MGE detailed information
MGE type: Prophage MGE length: 67240 bp
Accession: NC_012559 Location: 1650379..1717618 Organism: Laribacter hongkongensis HLHK9 Replicon: chromosome
Accession: NC_012559 Location: 1650379..1717618 Organism: Laribacter hongkongensis HLHK9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHK_RS07830 () | 1646715..1647302 | + | 588 | WP_012697194.1 | isochorismatase family protein | - |
| LHK_RS07835 () | 1647289..1648176 | + | 888 | WP_012697195.1 | O-acetylserine/cysteine exporter | - |
| LHK_RS07840 () | 1648173..1649048 | + | 876 | WP_012697196.1 | helix-turn-helix domain-containing protein | - |
| LHK_RS07845 () | 1650379..1650963 | - | 585 | WP_012697197.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LHK_RS16560 () | 1651418..1652017 | - | 600 | WP_143714465.1 | hypothetical protein | - |
| LHK_RS07850 () | 1651992..1652708 | - | 717 | WP_012697198.1 | hypothetical protein | - |
| LHK_RS15330 () | 1652701..1653879 | - | 1179 | WP_052292565.1 | DUF927 domain-containing protein | - |
| LHK_RS15335 () | 1653880..1655667 | - | 1788 | WP_012697200.1 | DUF927 domain-containing protein | - |
| LHK_RS16565 () | 1655664..1655879 | - | 216 | WP_012697201.1 | hypothetical protein | - |
| LHK_RS16570 () | 1655876..1656202 | - | 327 | WP_012697202.1 | hypothetical protein | - |
| LHK_RS15950 () | 1656202..1656384 | - | 183 | WP_012697203.1 | hypothetical protein | - |
| LHK_RS07865 () | 1656870..1657538 | - | 669 | WP_012697204.1 | KilA-N domain-containing protein | - |
| LHK_RS07870 () | 1657535..1657753 | - | 219 | WP_012697205.1 | helix-turn-helix domain-containing protein | - |
| LHK_RS15955 () | 1658120..1658305 | - | 186 | WP_081433689.1 | AlpA family phage regulatory protein | - |
| LHK_RS16575 () | 1658509..1659423 | - | 915 | WP_143714466.1 | hypothetical protein | - |
| LHK_RS07880 () | 1659644..1661002 | - | 1359 | WP_012697208.1 | Prophage integrase IntA ; Integrase | Integrase |
| LHK_RS07890 () | 1661782..1663197 | + | 1416 | WP_012697209.1 | replicative DNA helicase | - |
| LHK_RS07895 () | 1663214..1663534 | + | 321 | WP_012697210.1 | (2Fe-2S) ferredoxin domain-containing protein | - |
| LHK_RS07900 () | 1663539..1664153 | + | 615 | WP_041825598.1 | Monoacylglycerol lipase | VF |
| LHK_RS07905 () | 1664229..1665579 | + | 1351 | Protein_1605 | metalloprotease PmbA | - |
| LHK_RS07910 () | 1665579..1666205 | + | 627 | WP_012697213.1 | DNA-3-methyladenine glycosylase | - |
| LHK_RS07915 () | 1666271..1666780 | + | 510 | WP_012697214.1 | disulfide bond formation protein B | - |
| LHK_RS07920 () | 1666829..1668295 | + | 1467 | WP_012697215.1 | aminoacyl-histidine dipeptidase | - |
| LHK_RS15960 () | 1668775..1669416 | + | 642 | WP_081433611.1 | thermonuclease family protein | - |
| LHK_RS07930 () | 1669525..1669968 | + | 444 | WP_041825600.1 | hypothetical protein | - |
| LHK_RS15965 () | 1670057..1670299 | + | 243 | WP_081433612.1 | hypothetical protein | - |
| LHK_RS07935 () | 1670415..1671116 | + | 702 | WP_143714467.1 | hypothetical protein | - |
| LHK_RS07940 () | 1671244..1672011 | - | 768 | WP_012697219.1 | DNA adenine methylase | - |
| LHK_RS15970 () | 1672013..1672165 | - | 153 | WP_143714468.1 | Com family DNA-binding transcriptional regulator | - |
| LHK_RS07950 () | 1672358..1672696 | - | 339 | WP_143714546.1 | hypothetical protein | - |
| LHK_RS07955 () | 1672798..1673262 | - | 465 | WP_012697222.1 | lysozyme | - |
| LHK_RS07960 () | 1673244..1673453 | - | 210 | WP_012697223.1 | hypothetical protein | - |
| LHK_RS07965 () | 1673453..1673977 | - | 525 | WP_012697224.1 | DUF4376 domain-containing protein | - |
| LHK_RS07970 () | 1673979..1674632 | - | 654 | WP_143714469.1 | hypothetical protein | - |
| LHK_RS07975 () | 1674644..1676164 | - | 1521 | WP_143714470.1 | hypothetical protein | - |
| LHK_RS07980 () | 1676055..1678538 | - | 2484 | WP_012697227.1 | hypothetical protein | - |
| LHK_RS07985 () | 1678520..1678912 | - | 393 | WP_012697228.1 | hypothetical protein | - |
| LHK_RS07990 () | 1678912..1679388 | - | 477 | WP_012697229.1 | DUF1833 family protein | - |
| LHK_RS07995 () | 1679428..1679778 | - | 351 | WP_143714547.1 | hypothetical protein | - |
| LHK_RS08000 () | 1679778..1682558 | - | 2781 | WP_012697231.1 | phage tail tape measure protein | - |
| LHK_RS08005 () | 1682625..1682912 | - | 288 | WP_012697232.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LHK_RS08010 () | 1682899..1683144 | - | 246 | WP_012697233.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LHK_RS08015 () | 1683280..1683585 | - | 306 | WP_052292567.1 | DUF1799 domain-containing protein | - |
