | - |
| AVIN_RS16605 () | 3708196..3708903 | - | 708 | WP_012702168.1 | hypothetical protein | - |
| AVIN_RS16610 () | 3709254..3710261 | - | 1008 | WP_012700287.1 | IS5 family transposase ISAzo41 | Transposase |
| AVIN_RS16615 () | 3710438..3711067 | - | 630 | Protein_3324 | IS3 family transposase ISAzvi9 | Transposase |
| AVIN_RS16620 () | 3711139..3711918 | - | 780 | WP_012699613.1 | IS21 family transposase ISKpn7 | Transposase |
| AVIN_RS16625 () | 3711915..3712940 | - | 1026 | WP_012702170.1 | IS21 family transposase | - |
| AVIN_RS25385 () | 3713024..3713552 | - | 529 | Protein_3327 | transposase | - |
| AVIN_RS16635 () | 3713889..3714191 | - | 303 | WP_041807348.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVIN_RS16640 () | 3714188..3714484 | - | 297 | WP_201765937.1 | antitoxin of toxin-antitoxin stability system | - |
| AVIN_RS16645 () | 3714585..3714878 | - | 294 | WP_012702173.1 | hypothetical protein | - |
| AVIN_RS16650 () | 3715153..3715629 | + | 477 | WP_012702174.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|