MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60555 bp
Accession: NC_011416 Location: 1..60555 Organism: Escherichia coli SE11 Replicon: plasmid pSE11-3
Accession: NC_011416 Location: 1..60555 Organism: Escherichia coli SE11 Replicon: plasmid pSE11-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSE_RS25590 () | 1..1044 | + | 1044 | WP_000279209.1 | anaerobic sulfite reductase subunit AsrA | - |
| ECSE_RS25595 () | 1048..1866 | + | 819 | WP_012565200.1 | anaerobic sulfite reductase subunit AsrB | - |
| ECSE_RS25600 () | 1877..2890 | + | 1014 | WP_000109848.1 | sulfite reductase subunit C | - |
| ECSE_RS28045 () | 3084..3260 | - | 177 | Protein_3 | transposase domain-containing protein | - |
| ECSE_RS28050 () | 3328..3780 | - | 453 | WP_072135268.1 | reverse transcriptase | - |
| ECSE_RS25610 () | 3761..4011 | - | 251 | Protein_5 | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase | VF |
| ECSE_RS25615 () | 4134..4382 | - | 249 | WP_148195601.1 | faeA-like family protein | - |
| ECSE_RS28055 () | 4652..5869 | + | 1218 | Protein_7 | IS3 family transposase IS2 | Transposase |
| ECSE_RS25635 () | 6057..7226 | - | 1170 | Protein_8 | hypothetical protein | - |
| ECSE_RS28075 () | 7758..8014 | + | 257 | Protein_9 | type II toxin-antitoxin system ParD family antitoxin | - |
| ECSE_RS25640 () | 8130..8291 | + | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ECSE_RS28690 () | 8358..8540 | + | 183 | WP_048657295.1 | hypothetical protein | - |
| ECSE_RS25650 () | 8661..9401 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| ECSE_RS25655 () | 9686..10663 | - | 978 | WP_012565206.1 | RepB family plasmid replication initiator protein | - |
| ECSE_RS25670 () | 11424..11960 | + | 537 | Protein_14 | hypothetical protein | - |
| ECSE_RS28090 () | 12046..12692 | + | 647 | Protein_15 | IS66 family transposase ISCro1 | Transposase |
| ECSE_RS25685 () | 12692..13039 | + | 348 | WP_000624625.1 | IS66 family transposase ISCro1 | Transposase |
| ECSE_RS25690 () | 13059..14620 | + | 1562 | Protein_17 | IS66 family transposase ISCro1 | Transposase |
| ECSE_RS28100 () | 15972..16346 | + | 375 | WP_012565211.1 | hypothetical protein | - |
| ECSE_RS25710 () | 16524..17201 | + | 678 | WP_012565212.1 | hypothetical protein | - |
| ECSE_RS25715 () | 17747..18157 | + | 411 | WP_000774096.1 | zinc resistance sensor/chaperone ZraP | - |
| ECSE_RS28110 () | 18561..18761 | - | 201 | Protein_21 | transposase | - |
| ECSE_RS25730 () | 18983..20443 | - | 1461 | WP_000797448.1 | DASS family sodium-coupled anion symporter | - |
| ECSE_RS25735 () | 20759..23035 | + | 2277 | WP_000028211.1 | thiosulfate reductase PhsA | - |
| ECSE_RS25740 () | 23050..23628 | + | 579 | WP_000680394.1 | thiosulfate reductase electron transport protein PhsB | - |
| ECSE_RS25745 () | 23625..24389 | + | 765 | WP_001092565.1 | thiosulfate reductase cytochrome B subunit | - |
| ECSE_RS25750 () | 24850..26046 | + | 1197 | WP_012565215.1 | IS110 family transposase ISEc20 | Transposase |
| ECSE_RS25755 () | 26182..26547 | - | 366 | WP_000124140.1 | hypothetical protein | - |
| ECSE_RS25760 () | 26702..26893 | - | 192 | WP_032174713.1 | P fimbrial regulatory protein KS71A | VF |
