MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68709 bp
Accession: NC_012109 Location: 1..68709 Organism: Desulfobacterium autotrophicum HRM2 Replicon: plasmid pHRM2a
Accession: NC_012109 Location: 1..68709 Organism: Desulfobacterium autotrophicum HRM2 Replicon: plasmid pHRM2a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRM2_RS24470 () | 181..1002 | + | 822 | WP_012663290.1 | AAA family ATPase | - |
| HRM2_RS24475 () | 1004..2293 | + | 1290 | WP_012663291.1 | hypothetical protein | - |
| HRM2_RS24480 () | 2491..2688 | - | 198 | WP_012663293.1 | hypothetical protein | - |
| HRM2_RS26800 () | 2843..3109 | - | 267 | WP_012663295.1 | hypothetical protein | - |
| HRM2_RS24490 () | 3194..3511 | + | 318 | WP_012663296.1 | hypothetical protein | - |
| HRM2_RS24495 () | 3574..4053 | + | 480 | WP_041274330.1 | hypothetical protein | - |
| HRM2_RS24500 () | 6489..6770 | - | 282 | WP_012663299.1 | hypothetical protein | - |
| HRM2_RS25710 () | 6898..8637 | + | 1740 | WP_049770554.1 | Mobilization protein A | Relaxase |
| HRM2_RS24510 () | 9080..10036 | - | 957 | WP_012663302.1 | hypothetical protein | - |
| HRM2_RS27275 () | 10304..10474 | + | 171 | WP_012663303.1 | hypothetical protein | - |
| HRM2_RS24515 () | 10493..11164 | + | 672 | Protein_10 | metallophosphoesterase | - |
| HRM2_RS27280 () | 11315..11851 | - | 537 | WP_012663305.1 | DNA primase | - |
| HRM2_RS24525 () | 11860..12600 | - | 741 | WP_012663306.1 | IS21 family transposase IS712 | Transposase |
| HRM2_RS24530 () | 12593..14095 | - | 1503 | WP_012663307.1 | helix-turn-helix domain-containing protein | - |
| HRM2_RS24535 () | 14052..14975 | - | 924 | WP_012663308.1 | chromosome partitioning protein ParB | - |
| HRM2_RS25715 () | 15062..15403 | - | 342 | WP_148214755.1 | hypothetical protein | - |
| HRM2_RS25720 () | 16807..19959 | + | 3153 | WP_012663312.1 | cache domain-containing protein | - |
| HRM2_RS24550 () | 19952..20698 | + | 747 | WP_012663313.1 | PAS domain-containing protein | - |
| HRM2_RS25725 () | 21262..23910 | + | 2649 | WP_049770555.1 | Sensor kinase CckA | VF |
| HRM2_RS24565 () | 24333..24893 | + | 561 | WP_012663315.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HRM2_RS24570 () | 24917..25237 | - | 321 | WP_012663316.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| HRM2_RS24575 () | 25243..25575 | - | 333 | WP_148214839.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HRM2_RS26355 () | 25991..26635 | - | 645 | Protein_22 | DUF4158 domain-containing protein | - |
| HRM2_RS24590 () | 26783..27025 | + | 243 | Protein_23 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HRM2_RS25730 () | 27201..27860 | - | 660 | WP_012663322.1 | response regulator | - |
| HRM2_RS25735 () | 27986..31936 | - | 3951 | WP_012663323.1 | PAS domain S-box protein | - |
| HRM2_RS24605 () | 32320..33960 | - | 1641 | WP_012663325.1 | IS1634 family transposase ISCwa1 | Transposase |
| HRM2_RS24610 () | 34338..34946 | + | 609 | WP_012663326.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HRM2_RS24615 () | 35540..35737 | + | 198 | WP_012663327.1 | helix-turn-helix domain-containing protein | - |
| HRM2_RS24620 () | 35734..38973 | + | 3240 | WP_012663328.1 | DEAD/DEAH box helicase family protein | - |
| HRM2_RS24625 () | 38963..39727 | + | 765 | WP_012663329.1 | DUF4391 domain-containing protein | - |
