MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 81705 bp
Accession: NC_012468 Location: 970520..1052224 Organism: Streptococcus pneumoniae 70585 Replicon: chromosome
Accession: NC_012468 Location: 970520..1052224 Organism: Streptococcus pneumoniae 70585 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SP70585_RS05225 () | 966665..967759 | + | 1095 | WP_000709236.1 | ferrochelatase | - |
| SP70585_RS05230 () | 967801..968178 | - | 378 | WP_000916795.1 | large conductance mechanosensitive channel protein MscL | - |
| SP70585_RS05235 () | 968260..968691 | - | 432 | WP_000742996.1 | GtrA family protein | - |
| SP70585_RS05240 () | 968814..969323 | + | 510 | WP_000737071.1 | QueT transporter family protein | - |
| SP70585_RS05250 () | 969837..970913 | + | 1077 | WP_000542475.1 | aspartate-semialdehyde dehydrogenase | - |
| SP70585_RS05255 () | 970969..971904 | + | 936 | WP_000121629.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| SP70585_RS05260 () | 971951..973324 | - | 1374 | WP_012677133.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| SP70585_RS05265 () | 973461..973643 | - | 183 | WP_001117401.1 | 4-oxalocrotonate tautomerase | - |
| SP70585_RS05270 () | 973766..974365 | + | 600 | WP_000068146.1 | thymidine kinase | - |
| SP70585_RS05275 () | 974355..974834 | + | 480 | WP_000151338.1 | GNAT family N-acetyltransferase | - |
| SP70585_RS05280 () | 974844..975923 | + | 1080 | WP_001028801.1 | peptide chain release factor 1 | - |
| SP70585_RS05285 () | 975923..976762 | + | 840 | WP_000761891.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| SP70585_RS05290 () | 976746..977348 | + | 603 | WP_000969287.1 | threonylcarbamoyl-AMP synthase | - |
| SP70585_RS05295 () | 977350..977781 | + | 432 | WP_000942934.1 | GNAT family N-acetyltransferase | - |
| SP70585_RS05300 () | 977843..979099 | + | 1257 | WP_000575529.1 | serine hydroxymethyltransferase | - |
| SP70585_RS05305 () | 979107..980081 | + | 975 | WP_000356092.1 | nucleoid-associated protein | - |
| SP70585_RS05310 () | 980081..980695 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
| SP70585_RS05315 () | 980769..981743 | + | 975 | WP_001227744.1 | DUF1002 domain-containing protein | - |
| SP70585_RS05320 () | 981817..983178 | + | 1362 | WP_000914585.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| SP70585_RS13165 () | 983390..983563 | + | 174 | WP_001174904.1 | hypothetical protein | - |
| SP70585_RS05325 () | 983560..984369 | + | 810 | WP_000822781.1 | replication initiator protein A | - |
| SP70585_RS05330 () | 984527..985882 | + | 1356 | WP_000670038.1 | DNA (cytosine-5-)-methyltransferase | - |
| SP70585_RS05335 () | 985866..986294 | + | 429 | WP_001050388.1 | hypothetical protein | - |
| SP70585_RS05340 () | 986305..986688 | + | 384 | WP_000895331.1 | hypothetical protein | - |
| SP70585_RS05345 () | 986697..986930 | + | 234 | WP_001005709.1 | hypothetical protein | - |
| SP70585_RS05350 () | 986933..987517 | + | 585 | WP_000619433.1 | CPBP family intramembrane metalloprotease | - |
| SP70585_RS05355 () | 987594..988082 | + | 489 | WP_041170981.1 | hypothetical protein | - |
| SP70585_RS05360 () | 988118..989899 | + | 1782 | WP_000521774.1 | type IV secretory system conjugative DNA transfer family protein | - |
| SP70585_RS05365 () | 989917..990159 | + | 243 | WP_001072179.1 | hypothetical protein | - |
| SP70585_RS05370 () | 990178..991032 | + | 855 | WP_000980127.1 | conjugal transfer protein TrbL | - |
