MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 65448 bp
Accession: NC_011668 Location: 1..65448 Organism: Shewanella baltica OS223 Replicon: plasmid pS22302
Accession: NC_011668 Location: 1..65448 Organism: Shewanella baltica OS223 Replicon: plasmid pS22302
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBAL223_RS22525 () | 436..1416 | + | 981 | WP_012592928.1 | DUF1738 domain-containing protein | - |
| SBAL223_RS22530 () | 1589..2536 | - | 948 | WP_011847251.1 | IS30 family transposase ISSba17 | Transposase |
| SBAL223_RS22535 () | 2653..2835 | + | 183 | WP_150102370.1 | hypothetical protein | - |
| SBAL223_RS22540 () | 3410..3778 | + | 369 | WP_012592929.1 | hypothetical protein | - |
| SBAL223_RS22545 () | 3829..9789 | - | 5961 | WP_012592930.1 | Multifunctional conjugation protein TraI | Relaxase |
| SBAL223_RS22550 () | 9919..10074 | - | 156 | WP_041408707.1 | Hok/Gef family protein | - |
| SBAL223_RS22555 () | 10251..10430 | - | 180 | WP_012592932.1 | hypothetical protein | - |
| SBAL223_RS22560 () | 10427..10705 | - | 279 | WP_012592933.1 | hypothetical protein | - |
| SBAL223_RS22565 () | 10733..12856 | - | 2124 | WP_012592934.1 | type IV conjugative transfer system coupling protein TraD | - |
| SBAL223_RS22570 () | 12859..13392 | - | 534 | WP_012592935.1 | hypothetical protein | - |
| SBAL223_RS22575 () | 13430..16243 | - | 2814 | WP_012592936.1 | conjugal transfer mating pair stabilization protein TraG | - |
| SBAL223_RS22580 () | 16246..17634 | - | 1389 | WP_012592937.1 | conjugal transfer protein TraH | - |
| SBAL223_RS22590 () | 17830..18273 | - | 444 | WP_012592939.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| SBAL223_RS22595 () | 18270..19004 | - | 735 | WP_012592940.1 | hypothetical protein | - |
| SBAL223_RS22600 () | 19040..19915 | - | 876 | WP_012592941.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| SBAL223_RS22605 () | 19912..21729 | - | 1818 | WP_012592942.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| SBAL223_RS22610 () | 21726..22466 | - | 741 | WP_012197964.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| SBAL223_RS22615 () | 22489..23502 | - | 1014 | WP_012197965.1 | conjugal transfer pilus assembly protein TraU | - |
| SBAL223_RS22620 () | 23489..24193 | - | 705 | WP_012197898.1 | type-F conjugative transfer system protein TraW | - |
| SBAL223_RS22625 () | 24190..24561 | - | 372 | WP_012592943.1 | TrbI F-type domain-containing protein | - |
| SBAL223_RS22630 () | 24563..27151 | - | 2589 | WP_012592944.1 | type IV secretion system protein TraC | - |
| SBAL223_RS22635 () | 27155..27598 | - | 444 | WP_190273092.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SBAL223_RS22640 () | 27631..29157 | - | 1527 | WP_012592946.1 | conjugal transfer protein TraB | - |
| SBAL223_RS22645 () | 29154..29969 | - | 816 | WP_012592947.1 | type-F conjugative transfer system secretin TraK | - |
| SBAL223_RS22650 () | 29969..30535 | - | 567 | WP_012592948.1 | type IV conjugative transfer system protein TraE | - |
| SBAL223_RS22655 () | 30576..30878 | - | 303 | WP_012592949.1 | type IV conjugative transfer system protein TraL | - |
| SBAL223_RS22660 () | 30882..31253 | - | 372 | WP_012592950.1 | hypothetical protein | - |
| SBAL223_RS22665 () | 31308..31484 | - | 177 | WP_012197974.1 | TraY domain-containing protein | - |
| SBAL223_RS22670 () | 31623..32252 | + | 630 | WP_012592952.1 | helix-turn-helix domain-containing protein | - |
