MGE detailed information
MGE type: Prophage MGE length: 23436 bp
Accession: NC_011761 Location: 1182262..1205697 Organism: Acidithiobacillus ferrooxidans ATCC 23270 Replicon: chromosome
Accession: NC_011761 Location: 1182262..1205697 Organism: Acidithiobacillus ferrooxidans ATCC 23270 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFE_RS06390 () | 1177463..1177891 | + | 429 | WP_012607032.1 | type II toxin-antitoxin system VapC family toxin | - |
| AFE_RS15360 () | 1178048..1178452 | + | 405 | WP_012607033.1 | nucleotidyltransferase domain-containing protein | - |
| AFE_RS06400 () | 1178442..1178882 | + | 441 | WP_012607030.1 | HEPN domain-containing protein | - |
| AFE_RS06405 () | 1179203..1180618 | + | 1416 | WP_012607034.1 | HNH endonuclease | - |
| AFE_RS06410 () | 1180676..1182118 | + | 1443 | WP_012607035.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
| AFE_RS06415 () | 1182262..1182489 | + | 228 | WP_012607036.1 | DUF433 domain-containing protein | - |
| AFE_RS06420 () | 1182486..1182839 | + | 354 | WP_012607037.1 | DUF5615 family PIN-like protein | - |
| AFE_RS06425 () | 1182968..1183201 | + | 234 | WP_041645783.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| AFE_RS06430 () | 1183198..1183668 | + | 471 | WP_201763905.1 | PIN domain-containing protein | - |
| AFE_RS06435 () | 1183665..1185119 | + | 1455 | WP_012607039.1 | hypothetical protein | VF |
| AFE_RS06440 () | 1185141..1189286 | + | 4146 | WP_012607040.1 | DEAD/DEAH box helicase | - |
| AFE_RS06445 () | 1189572..1190810 | - | 1239 | WP_041645788.1 | hypothetical protein | VF |
| AFE_RS06450 () | 1191240..1191998 | - | 759 | WP_012607042.1 | IS21 family transposase ISAfe12 | Transposase |
| AFE_RS06455 () | 1192016..1192792 | - | 777 | Protein_1230 | IS21 family transposase ISAfe12 | Transposase |
| AFE_RS06460 () | 1192837..1193109 | + | 273 | WP_148208621.1 | Y4bD/Y4pK family protein | - |
| AFE_RS06465 () | 1193241..1193738 | + | 498 | WP_201763906.1 | helix-turn-helix domain-containing protein | - |
| AFE_RS06470 () | 1194000..1196084 | + | 2085 | WP_012607045.1 | hypothetical protein ; Integrase | Integrase |
| AFE_RS15610 () | 1196094..1196840 | - | 747 | Protein_1234 | IS21 family transposase ISAfe12 | Transposase |
| AFE_RS16340 () | 1197071..1197208 | - | 138 | WP_158303823.1 | IS1380 family transposase ISLefe1 | Transposase |
| AFE_RS06485 () | 1197505..1197720 | - | 216 | WP_012607049.1 | hypothetical protein | - |
| AFE_RS06490 () | 1197717..1198037 | - | 321 | WP_041645796.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AFE_RS06495 () | 1198034..1198342 | - | 309 | WP_049759499.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AFE_RS06500 () | 1198443..1200025 | - | 1583 | Protein_1239 | SAM-dependent DNA methyltransferase | - |
| AFE_RS16585 () | 1200090..1200248 | + | 159 | WP_201763907.1 | hypothetical protein | - |
| AFE_RS06505 () | 1200631..1201767 | + | 1137 | WP_012536490.1 | FIST C-terminal domain-containing protein | - |
| AFE_RS06510 () | 1201846..1203603 | + | 1758 | WP_012536491.1 | ATP-binding/permease protein CydD | VF |
| AFE_RS06515 () | 1203596..1205353 | + | 1758 | WP_009566343.1 | thiol reductant ABC exporter subunit CydC | - |
| AFE_RS06520 () | 1205350..1205697 | - | 348 | WP_009566341.1 | hypothetical protein | - |
| AFE_RS06525 () | 1205701..1206666 | - | 966 | WP_012536492.1 | folate-binding protein YgfZ | - |
| AFE_RS06530 () | 1206683..1207180 | + | 498 | WP_012536493.1 | hypothetical protein | - |
| AFE_RS06535 () | 1207125..1208714 | - | 1590 | WP_012536494.1 | L-aspartate oxidase | - |
| AFE_RS06540 () | 1208843..1209457 | + | 615 | WP_201763910.1 | RNA polymerase sigma factor RpoE | - |
| AFE_RS06545 () | 1209454..1210116 | + | 663 | WP_009561171.1 | sigma-E factor negative regulatory protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|