MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 55150 bp
Accession: NC_011743 Location: 1..55150 Organism: Escherichia fergusonii ATCC 35469 Replicon: plasmid pEFER
Accession: NC_011743 Location: 1..55150 Organism: Escherichia fergusonii ATCC 35469 Replicon: plasmid pEFER
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFER_RS00005 () | 450..1316 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| EFER_RS00010 () | 1532..1834 | - | 303 | Protein_1 | hypothetical protein | - |
| EFER_RS00015 () | 2249..3454 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| EFER_RS00020 () | 3454..4428 | + | 975 | WP_000064120.1 | ParB/RepB/Spo0J family partition protein | - |
| EFER_RS00025 () | 4510..5781 | - | 1272 | WP_000457558.1 | Y-family DNA polymerase | - |
| EFER_RS00030 () | 5781..6212 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EFER_RS00035 () | 6509..7309 | + | 801 | Protein_6 | group II intron reverse transcriptase/maturase | - |
| EFER_RS00045 () | 7461..8158 | + | 698 | Protein_7 | IS1 family transposase | - |
| EFER_RS22560 () | 8168..8476 | + | 309 | Protein_8 | replication initiation protein | - |
| EFER_RS00050 () | 9620..10588 | + | 969 | WP_000654802.1 | IS5 family transposase IS903B | Transposase |
| EFER_RS23940 () | 10646..10729 | - | 84 | Protein_10 | SOS response-associated peptidase | - |
| EFER_RS00055 () | 11450..12061 | + | 612 | Protein_11 | IS3 family transposase ISRaq1 | Transposase |
| EFER_RS23950 () | 12093..12272 | - | 180 | WP_012600012.1 | hypothetical protein | - |
| EFER_RS23955 () | 12496..12813 | + | 318 | WP_032156934.1 | hypothetical protein | - |
| EFER_RS00070 () | 12882..13808 | + | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| EFER_RS00075 () | 13818..14417 | + | 600 | WP_001021938.1 | DUF1819 family protein | - |
| EFER_RS00080 () | 14414..14998 | + | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| EFER_RS00085 () | 15017..18694 | + | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| EFER_RS00090 () | 18711..20474 | + | 1764 | WP_000283751.1 | DUF262 domain-containing protein | - |
| EFER_RS00095 () | 20490..24143 | + | 3654 | WP_001095615.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| EFER_RS00100 () | 24143..26800 | + | 2658 | WP_001167230.1 | BREX-1 system phosphatase PglZ type A | - |
| EFER_RS00105 () | 26817..28892 | + | 2076 | WP_000205526.1 | protease Lon-related BREX system protein BrxL | - |
| EFER_RS00110 () | 29000..29185 | - | 186 | Protein_22 | IS110 family transposase ISEc21 | Transposase |
| EFER_RS22570 () | 29185..29715 | - | 531 | Protein_23 | IS110 family transposase ISEc21 | Transposase |
| EFER_RS00115 () | 29749..32634 | - | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| EFER_RS00120 () | 32760..33383 | + | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| EFER_RS23960 () | 33414..34376 | + | 963 | Protein_26 | IS3 family transposase IS1133 | Transposase |
| EFER_RS00135 () | 34376..37381 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| EFER_RS00140 () | 37545..38102 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EFER_RS00145 () | 38285..39145 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| EFER_RS22575 () | 39294..39854 | + | 561 | Protein_30 | IS4 family transposase IS10R | Transposase |
| EFER_RS00150 () | 39864..40235 | - | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| EFER_RS00155 () | 40368..40961 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| EFER_RS00160 () | 41074..42279 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| EFER_RS00165 () | 42361..42984 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| EFER_RS00170 () | 42962..43648 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| EFER_RS00175 () | 43656..44042 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| EFER_RS00180 () | 44035..44355 | - | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| EFER_RS00185 () | 44799..46004 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| EFER_RS22580 () | 46235..46354 | + | 120 | Protein_39 | LysR family transcriptional regulator | - |
| EFER_RS00190 () | 46370..47578 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| EFER_RS00195 () | 47864..48667 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| EFER_RS00200 () | 48667..49503 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| EFER_RS00205 () | 49610..50041 | - | 432 | Protein_43 | IS110 family transposase ISEc21 | Transposase |
| EFER_RS23970 () | 50323..51179 | - | 857 | Protein_44 | IS3 family transposase ISEc15 | Transposase |
| EFER_RS00220 () | 51383..51799 | - | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EFER_RS00225 () | 51796..52026 | - | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EFER_RS00235 () | 52600..52950 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| EFER_RS00240 () | 53001..53744 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| EFER_RS00245 () | 53741..54517 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| EFER_RS00250 () | 54575..54832 | - | 258 | WP_000764641.1 | hypothetical protein | - |
| EFER_RS24400 () | 54961..55065 | - | 105 | WP_032409716.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|