MGE detailed information
MGE type: Prophage MGE length: 59824 bp
Accession: NC_011601 Location: 1117747..1177570 Organism: Escherichia coli O127:H6 str. E2348/69 Replicon: chromosome
Accession: NC_011601 Location: 1117747..1177570 Organism: Escherichia coli O127:H6 str. E2348/69 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E2348C_RS05655 (E2348_C_1067) | 1114104..1114934 | + | 831 | WP_000497957.1 | FTR1 family protein | - |
| E2348C_RS05660 (E2348_C_1068) | 1114992..1116119 | + | 1128 | WP_000154378.1 | iron uptake system protein EfeO | - |
| E2348C_RS05665 (E2348_C_1069) | 1116125..1117396 | + | 1272 | WP_001199145.1 | deferrochelatase/peroxidase EfeB | - |
| E2348C_RS05670 (E2348_C_1070) | 1118023..1118811 | + | 789 | WP_000533536.1 | phosphate starvation-inducible protein PhoH | - |
| E2348C_RS05675 (E2348_C_1071) | 1119374..1120060 | + | 687 | WP_000009232.1 | DUF2726 domain-containing protein | - |
| E2348C_RS05680 (E2348_C_1072) | 1120326..1121543 | + | 1218 | WP_000279877.1 | Prophage integrase IntA ; Integrase | Integrase |
| E2348C_RS05685 (E2348_C_1073) | 1121713..1123242 | - | 1530 | WP_012578871.1 | DUF3987 domain-containing protein | - |
| E2348C_RS05690 | 1123214..1123501 | - | 288 | WP_000070929.1 | AlpA family transcriptional regulator | - |
| E2348C_RS05695 (E2348_C_1074) | 1123602..1125437 | + | 1836 | WP_001258871.1 | hypothetical protein | - |
| E2348C_RS05700 (E2348_C_1075) | 1126812..1127375 | + | 564 | WP_000282108.1 | inovirus-type Gp2 protein | - |
| E2348C_RS26555 | 1127515..1127844 | + | 330 | Protein_1090 | DEAD/DEAH box helicase | - |
| E2348C_RS26560 | 1127898..1128390 | - | 493 | Protein_1091 | IS3 family transposase ISSfl10 | Transposase |
| E2348C_RS05715 (E2348_C_1077) | 1128543..1128782 | + | 240 | WP_001260398.1 | hypothetical protein | - |
| E2348C_RS28735 (E2348C_1079) | 1129032..1137996 | - | 8965 | Protein_1093 | Toxin B | VF |
| E2348C_RS05730 (E2348_C_1080) | 1138203..1138709 | - | 507 | WP_000609738.1 | hypothetical protein | VF |
| E2348C_RS05735 (E2348_C_1081) | 1138758..1139746 | - | 989 | Protein_1095 | hypothetical protein | VF |
| E2348C_RS26575 | 1139987..1140136 | - | 150 | Protein_1096 | IS1 family transposase | - |
| E2348C_RS26580 (E2348C_1082) | 1140353..1141930 | - | 1578 | Protein_1097 | ShET2/EspL2 family type III secretion system effector toxin | - |
| E2348C_RS05760 | 1142234..1142455 | + | 222 | WP_000022709.1 | hypothetical protein | - |
| E2348C_RS05765 (E2348_C_1083) | 1142729..1143606 | - | 878 | Protein_1099 | IS4 family transposase | - |
| E2348C_RS05775 | 1143727..1143932 | + | 206 | Protein_1100 | methyltransferase | - |
| E2348C_RS05780 | 1144049..1144237 | - | 189 | Protein_1101 | IS66 family transposase IS682 | Transposase |
| E2348C_RS05785 (E2348_C_1084) | 1144298..1144837 | + | 540 | Protein_1102 | IS110 family transposase ISEc45 | Transposase |
| E2348C_RS05795 (E2348_C_1086) | 1144892..1146105 | + | 1214 | WP_170315999.1 | IS3 family transposase IS629 | Transposase |
| E2348C_RS05800 | 1146148..1146339 | - | 192 | Protein_1104 | IS66 family transposase ISEc23 | Transposase |
| E2348C_RS05805 (E2348_C_1087) | 1146410..1147421 | - | 1012 | Protein_1105 | transposase | - |
| E2348C_RS05810 (E2348_C_1088) | 1147639..1148661 | + | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| E2348C_RS05815 (E2348_C_1089) | 1148658..1149440 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| E2348C_RS05825 | 1149898..1150098 | - | 201 | Protein_1108 | integrase core domain-containing protein | - |
