MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 136911 bp
Accession: NC_012483 Location: 3658978..3795888 Organism: Acidobacterium capsulatum ATCC 51196 Replicon: chromosome
Accession: NC_012483 Location: 3658978..3795888 Organism: Acidobacterium capsulatum ATCC 51196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACP_RS15000 () | 3654017..3655003 | + | 987 | WP_148215316.1 | mechanosensitive ion channel family protein | - |
| ACP_RS15005 () | 3655070..3656680 | + | 1611 | WP_015898204.1 | NAD(P)H-hydrate dehydratase | - |
| ACP_RS15010 () | 3656677..3657132 | + | 456 | WP_015898205.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| ACP_RS15015 () | 3657318..3658697 | - | 1380 | WP_015898206.1 | signal recognition particle protein | - |
| ACP_RS15025 () | 3659024..3660205 | - | 1182 | WP_015898207.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| ACP_RS17820 () | 3660202..3660477 | - | 276 | WP_083770633.1 | helix-turn-helix domain-containing protein | - |
| ACP_RS15030 () | 3660761..3661771 | + | 1011 | WP_015898208.1 | LysR family transcriptional regulator | - |
| ACP_RS15035 () | 3661966..3662241 | + | 276 | Protein_2964 | hypothetical protein | - |
| ACP_RS15040 () | 3662254..3662517 | + | 264 | WP_015898210.1 | VirB3 family type IV secretion system protein | - |
| ACP_RS15045 () | 3662498..3664867 | + | 2370 | WP_015898211.1 | VirB4 family type IV secretion system protein | - |
| ACP_RS15050 () | 3664885..3665721 | + | 837 | WP_041839632.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| ACP_RS15055 () | 3665724..3666980 | + | 1257 | WP_015898213.1 | TrbI/VirB10 family protein | - |
| ACP_RS15060 () | 3666999..3667772 | + | 774 | WP_015898214.1 | hypothetical protein | - |
| ACP_RS15065 () | 3667785..3668006 | + | 222 | WP_015898215.1 | hypothetical protein | - |
| ACP_RS15070 () | 3668021..3668941 | + | 921 | WP_015898216.1 | hypothetical protein | - |
| ACP_RS15075 () | 3669116..3669901 | + | 786 | WP_015898217.1 | hypothetical protein | - |
| ACP_RS15080 () | 3670018..3670332 | - | 315 | WP_015898218.1 | XRE family transcriptional regulator | - |
| ACP_RS15085 () | 3670375..3670725 | - | 351 | WP_015898219.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ACP_RS15090 () | 3670809..3671777 | + | 969 | WP_015898220.1 | Type IV secretion system protein VirB11 | VF |
| ACP_RS15095 () | 3672310..3672681 | + | 372 | WP_041839633.1 | single-stranded DNA-binding protein | - |
| ACP_RS15100 () | 3672768..3673715 | + | 948 | WP_015898221.1 | RepB family DNA primase | - |
| ACP_RS15105 () | 3673740..3674066 | + | 327 | WP_015898222.1 | hypothetical protein | - |
| ACP_RS18435 () | 3674234..3674599 | + | 366 | WP_015898223.1 | hypothetical protein | - |
| ACP_RS15115 () | 3674604..3676604 | + | 2001 | WP_015898224.1 | type IV secretion system DNA-binding domain-containing protein | - |
| ACP_RS15120 () | 3676616..3679396 | + | 2781 | WP_015898225.1 | relaxase domain-containing protein | - |
| ACP_RS17825 () | 3679544..3679966 | - | 423 | WP_015898226.1 | DNA sulfur modification protein DndE | - |
| ACP_RS15125 () | 3679926..3681893 | - | 1968 | WP_015898227.1 | DNA sulfur modification protein DndD | - |
| ACP_RS15130 () | 3681880..3683418 | - | 1539 | WP_015898228.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| ACP_RS15135 () | 3683415..3684494 | - | 1080 | WP_015898229.1 | DNA sulfur modification protein DndB | - |
| ACP_RS15140 () | 3684560..3685696 | + | 1137 | WP_015898230.1 | cysteine desulfurase DndA | - |
| ACP_RS15145 () | 3685757..3687052 | - | 1296 | WP_041839634.1 | hypothetical protein | - |
