MGE detailed information
MGE type: Genomic_island MGE length: 21013 bp
Accession: NC_011993 Location: 1532928..1553940 Organism: Escherichia coli LF82 Replicon: chromosome
Accession: NC_011993 Location: 1532928..1553940 Organism: Escherichia coli LF82 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LF82_RS07655 () | 1528689..1530089 | - | 1401 | WP_000358943.1 | glutamate decarboxylase | - |
| LF82_RS07665 () | 1530451..1531608 | - | 1158 | Protein_1457 | insulinase family protein | - |
| LF82_RS25645 () | 1531628..1531753 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| LF82_RS07670 () | 1531719..1532876 | - | 1158 | WP_001445446.1 | anaerobic sulfatase maturase | - |
| LF82_RS07675 () | 1532928..1534610 | - | 1683 | WP_001296072.1 | sulfatase | - |
| LF82_RS07680 () | 1535012..1535773 | - | 762 | WP_000060473.1 | acid stress response transcriptional regulator YdeO | - |
| LF82_RS07685 () | 1535849..1536046 | - | 198 | WP_001445447.1 | two-component system connector SafA | - |
| LF82_RS07690 () | 1536294..1538573 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| LF82_RS07695 () | 1538912..1539826 | - | 915 | WP_000520591.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| LF82_RS07700 () | 1539886..1540389 | - | 504 | WP_000825470.1 | Protein FimG | VF |
| LF82_RS07705 () | 1540402..1540932 | - | 531 | WP_000876774.1 | Protein FimF | VF |
| LF82_RS07710 () | 1540946..1543597 | - | 2652 | WP_014640148.1 | Outer membrane usher protein FimD | VF |
| LF82_RS07715 () | 1543639..1544349 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| LF82_RS07720 () | 1544711..1545274 | - | 564 | WP_001296074.1 | Type-1 fimbrial protein, A chain | VF |
| LF82_RS07730 () | 1546050..1546832 | - | 783 | WP_001221834.1 | SDR family oxidoreductase | - |
| LF82_RS07735 () | 1546981..1547874 | + | 894 | Protein_1471 | HTH-type transcriptional regulator PgrR | VF |
| LF82_RS07740 () | 1548123..1549187 | - | 1065 | WP_000859695.1 | alpha/beta fold hydrolase | - |
| LF82_RS07745 () | 1549345..1550106 | - | 762 | WP_001066621.1 | carboxymuconolactone decarboxylase family protein | - |
| LF82_RS07750 () | 1550084..1550563 | - | 480 | WP_015912499.1 | cupin domain-containing protein | - |
| LF82_RS07755 () | 1550568..1551203 | - | 636 | WP_044069244.1 | Transcriptional activator protein CopR | VF |
| LF82_RS25955 () | 1551252..1552024 | + | 773 | Protein_1476 | alpha/beta hydrolase | - |
| LF82_RS07765 () | 1552334..1553656 | - | 1323 | WP_001125432.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| LF82_RS07770 () | 1553656..1553922 | - | 267 | WP_001304368.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| LF82_RS07775 () | 1554230..1554988 | + | 759 | WP_001286542.1 | trans-aconitate 2-methyltransferase | - |
| LF82_RS07780 () | 1554992..1555906 | - | 915 | WP_001313828.1 | bestrophin family inner membrane protein | - |
| LF82_RS07790 () | 1556103..1557554 | - | 1452 | WP_000854639.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA10098 | NZ_CP007799 | 1694571..1711514 | 0.01 |