| LHK_RS08020 () | 1683591..1683902 | - | 312 | WP_012697235.1 | hypothetical protein | - |
| LHK_RS08025 () | 1683917..1684567 | - | 651 | WP_012697236.1 | phage tail protein | - |
| LHK_RS08030 () | 1684628..1684981 | - | 354 | WP_012697237.1 | DUF3168 domain-containing protein | - |
| LHK_RS08035 () | 1684968..1685513 | - | 546 | WP_012697238.1 | HK97 gp10 family phage protein | - |
| LHK_RS08040 () | 1685510..1685815 | - | 306 | WP_012697239.1 | phage head closure protein | - |
| LHK_RS08045 () | 1685812..1686111 | - | 300 | WP_012697241.1 | head-tail connector protein | - |
| LHK_RS08050 () | 1686123..1686359 | - | 237 | WP_012697240.1 | hypothetical protein | - |
| LHK_RS08055 () | 1686405..1687646 | - | 1242 | WP_012697242.1 | phage major capsid protein | - |
| LHK_RS08060 () | 1687712..1688470 | - | 759 | WP_012697243.1 | ATP-dependent Clp protease proteolytic subunit 1 | VF |
| LHK_RS08065 () | 1688436..1689734 | - | 1299 | WP_012697244.1 | phage portal protein | - |
| LHK_RS08070 () | 1689731..1691389 | - | 1659 | WP_190273237.1 | terminase large subunit | - |
| LHK_RS16580 () | 1691386..1691565 | - | 180 | WP_143714471.1 | hypothetical protein | - |
| LHK_RS08080 () | 1692082..1692282 | - | 201 | WP_012697247.1 | hypothetical protein | - |
| LHK_RS08085 () | 1692279..1692596 | - | 318 | WP_143714548.1 | HNH endonuclease | - |
| LHK_RS08090 () | 1692652..1693161 | - | 510 | WP_012697249.1 | hypothetical protein | - |
| LHK_RS08095 () | 1693392..1695665 | - | 2274 | WP_143714549.1 | hypothetical protein | - |
| LHK_RS08100 () | 1695915..1698749 | - | 2835 | WP_012697251.1 | hypothetical protein | - |
| LHK_RS16585 () | 1698878..1699132 | - | 255 | Protein_1646 | hypothetical protein | - |
| LHK_RS16590 () | 1699148..1699522 | - | 375 | Protein_1647 | hypothetical protein | - |
| LHK_RS08110 () | 1699894..1700178 | - | 285 | WP_012697253.1 | hypothetical protein | - |
| LHK_RS08115 () | 1700175..1700552 | - | 378 | WP_012697254.1 | hypothetical protein | - |
| LHK_RS08120 () | 1700545..1700982 | - | 438 | WP_012697255.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LHK_RS08125 () | 1701072..1701572 | + | 501 | WP_012697256.1 | hypothetical protein | - |
| LHK_RS15345 () | 1701738..1702514 | - | 777 | WP_143714472.1 | hypothetical protein | - |
| LHK_RS15350 () | 1702519..1703463 | - | 945 | WP_012697258.1 | YdaU family protein | - |
| LHK_RS15355 () | 1703470..1703925 | - | 456 | WP_012697259.1 | phage regulatory CII family protein | - |
| LHK_RS15975 () | 1703928..1704194 | - | 267 | WP_081433614.1 | helix-turn-helix domain-containing protein | - |
| LHK_RS15980 () | 1704301..1704957 | + | 657 | WP_041825610.1 | XRE family transcriptional regulator | - |
| LHK_RS08150 () | 1705185..1705502 | + | 318 | WP_041825612.1 | hypothetical protein | - |
| LHK_RS08155 () | 1705499..1706314 | + | 816 | WP_012697261.1 | PD-(D/E)XK nuclease family protein | - |
| LHK_RS16935 () | 1706332..1707267 | + | 936 | WP_012697262.1 | hypothetical protein | - |
| LHK_RS08165 () | 1707279..1707479 | + | 201 | WP_143714473.1 | hypothetical protein | - |
| LHK_RS08170 () | 1707492..1707908 | + | 417 | WP_012697264.1 | hypothetical protein | - |
| LHK_RS08175 () | 1707927..1708799 | + | 873 | WP_012697265.1 | H-NS histone family protein | - |
| LHK_RS08180 () | 1708851..1709192 | + | 342 | WP_012697266.1 | hypothetical protein | - |
| LHK_RS08185 () | 1709189..1709392 | + | 204 | Protein_1664 | hypothetical protein | - |
| LHK_RS08190 () | 1709455..1711287 | + | 1833 | WP_012697268.1 | AAA family ATPase | - |
| LHK_RS08195 () | 1711627..1712643 | - | 1017 | WP_012697269.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LHK_RS08205 () | 1713090..1714163 | - | 1074 | WP_012697271.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| LHK_RS08210 () | 1714211..1714777 | - | 567 | WP_012697272.1 | hypothetical protein | - |
| LHK_RS08215 () | 1714865..1717618 | - | 2754 | WP_012697273.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| LHK_RS08220 () | 1718063..1719469 | + | 1407 | WP_012697275.1 | sodium:proton antiporter | - |
| LHK_RS08225 () | 1719581..1720399 | + | 819 | WP_012697276.1 | zinc-dependent peptidase | - |
| LHK_RS08230 () | 1720362..1721009 | - | 648 | WP_012697277.1 | hypothetical protein | - |
| LHK_RS08235 () | 1721348..1722295 | - | 948 | WP_012697279.1 | D-2-hydroxyacid dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|