| E2348C_RS05830 (E2348_C_1090) | 1150268..1150984 | - | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| E2348C_RS05835 (E2348_C_1091) | 1150984..1154079 | - | 3096 | WP_000108733.1 | HsdR family type I site-specific deoxyribonuclease | - |
| E2348C_RS05840 (E2348_C_1092) | 1154098..1155165 | - | 1068 | WP_000634203.1 | macro domain-containing protein | Antitoxin Detail |
| E2348C_RS05845 (E2348_C_1093) | 1155162..1155818 | - | 657 | WP_000312835.1 | DUF4433 domain-containing protein | Toxin Detail |
| E2348C_RS05850 (E2348_C_1094) | 1155830..1157179 | - | 1350 | WP_001386438.1 | restriction endonuclease subunit S | - |
| E2348C_RS05855 (E2348_C_1095) | 1157191..1159629 | - | 2439 | WP_000985463.1 | type I restriction-modification system subunit M | - |
| E2348C_RS05860 (E2348_C_1096) | 1159669..1159908 | - | 240 | WP_000343040.1 | hypothetical protein | - |
| E2348C_RS05865 (E2348_C_1098) | 1161060..1161428 | + | 369 | WP_000013660.1 | hypothetical protein | - |
| E2348C_RS05870 (E2348_C_1099) | 1161609..1161884 | + | 276 | WP_000762451.1 | hypothetical protein | - |
| E2348C_RS05885 (E2348_C_1103) | 1164254..1165867 | + | 1614 | WP_000080159.1 | IS66 family transposase ISEc47 | Transposase |
| E2348C_RS26070 (E2348C_1104) | 1165997..1167003 | + | 1007 | Protein_1120 | IS30 family transposase IS30D | Transposase |
| E2348C_RS28855 (E2348C_IS_28) | 1168317..1168460 | + | 144 | Protein_1122 | IS3 family transposase IS911 | Transposase |
| E2348C_RS05905 (E2348_C_1107) | 1168473..1168730 | - | 258 | Protein_1123 | IS3 family transposase IS911 | Transposase |
| E2348C_RS05910 (E2348_C_1108) | 1168973..1169844 | + | 872 | Protein_1124 | GTPase family protein | - |
| E2348C_RS05915 (E2348_C_1109) | 1170076..1171384 | + | 1309 | Protein_1125 | AIDA repeat-containing protein | - |
| E2348C_RS05920 (E2348_C_1110) | 1171483..1173867 | + | 2385 | WP_000544657.1 | dynamin family protein | - |
| E2348C_RS05925 (E2348_C_1111) | 1173864..1174769 | + | 906 | WP_000203541.1 | chemotaxis protein | - |
| E2348C_RS05930 (E2348_C_1112) | 1174766..1175836 | + | 1071 | WP_000102671.1 | patatin-like phospholipase family protein | - |
| E2348C_RS05940 (E2348_C_1114) | 1176176..1176994 | + | 819 | WP_001234664.1 | DUF945 domain-containing protein | - |
| E2348C_RS05945 (E2348_C_1115) | 1177085..1177570 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| E2348C_RS05950 (E2348_C_1116) | 1177586..1178062 | + | 477 | WP_001186738.1 | RadC family protein | - |
| E2348C_RS05955 (E2348_C_1117) | 1178125..1178346 | + | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| E2348C_RS05965 (E2348_C_1118) | 1178509..1178883 | + | 375 | WP_001280955.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| E2348C_RS05970 (E2348_C_1119) | 1178930..1179304 | + | 375 | WP_000854914.1 | TA system toxin CbtA family protein | - |
| E2348C_RS05975 (E2348_C_1120) | 1179301..1179792 | + | 492 | WP_000976857.1 | hypothetical protein | - |
| E2348C_RS05980 (E2348_C_1121) | 1179804..1180001 | + | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| E2348C_RS05985 (E2348_C_1122) | 1180086..1180928 | + | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| E2348C_RS05995 (E2348_C_1123) | 1181398..1182336 | + | 939 | WP_000351277.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain E2348/69 | Prophage | TA169242 | NZ_CP059840 | 2984845..3061088 | 0.006 | |
| Escherichia coli O127:H6 isolate EPEC E2348/69 variety | Prophage | TA293491 | NZ_LT827011 | 1101582..1177570 | 0.006 | |
| Escherichia coli O127:H6 isolate EPEC E2348/69 variety | Prophage | TA293491 | NZ_LT827011 | 1117747..1177570 | 0 |