| ECSE_RS25765 () | 27363..27686 | + | 324 | WP_000431569.1 | Major pilu subunit operon regulatory protein PapB | VF |
| ECSE_RS25770 () | 27686..28231 | + | 546 | WP_000708866.1 | hypothetical protein | VF |
| ECSE_RS25775 () | 28243..30681 | + | 2439 | WP_000761061.1 | Outer membrane usher protein YraJ | VF |
| ECSE_RS25780 () | 30674..31450 | + | 777 | WP_000044488.1 | Chaperone protein FaeE | VF |
| ECSE_RS25785 () | 31485..31976 | + | 492 | WP_000753462.1 | hypothetical protein | VF |
| ECSE_RS25790 () | 32215..33054 | + | 840 | WP_000751753.1 | K88 fimbrial protein AD | VF |
| ECSE_RS25795 () | 33225..34022 | + | 798 | WP_000704730.1 | hypothetical protein | VF |
| ECSE_RS25800 () | 34052..34816 | + | 765 | WP_000758128.1 | hypothetical protein | VF |
| ECSE_RS25805 () | 34833..35606 | + | 774 | WP_000932014.1 | hypothetical protein | VF |
| ECSE_RS25810 () | 35756..36034 | - | 279 | Protein_38 | ISKra4 family transposase | - |
| ECSE_RS25825 () | 37351..37851 | + | 501 | Protein_40 | transposase | - |
| ECSE_RS28125 () | 37902..38864 | + | 963 | Protein_41 | IS66 family transposase ISEc43 | Transposase |
| ECSE_RS29040 () | 38888..39257 | + | 370 | Protein_42 | resolvase | - |
| ECSE_RS25845 () | 39533..41011 | - | 1479 | WP_000119409.1 | anion permease | - |
| ECSE_RS25850 () | 41059..42711 | - | 1653 | WP_012565217.1 | NAD-dependent malic enzyme | - |
| ECSE_RS25855 () | 42794..43891 | - | 1098 | WP_012565218.1 | choloylglycine hydrolase family protein | - |
| ECSE_RS28135 () | 43934..44152 | - | 219 | WP_001292878.1 | hypothetical protein | - |
| ECSE_RS25860 () | 44301..45110 | + | 810 | Protein_47 | Diacetyl reductase [(S)-acetoin forming] | VF |
| ECSE_RS28985 () | 45482..45643 | - | 162 | WP_001384894.1 | hypothetical protein | - |
| ECSE_RS28140 () | 45716..47191 | + | 1476 | Protein_49 | IS66 family transposase IS679 | Transposase |
| ECSE_RS25880 () | 47353..47769 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ECSE_RS25885 () | 47766..47996 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ECSE_RS25890 () | 48181..48623 | - | 443 | Protein_52 | IS3 family transposase ISEc25 | Transposase |
| ECSE_RS25905 () | 49207..50091 | - | 885 | WP_000942222.1 | helix-turn-helix domain-containing protein | - |
| ECSE_RS28155 () | 50376..51206 | + | 831 | WP_012565223.1 | Transposon Tn10 TetD protein | VF |
| ECSE_RS25915 () | 51251..52000 | - | 750 | WP_106141716.1 | EAL domain-containing protein | - |
| ECSE_RS25920 () | 52333..53010 | - | 678 | WP_024210478.1 | hypothetical protein | - |
| ECSE_RS25925 () | 53582..56194 | - | 2613 | WP_000695297.1 | Outer membrane usher protein FimD | VF |
| ECSE_RS25930 () | 56198..56989 | - | 792 | WP_106141718.1 | molecular chaperone | - |
| ECSE_RS25935 () | 56934..57635 | - | 702 | WP_000231973.1 | molecular chaperone | - |
| ECSE_RS25940 () | 57638..58201 | - | 564 | WP_001144751.1 | type 1 fimbrial protein | - |
| ECSE_RS25945 () | 58231..58641 | - | 411 | WP_041031414.1 | hypothetical protein | VF |
| ECSE_RS25950 () | 58802..59512 | - | 711 | WP_001021260.1 | Chaperone protein FocC | VF |
| ECSE_RS25955 () | 59579..60118 | - | 540 | WP_024210479.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|