| ACP_RS15150 () | 3687049..3689415 | - | 2367 | WP_202944476.1 | DEAD/DEAH box helicase family protein | - |
| ACP_RS15155 () | 3689671..3690504 | + | 834 | WP_041839635.1 | HNH endonuclease | - |
| ACP_RS15160 () | 3690515..3691636 | + | 1122 | WP_015898234.1 | DGQHR domain-containing protein | - |
| ACP_RS15165 () | 3691881..3692450 | - | 570 | WP_015898235.1 | 50S ribosome-binding GTPase | - |
| ACP_RS15170 () | 3693154..3694215 | - | 1062 | WP_015896448.1 | IS110 family transposase ISCARN52 | Transposase |
| ACP_RS15175 () | 3694659..3695630 | + | 972 | WP_015898236.1 | hypothetical protein | - |
| ACP_RS15180 () | 3695630..3696043 | + | 414 | WP_015898237.1 | hypothetical protein | - |
| ACP_RS15185 () | 3696128..3697717 | + | 1590 | WP_015898238.1 | ParB/RepB/Spo0J family partition protein | - |
| ACP_RS15190 () | 3697908..3701123 | - | 3216 | WP_015898239.1 | error-prone DNA polymerase | - |
| ACP_RS15195 () | 3701116..3702642 | - | 1527 | WP_015898240.1 | DNA polymerase Y family protein | - |
| ACP_RS15200 () | 3702639..3703676 | - | 1038 | WP_015898241.1 | recombinase RecA | - |
| ACP_RS15205 () | 3703812..3704450 | + | 639 | WP_015898242.1 | SOS response-associated peptidase | - |
| ACP_RS18400 () | 3704690..3704854 | + | 165 | WP_169305993.1 | hypothetical protein | - |
| ACP_RS15210 () | 3704887..3705648 | + | 762 | WP_041839636.1 | hypothetical protein | - |
| ACP_RS15215 () | 3705765..3706226 | + | 462 | WP_148215318.1 | hypothetical protein | - |
| ACP_RS15220 () | 3706658..3706972 | - | 315 | WP_015898245.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ACP_RS15225 () | 3706969..3707238 | - | 270 | WP_015898246.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| ACP_RS15230 () | 3707468..3707836 | - | 369 | WP_041839637.1 | NIPSNAP family protein | - |
| ACP_RS15235 () | 3708303..3708905 | + | 603 | WP_148215180.1 | hypothetical protein | - |
| ACP_RS15240 () | 3708950..3710005 | + | 1056 | WP_041839638.1 | FRG domain-containing protein | - |
| ACP_RS15250 () | 3710546..3710911 | + | 366 | WP_083770634.1 | PadR family transcriptional regulator | - |
| ACP_RS15255 () | 3710908..3713544 | + | 2637 | WP_015898249.1 | ABC transporter permease | - |
| ACP_RS15260 () | 3713807..3714496 | - | 690 | WP_015898250.1 | adenylate/guanylate cyclase domain-containing protein | - |
| ACP_RS15265 () | 3714532..3715227 | - | 696 | WP_015898251.1 | adenylate/guanylate cyclase domain-containing protein | - |
| ACP_RS15270 () | 3715240..3716148 | - | 909 | WP_015898252.1 | nucleotide-binding protein | - |
| ACP_RS15275 () | 3716539..3717033 | + | 495 | WP_041839641.1 | hypothetical protein | - |
| ACP_RS17835 () | 3717238..3717636 | - | 399 | WP_041840394.1 | DUF2251 domain-containing protein | - |
| ACP_RS17490 () | 3717923..3719827 | - | 1905 | WP_083770636.1 | serine hydrolase | - |
| ACP_RS15290 () | 3720308..3720649 | + | 342 | WP_015898254.1 | PadR family transcriptional regulator | - |
| ACP_RS15295 () | 3720742..3723303 | + | 2562 | WP_169305994.1 | ABC transporter permease | - |
| ACP_RS15300 () | 3724007..3725242 | + | 1236 | WP_015898256.1 | group II intron reverse transcriptase/maturase | - |
| ACP_RS15305 () | 3725534..3725884 | - | 351 | WP_041839643.1 | helix-turn-helix domain-containing protein | - |
| ACP_RS17840 () | 3725964..3726188 | - | 225 | WP_148215181.1 | helix-turn-helix domain-containing protein | - |
| ACP_RS15315 () | 3726330..3726989 | + | 660 | WP_015898258.1 | sigma-70 family RNA polymerase sigma factor | - |
| ACP_RS15320 () | 3727041..3728276 | + | 1236 | WP_041839645.1 | hypothetical protein | - |