| SP70585_RS05375 () | 991094..991447 | + | 354 | WP_001097583.1 | PrgI family protein | - |
| SP70585_RS05380 () | 991404..993729 | + | 2326 | Protein_1018 | AAA family ATPase | - |
| SP70585_RS05385 () | 993731..996532 | + | 2802 | WP_000656700.1 | CHAP domain-containing protein | - |
| SP70585_RS05390 () | 996600..997202 | + | 603 | WP_000065336.1 | hypothetical protein | - |
| SP70585_RS12430 () | 997571..998934 | + | 1364 | Protein_1021 | transposase | - |
| SP70585_RS12435 () | 999172..999306 | - | 135 | Protein_1022 | transposase family protein | - |
| SP70585_RS05415 () | 999627..1000580 | - | 954 | WP_001155351.1 | IS30 family transposase ISSpn8 | Transposase |
| SP70585_RS13175 () | 1000939..1001753 | - | 815 | Protein_1024 | IS5 family transposase IS1515 | Transposase |
| SP70585_RS05430 () | 1001794..1002345 | - | 552 | Protein_1025 | tyrosine-protein phosphatase | - |
| SP70585_RS05435 () | 1002590..1003222 | + | 633 | WP_041170960.1 | chloramphenicol acetyltransferase | - |
| SP70585_RS05440 () | 1003290..1004927 | + | 1638 | WP_000021543.1 | methionine--tRNA ligase | - |
| SP70585_RS05445 () | 1005028..1005579 | + | 552 | Protein_1028 | tyrosine-protein phosphatase | - |
| SP70585_RS13190 () | 1005620..1006434 | + | 815 | Protein_1029 | IS5 family transposase IS1515 | Transposase |
| SP70585_RS05460 () | 1006450..1006668 | + | 219 | Protein_1030 | tyrosine-protein phosphatase | - |
| SP70585_RS05465 () | 1007685..1008677 | + | 993 | WP_024266136.1 | ABC transporter ATP-binding protein NatA | VF |
| SP70585_RS05470 () | 1008679..1009498 | + | 820 | Protein_1032 | ABC-2 family transporter protein | - |
| SP70585_RS05475 () | 1009500..1010285 | + | 786 | WP_000760754.1 | ABC transporter permease | - |
| SP70585_RS12445 () | 1010664..1011859 | - | 1196 | Protein_1034 | IS110 family transposase | - |
| SP70585_RS05495 () | 1012361..1012564 | + | 204 | WP_000275922.1 | helix-turn-helix transcriptional regulator | - |
| SP70585_RS13605 () | 1012695..1012847 | + | 153 | WP_001812617.1 | hypothetical protein | - |
| SP70585_RS12455 () | 1013014..1014815 | + | 1802 | Protein_1037 | hypothetical protein ; Integrase | Integrase |
| SP70585_RS05505 () | 1014763..1015083 | + | 321 | Protein_1038 | hypothetical protein | - |
| SP70585_RS05510 () | 1015297..1015530 | + | 234 | WP_000710809.1 | hypothetical protein | - |
| SP70585_RS05515 () | 1015821..1016039 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| SP70585_RS05520 () | 1016043..1016312 | + | 270 | WP_000175447.1 | hypothetical protein | - |
| SP70585_RS05525 () | 1016433..1017458 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SP70585_RS05530 () | 1017448..1018455 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| SP70585_RS05535 () | 1018455..1019462 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| SP70585_RS05540 () | 1019462..1020256 | + | 795 | WP_000677519.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| SP70585_RS12460 () | 1020644..1021033 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| SP70585_RS13610 () | 1020999..1021313 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| SP70585_RS05555 () | 1021997..1022158 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| SP70585_RS05560 () | 1022250..1023929 | + | 1680 | WP_000031833.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| SP70585_RS05565 () | 1024197..1024763 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| SP70585_RS05570 () | 1025085..1025273 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| SP70585_RS05575 () | 1025335..1026093 | + | 759 | WP_000262030.1 | ATP-grasp domain-containing protein | - |
