MGE detailed information
MGE type: Prophage MGE length: 34917 bp
Accession: NC_011989 Location: 1611015..1645931 Organism: Agrobacterium vitis S4 Replicon: chromosome
Accession: NC_011989 Location: 1611015..1645931 Organism: Agrobacterium vitis S4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI_RS07585 () | 1607817..1608410 | + | 594 | WP_085946625.1 | DnaJ domain-containing protein | - |
| AVI_RS30480 () | 1608510..1608713 | + | 204 | WP_139192370.1 | hypothetical protein | - |
| AVI_RS30485 () | 1608813..1609625 | + | 813 | WP_139192369.1 | helix-turn-helix transcriptional regulator | - |
| AVI_RS07595 () | 1609647..1610378 | - | 732 | WP_015915816.1 | lipoyl(octanoyl) transferase LipB | - |
| AVI_RS07605 () | 1611039..1612052 | + | 1014 | WP_187152382.1 | ABC transporter permease | - |
| AVI_RS07610 () | 1612077..1613144 | - | 1068 | WP_049777160.1 | hypothetical protein ; Integrase | Integrase |
| AVI_RS07620 () | 1614155..1615162 | - | 1008 | WP_015915819.1 | hypothetical protein | - |
| AVI_RS07625 () | 1615576..1616190 | - | 615 | WP_015915820.1 | LexA family transcriptional regulator | - |
| AVI_RS07630 () | 1616278..1616529 | + | 252 | WP_041696500.1 | hypothetical protein | - |
| AVI_RS07635 () | 1616745..1617242 | + | 498 | WP_015915821.1 | hypothetical protein | - |
| AVI_RS07640 () | 1617239..1617475 | + | 237 | WP_041696502.1 | hypothetical protein | - |
| AVI_RS07645 () | 1617561..1618121 | + | 561 | WP_015915822.1 | hypothetical protein | - |
| AVI_RS07650 () | 1618118..1618411 | + | 294 | WP_015915823.1 | hypothetical protein | - |
| AVI_RS07655 () | 1618411..1619691 | + | 1281 | WP_041697883.1 | helix-turn-helix domain-containing protein | - |
| AVI_RS07660 () | 1619678..1620334 | + | 657 | WP_015915825.1 | transcriptional antiterminator | - |
| AVI_RS30490 () | 1620559..1620768 | - | 210 | WP_139192368.1 | hypothetical protein | - |
| AVI_RS07670 () | 1621003..1621470 | + | 468 | WP_015915826.1 | P27 family phage terminase small subunit | - |
| AVI_RS07675 () | 1621586..1623268 | + | 1683 | WP_197522874.1 | terminase large subunit | - |
| AVI_RS07680 () | 1623281..1624588 | + | 1308 | WP_015915828.1 | phage portal protein | - |
| AVI_RS07685 () | 1624563..1625159 | + | 597 | WP_015915829.1 | HK97 family phage prohead protease | - |
| AVI_RS07690 () | 1625201..1626472 | + | 1272 | WP_041696504.1 | phage major capsid protein | - |
| AVI_RS07695 () | 1626533..1626814 | + | 282 | WP_041696506.1 | hypothetical protein | - |
| AVI_RS07700 () | 1626811..1627359 | + | 549 | WP_015915831.1 | hypothetical protein | - |
| AVI_RS07705 () | 1627359..1627556 | + | 198 | WP_041696508.1 | hypothetical protein | - |
| AVI_RS07710 () | 1627531..1627893 | + | 363 | WP_041696509.1 | head-tail adaptor protein | - |
| AVI_RS07715 () | 1627890..1628351 | + | 462 | WP_015915832.1 | HK97 gp10 family phage protein | - |
| AVI_RS07720 () | 1628348..1628755 | + | 408 | WP_015915833.1 | DUF3168 domain-containing protein | - |
| AVI_RS07725 () | 1628782..1629225 | + | 444 | WP_015915834.1 | hypothetical protein | - |
| AVI_RS07730 () | 1629222..1629605 | + | 384 | WP_041697891.1 | gene transfer agent family protein | - |
| AVI_RS07740 () | 1629965..1630828 | - | 864 | WP_015915835.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| AVI_RS07745 () | 1630906..1631811 | - | 906 | WP_015915836.1 | dTDP-4-dehydrorhamnose reductase | - |
| AVI_RS07750 () | 1631808..1632866 | - | 1059 | WP_015915837.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| AVI_RS07755 () | 1632921..1633484 | - | 564 | WP_015915838.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| AVI_RS07765 () | 1633917..1636664 | + | 2748 | WP_015915840.1 | phage tail tape measure protein | - |
| AVI_RS07770 () | 1636661..1637287 | + | 627 | WP_015915841.1 | hypothetical protein | - |
| AVI_RS07775 () | 1637287..1637973 | + | 687 | WP_015915842.1 | hypothetical protein | - |
| AVI_RS07780 () | 1637966..1638397 | + | 432 | WP_041696513.1 | GNAT family N-acetyltransferase | - |
| AVI_RS29000 () | 1638411..1642955 | + | 4545 | WP_049777163.1 | phage tail protein | - |
| AVI_RS07795 () | 1642952..1644448 | + | 1497 | WP_015915844.1 | hypothetical protein | - |
| AVI_RS29005 () | 1644464..1645069 | + | 606 | WP_015915845.1 | hypothetical protein | - |
| AVI_RS07810 () | 1645073..1645312 | + | 240 | WP_041696515.1 | hypothetical protein | - |
| AVI_RS07815 () | 1645317..1645670 | - | 354 | WP_041696517.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| AVI_RS07820 () | 1645680..1645931 | - | 252 | WP_015915847.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AVI_RS07825 () | 1646017..1646625 | + | 609 | WP_139192395.1 | hypothetical protein | - |
| AVI_RS07830 () | 1646622..1646864 | + | 243 | WP_041696518.1 | hypothetical protein | - |
| AVI_RS07835 () | 1646861..1647298 | + | 438 | WP_015915849.1 | hypothetical protein | - |
| AVI_RS31045 () | 1647327..1647485 | + | 159 | WP_156753142.1 | hypothetical protein | - |
| AVI_RS29010 () | 1647482..1647868 | + | 387 | WP_015915850.1 | hypothetical protein | - |
| AVI_RS07845 () | 1647964..1649505 | - | 1542 | WP_015915851.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|