MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NC_011742 Location: 264478..285159 Organism: Escherichia coli S88 Replicon: chromosome
Accession: NC_011742 Location: 264478..285159 Organism: Escherichia coli S88 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECS88_RS02085 () | 260593..261018 | - | 426 | WP_000946067.1 | type VI secretion system baseplate subunit TssE | - |
| ECS88_RS02090 () | 261023..262507 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| ECS88_RS02095 () | 262530..263033 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| ECS88_RS02100 () | 263739..264257 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| ECS88_RS02105 () | 264478..266460 | + | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| ECS88_RS02110 () | 266567..267613 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| ECS88_RS02115 () | 267606..269045 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| ECS88_RS02120 () | 269020..269310 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| ECS88_RS02125 () | 269568..270332 | + | 765 | Protein_240 | ISAs1 family transposase ISEc1 | Transposase |
| ECS88_RS02130 () | 270561..271064 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| ECS88_RS02135 () | 271158..271646 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| ECS88_RS02140 () | 271672..271866 | + | 195 | Protein_243 | transposase | - |
| ECS88_RS02145 () | 271917..272687 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| ECS88_RS02150 () | 272868..273314 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| ECS88_RS02155 () | 273357..275801 | - | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| ECS88_RS02160 () | 276041..276619 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| ECS88_RS02165 () | 276824..277591 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| ECS88_RS02170 () | 277562..278302 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| ECS88_RS02175 () | 278614..279363 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| ECS88_RS02180 () | 279539..280036 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| ECS88_RS27160 () | 280119..280277 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| ECS88_RS02185 () | 280356..282068 | - | 1713 | Protein_253 | Flagellar biosynthesis protein FlhA | VF |
| ECS88_RS02190 () | 282040..282825 | + | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| ECS88_RS02195 () | 282896..283951 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| ECS88_RS02200 () | 284003..284296 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| ECS88_RS02205 () | 284299..284697 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| ECS88_RS02210 () | 284707..285159 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| ECS88_RS02215 () | 285349..286488 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| ECS88_RS02220 () | 286485..287099 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| ECS88_RS02225 () | 287156..288613 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| ECS88_RS02230 () | 288874..289332 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 289928..290008 | + | 81 | NuclAT_4 | - | - |
| - () | 289928..290008 | + | 81 | NuclAT_4 | - | - |
| - () | 289928..290008 | + | 81 | NuclAT_4 | - | - |
| - () | 289928..290008 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|