| SP70585_RS05580 () | 1026151..1027005 | + | 855 | WP_000901912.1 | ADP-ribosylglycohydrolase family protein | - |
| SP70585_RS05585 () | 1027117..1028001 | + | 885 | WP_000757475.1 | diacylglycerol kinase family lipid kinase | - |
| SP70585_RS12465 () | 1028140..1028241 | + | 102 | WP_096376117.1 | alpha amylase N-terminal ig-like domain-containing protein | - |
| SP70585_RS05590 () | 1028305..1029903 | + | 1599 | WP_012677142.1 | glycoside hydrolase family 13 protein | - |
| SP70585_RS05600 () | 1030178..1030633 | + | 456 | WP_000500472.1 | hypothetical protein | - |
| SP70585_RS05605 () | 1031078..1031554 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SP70585_RS05610 () | 1031554..1032315 | + | 762 | WP_000405355.1 | zeta toxin family protein | Toxin Detail |
| SP70585_RS05615 () | 1032343..1033500 | + | 1158 | WP_001213950.1 | hypothetical protein | - |
| SP70585_RS05625 () | 1034332..1034691 | + | 360 | WP_000529544.1 | hypothetical protein | - |
| SP70585_RS05630 () | 1034701..1035066 | + | 366 | WP_000263052.1 | MobC family plasmid mobilization relaxosome protein | - |
| SP70585_RS12470 () | 1035053..1036887 | + | 1835 | Protein_1063 | relaxase/mobilization nuclease domain-containing protein | - |
| SP70585_RS05645 () | 1037153..1038118 | + | 966 | WP_000974693.1 | D-alanine--D-alanine ligase | - |
| SP70585_RS05650 () | 1038183..1038419 | + | 237 | WP_041170961.1 | hypothetical protein | - |
| SP70585_RS13195 () | 1038517..1038639 | + | 123 | Protein_1066 | ISL3 family transposase | - |
| SP70585_RS05660 () | 1038902..1039330 | + | 429 | WP_000348721.1 | GNAT family N-acetyltransferase | - |
| SP70585_RS05665 () | 1039409..1039996 | + | 588 | WP_000509391.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| SP70585_RS05670 () | 1040278..1040530 | + | 253 | Protein_1069 | aminoglycoside phosphotransferase | - |
| SP70585_RS12485 () | 1040706..1040959 | + | 254 | Protein_1070 | transposase family protein | - |
| SP70585_RS05675 () | 1041087..1042316 | + | 1230 | WP_000703361.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| SP70585_RS05680 () | 1042336..1045032 | + | 2697 | WP_000058195.1 | phosphoenolpyruvate carboxylase | - |
| SP70585_RS05685 () | 1045445..1046449 | + | 1005 | WP_000792163.1 | hypothetical protein | VF |
| SP70585_RS05690 () | 1046518..1047384 | + | 867 | WP_000637234.1 | ABC transporter permease | - |
| SP70585_RS05695 () | 1047381..1048139 | + | 759 | WP_000125400.1 | ABC transporter ATP-binding protein | - |
| SP70585_RS05700 () | 1048229..1049989 | + | 1761 | WP_000227907.1 | DNA primase | - |
| SP70585_RS05705 () | 1049992..1051101 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| SP70585_RS05710 () | 1051115..1051444 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| SP70585_RS05715 () | 1051559..1052602 | + | 1044 | WP_000412279.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| SP70585_RS05720 () | 1052618..1053943 | + | 1326 | WP_001219427.1 | glycosyltransferase family 4 protein | - |
| SP70585_RS05725 () | 1053974..1054150 | + | 177 | WP_001256250.1 | PspC domain-containing protein | - |
| SP70585_RS05730 () | 1054209..1054343 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| SP70585_RS05735 () | 1054407..1055717 | + | 1311 | WP_000061642.1 | GTPase ObgE | - |
| SP70585_RS05740 () | 1055727..1055885 | + | 159 | WP_001808548.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|