| HRM2_RS24630 () | 39744..41648 | + | 1905 | WP_012663330.1 | site-specific DNA-methyltransferase | - |
| HRM2_RS24635 () | 41650..42039 | + | 390 | Protein_32 | DEAD/DEAH box helicase family protein | - |
| HRM2_RS26815 () | 42645..42734 | - | 90 | Protein_33 | hypothetical protein | - |
| HRM2_RS24645 () | 42935..43834 | - | 900 | WP_012663333.1 | helix-turn-helix domain-containing protein | - |
| HRM2_RS24650 () | 44162..44461 | - | 300 | WP_012663335.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HRM2_RS24655 () | 44451..44675 | - | 225 | WP_012663336.1 | addiction module protein | - |
| HRM2_RS24660 () | 44734..45306 | - | 573 | WP_012663337.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HRM2_RS24665 () | 45684..46268 | - | 585 | WP_012663338.1 | hypothetical protein | - |
| HRM2_RS24670 () | 46572..47411 | - | 840 | WP_012663339.1 | hypothetical protein | - |
| HRM2_RS24675 () | 47533..48057 | - | 525 | Protein_40 | DUF4357 domain-containing protein | - |
| HRM2_RS26820 () | 48392..48481 | - | 90 | Protein_41 | hypothetical protein | - |
| HRM2_RS24685 () | 48682..49581 | - | 900 | WP_012663333.1 | helix-turn-helix domain-containing protein | - |
| HRM2_RS24690 () | 49909..50208 | - | 300 | WP_012663335.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HRM2_RS24695 () | 50198..50422 | - | 225 | WP_012663336.1 | addiction module protein | - |
| HRM2_RS24700 () | 50481..51053 | - | 573 | WP_012663337.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HRM2_RS24705 () | 51431..52015 | - | 585 | WP_012663340.1 | hypothetical protein | - |
| HRM2_RS24710 () | 52319..53158 | - | 840 | WP_012663339.1 | hypothetical protein | - |
| HRM2_RS24715 () | 53280..54167 | - | 888 | WP_012663341.1 | GIY-YIG nuclease family protein | - |
| HRM2_RS25740 () | 54238..54846 | - | 609 | WP_012663342.1 | hypothetical protein | - |
| HRM2_RS24730 () | 55360..55866 | - | 507 | WP_012663345.1 | hypothetical protein | - |
| HRM2_RS24735 () | 55884..56402 | - | 519 | WP_012663346.1 | hypothetical protein | - |
| HRM2_RS24740 () | 56564..56935 | - | 372 | WP_012663347.1 | transcriptional regulator | - |
| HRM2_RS24745 () | 56945..57238 | - | 294 | WP_012663348.1 | type II toxin-antitoxin system HigB family toxin | - |
| HRM2_RS24750 () | 57441..57869 | - | 429 | WP_012663349.1 | hypothetical protein | - |
| HRM2_RS24755 () | 58914..60059 | - | 1146 | WP_012663351.1 | HEAT repeat domain-containing protein | - |
| HRM2_RS24760 () | 60230..60730 | - | 501 | WP_012663352.1 | TIR domain-containing protein | - |
| HRM2_RS24765 () | 60740..61138 | - | 399 | WP_012663353.1 | hypothetical protein | - |
| HRM2_RS24770 () | 61757..62401 | - | 645 | WP_012663354.1 | hypothetical protein | - |
| HRM2_RS24775 () | 62654..63475 | - | 822 | WP_012663355.1 | hypothetical protein | ARG |
| HRM2_RS24780 () | 63617..64489 | - | 873 | WP_012663356.1 | transposase | - |
| HRM2_RS24785 () | 64962..65975 | - | 1014 | WP_041274335.1 | hypothetical protein | - |
| HRM2_RS24790 () | 66660..67328 | - | 669 | Protein_62 | metallophosphoesterase | - |
| HRM2_RS26370 () | 67411..67494 | + | 84 | WP_083776671.1 | DUF4113 domain-containing protein | - |
| HRM2_RS27285 () | 67605..68582 | - | 978 | WP_012663359.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|