| SBAL223_RS22675 () | 32698..33432 | + | 735 | WP_012592953.1 | hypothetical protein | - |
| SBAL223_RS22680 () | 34178..34333 | + | 156 | WP_012592954.1 | Hok/Gef family protein | - |
| SBAL223_RS22685 () | 35053..35706 | + | 654 | WP_012592955.1 | class I SAM-dependent methyltransferase | - |
| SBAL223_RS24040 () | 35746..35844 | + | 99 | Protein_32 | transposase | - |
| SBAL223_RS22695 () | 36173..36847 | - | 675 | WP_080517146.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| SBAL223_RS23625 () | 36935..37051 | + | 117 | WP_080517147.1 | helix-turn-helix domain-containing protein | - |
| SBAL223_RS22700 () | 37238..37468 | - | 231 | Protein_35 | DNA helicase | - |
| SBAL223_RS22705 () | 37470..38612 | - | 1143 | WP_012592957.1 | SIR2 family protein | - |
| SBAL223_RS23155 () | 38622..39842 | - | 1221 | WP_012592958.1 | restriction endonuclease subunit S | - |
| SBAL223_RS22715 () | 39845..41323 | - | 1479 | WP_012592959.1 | type I restriction-modification system subunit M | - |
| SBAL223_RS22720 () | 41327..43177 | - | 1851 | WP_012592960.1 | ATP-binding protein | - |
| SBAL223_RS22725 () | 43179..45494 | - | 2316 | WP_012592961.1 | DEAD/DEAH box helicase family protein | - |
| SBAL223_RS22730 () | 45516..45731 | - | 216 | WP_005458449.1 | helix-turn-helix transcriptional regulator | - |
| SBAL223_RS22735 () | 46135..46311 | + | 177 | WP_012592962.1 | AlpA family phage regulatory protein | - |
| SBAL223_RS22740 () | 46425..47054 | - | 630 | WP_012592963.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| SBAL223_RS22745 () | 47297..47566 | + | 270 | WP_011979484.1 | hypothetical protein | - |
| SBAL223_RS22750 () | 47887..48225 | - | 339 | WP_150102369.1 | hypothetical protein | - |
| SBAL223_RS22755 () | 48330..49004 | - | 675 | WP_012592966.1 | ParA family protein | - |
| SBAL223_RS22760 () | 49441..50061 | + | 621 | WP_012592968.1 | DUF2913 family protein | - |
| SBAL223_RS22765 () | 50154..50426 | + | 273 | WP_012592969.1 | hypothetical protein | - |
| SBAL223_RS22770 () | 50806..51048 | + | 243 | WP_011979491.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| SBAL223_RS22775 () | 51038..51322 | + | 285 | WP_011979492.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SBAL223_RS22780 () | 51610..54864 | - | 3255 | WP_012592970.1 | type I restriction endonuclease subunit R | - |
| SBAL223_RS22785 () | 54861..56009 | - | 1149 | WP_012592971.1 | DUF4268 domain-containing protein | - |
| SBAL223_RS22790 () | 56027..57313 | - | 1287 | WP_012592972.1 | restriction endonuclease subunit S | - |
| SBAL223_RS22795 () | 57303..59006 | - | 1704 | WP_012592973.1 | type I restriction-modification system subunit M | - |
| SBAL223_RS22800 () | 59117..59713 | + | 597 | WP_012592974.1 | tyrosine-type recombinase/integrase | - |
| SBAL223_RS22805 () | 60143..61051 | + | 909 | WP_132785143.1 | Abi family protein | - |
| SBAL223_RS22810 () | 61456..61854 | - | 399 | WP_012592976.1 | H-NS histone family protein | - |
| SBAL223_RS22815 () | 62349..64223 | + | 1875 | WP_012592977.1 | ParB/RepB/Spo0J family partition protein | - |
| SBAL223_RS22820 () | 64365..64610 | + | 246 | WP_012592978.1 | type II toxin-antitoxin system HicA family toxin | - |
| SBAL223_RS22825 () | 64610..64945 | + | 336 | WP_041405604.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| SBAL223_RS22830 () | 64964..65308 | + | 345 | WP_012589048.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|