| ACP_RS15325 () | 3728363..3731485 | + | 3123 | WP_015898261.1 | TonB-dependent receptor | - |
| ACP_RS15330 () | 3731542..3733941 | + | 2400 | WP_015898262.1 | hypothetical protein | - |
| ACP_RS15335 () | 3734229..3736112 | - | 1884 | WP_015898264.1 | asparagine synthase | - |
| ACP_RS17495 () | 3736125..3736493 | - | 369 | WP_015898265.1 | lasso peptide biosynthesis B2 protein | - |
| ACP_RS15345 () | 3736518..3737579 | - | 1062 | WP_169305995.1 | phosphotransferase | - |
| ACP_RS18405 () | 3737947..3738186 | - | 240 | WP_169305996.1 | PqqD family protein | - |
| ACP_RS18440 () | 3738392..3739951 | - | 1560 | WP_193760148.1 | hypothetical protein | - |
| ACP_RS17500 () | 3740197..3740631 | - | 435 | WP_052294842.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ACP_RS17850 () | 3740535..3741122 | - | 588 | WP_083770641.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ACP_RS15375 () | 3741119..3741691 | - | 573 | WP_202944477.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| ACP_RS15380 () | 3741944..3742165 | - | 222 | WP_041839650.1 | hypothetical protein | - |
| ACP_RS15385 () | 3742326..3742751 | + | 426 | WP_015896440.1 | nuclear transport factor 2 family protein | - |
| ACP_RS15390 () | 3742857..3743537 | - | 681 | WP_015898271.1 | hypothetical protein | - |
| ACP_RS18410 () | 3743530..3743967 | - | 438 | WP_169305997.1 | hypothetical protein | - |
| ACP_RS15400 () | 3744649..3745233 | - | 585 | WP_015898272.1 | DUF416 family protein | - |
| ACP_RS17855 () | 3745820..3746545 | - | 726 | Protein_3038 | RHS repeat-associated core domain-containing protein | - |
| ACP_RS15410 () | 3746756..3747094 | + | 339 | WP_041839653.1 | hypothetical protein | - |
| ACP_RS17510 () | 3747398..3747643 | + | 246 | WP_052294804.1 | IS21 family transposase ISMac3 | Transposase |
| ACP_RS15415 () | 3747680..3748645 | + | 966 | WP_169305977.1 | IS21 family transposase ISMac9 | Transposase |
| ACP_RS15420 () | 3748662..3749411 | + | 750 | WP_202944515.1 | IS21 family transposase IS21 | Transposase |
| ACP_RS15425 () | 3749636..3749941 | + | 306 | Protein_3043 | hypothetical protein | - |
| ACP_RS15430 () | 3749969..3750295 | + | 327 | WP_041839553.1 | hypothetical protein | - |
| ACP_RS18495 () | 3750430..3750930 | - | 501 | WP_202944467.1 | hypothetical protein | - |
| ACP_RS18500 () | 3750939..3751679 | - | 741 | WP_202944466.1 | hypothetical protein | - |
| ACP_RS15440 () | 3752498..3752833 | + | 336 | WP_052294844.1 | hypothetical protein | - |
| ACP_RS15445 () | 3752837..3754831 | + | 1995 | WP_015898275.1 | type IV secretion system DNA-binding domain-containing protein | - |
| ACP_RS15450 () | 3754841..3757594 | + | 2754 | WP_015898276.1 | relaxase domain-containing protein | - |
| ACP_RS15455 () | 3757735..3760005 | + | 2271 | WP_015898277.1 | PIWI domain-containing protein | - |
| ACP_RS15460 () | 3760002..3761207 | + | 1206 | WP_015898278.1 | hypothetical protein | - |
| ACP_RS15470 () | 3761423..3762490 | + | 1068 | WP_169305998.1 | hypothetical protein | - |
| ACP_RS15475 () | 3762524..3763366 | + | 843 | WP_041839657.1 | hypothetical protein | - |
| ACP_RS15480 () | 3763393..3765105 | - | 1713 | WP_041839658.1 | ATP-dependent helicase | - |
| ACP_RS15485 () | 3765102..3766949 | - | 1848 | WP_015898282.1 | AAA family ATPase | - |
| ACP_RS15490 () | 3767128..3767964 | + | 837 | WP_041839659.1 | hypothetical protein | - |
| ACP_RS15495 () | 3768084..3769658 | + | 1575 | WP_202944478.1 | hypothetical protein | - |
| ACP_RS15500 () | 3769695..3771140 | - | 1446 | WP_015898285.1 | hypothetical protein | - |
| ACP_RS15505 () | 3771455..3772204 | - | 750 | WP_202944515.1 | IS21 family transposase IS21 | Transposase |
| ACP_RS15510 () | 3772221..3773186 | - | 966 | WP_169305977.1 | IS21 family transposase ISMac9 | Transposase |
| ACP_RS17515 () | 3773223..3773468 | - | 246 | WP_052294804.1 | IS21 family transposase ISMac3 | Transposase |
| ACP_RS15515 () | 3773555..3774124 | - | 570 | WP_015898286.1 | RepB family DNA primase | - |
| ACP_RS15520 () | 3774225..3774599 | - | 375 | WP_015898287.1 | single-stranded DNA-binding protein | - |
| ACP_RS15525 () | 3775087..3776055 | - | 969 | WP_041839660.1 | Type IV secretion system protein VirB11 | VF |
| ACP_RS15530 () | 3776052..3776837 | - | 786 | WP_041839661.1 | hypothetical protein | - |
| ACP_RS15540 () | 3777012..3777926 | - | 915 | WP_015898290.1 | hypothetical protein | - |
| ACP_RS15545 () | 3777948..3778169 | - | 222 | WP_015898292.1 | hypothetical protein | - |
| ACP_RS15550 () | 3778181..3778966 | - | 786 | WP_015898293.1 | hypothetical protein | - |
| ACP_RS15555 () | 3778981..3780252 | - | 1272 | WP_015898294.1 | conjugal transfer protein TrbI | - |
| ACP_RS15560 () | 3780255..3781088 | - | 834 | WP_015898295.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| ACP_RS15565 () | 3781113..3783479 | - | 2367 | WP_015898296.1 | VirB4 family type IV secretion system protein | - |
| ACP_RS15570 () | 3783460..3783723 | - | 264 | WP_015898297.1 | VirB3 family type IV secretion system protein | - |
| ACP_RS15575 () | 3783736..3784116 | - | 381 | WP_041840401.1 | hypothetical protein | - |
| ACP_RS18170 () | 3784274..3784489 | - | 216 | WP_148215183.1 | hypothetical protein | - |
| ACP_RS17860 () | 3784562..3784831 | + | 270 | WP_083770642.1 | helix-turn-helix domain-containing protein | - |
| ACP_RS15585 () | 3785175..3786212 | - | 1038 | WP_015898298.1 | SAP domain-containing protein | - |
| ACP_RS15590 () | 3786611..3787198 | - | 588 | WP_015898299.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ACP_RS15595 () | 3787203..3787583 | - | 381 | WP_015898300.1 | helix-turn-helix domain-containing protein | - |
| ACP_RS17865 () | 3787943..3788161 | + | 219 | WP_083770643.1 | hypothetical protein | - |
| ACP_RS15600 () | 3788226..3788447 | + | 222 | WP_041839665.1 | hypothetical protein | - |
| ACP_RS15605 () | 3788737..3790299 | - | 1563 | WP_015898301.1 | TIGR04141 family sporadically distributed protein | - |
| ACP_RS15610 () | 3790419..3792386 | - | 1968 | WP_015898302.1 | DUF3732 domain-containing protein | - |
| ACP_RS15615 () | 3792386..3792892 | - | 507 | WP_052294845.1 | hypothetical protein | - |
| ACP_RS15620 () | 3792876..3794075 | - | 1200 | WP_148215184.1 | hypothetical protein | - |
| ACP_RS18180 () | 3794385..3794553 | + | 169 | Protein_3085 | IS3 family transposase | - |
| ACP_RS15625 () | 3794572..3795144 | - | 573 | WP_015898304.1 | PIN domain-containing protein | Toxin Detail |
| ACP_RS15630 () | 3795147..3795596 | - | 450 | WP_015898305.1 | excisionase family DNA-binding protein | Antitoxin Detail |
| ACP_RS15635 () | 3796233..3797123 | - | 891 | WP_015898306.1 | dihydrodipicolinate synthase family protein | - |
| ACP_RS15640 () | 3797136..3798428 | - | 1293 | WP_015898307.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| ACP_RS15645 () | 3798421..3798666 | - | 246 | WP_041839667.1 | (2Fe-2S)-binding protein | - |
| ACP_RS15650 () | 3798659..3799792 | - | 1134 | WP_015898308.1 | FAD-binding oxidoreductase | - |
| ACP_RS15655 () | 3799789..3800736 | - | 948 | WP_015898309.1 | proline racemase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|