MGE detailed information
MGE type: Prophage MGE length: 50631 bp
Accession: NC_011415 Location: 1475428..1526058 Organism: Escherichia coli SE11 Replicon: chromosome
Accession: NC_011415 Location: 1475428..1526058 Organism: Escherichia coli SE11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSE_RS07250 () | 1471478..1472461 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ECSE_RS07260 () | 1472939..1474312 | + | 1374 | WP_000123738.1 | ATP-dependent RNA helicase DbpA | - |
| ECSE_RS07265 () | 1474441..1475376 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ECSE_RS26695 () | 1475428..1476663 | - | 1236 | WP_000040852.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ECSE_RS07275 () | 1476665..1476880 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ECSE_RS07280 () | 1476959..1477168 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1476984..1477162 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1476984..1477162 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1476984..1477162 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1476984..1477162 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ECSE_RS07285 () | 1477161..1477355 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ECSE_RS07290 () | 1477412..1478221 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| ECSE_RS07295 () | 1478214..1480814 | - | 2601 | WP_000105146.1 | exodeoxyribonuclease VIII | - |
| ECSE_RS07300 () | 1480916..1481191 | - | 276 | WP_012565066.1 | protein RacC | - |
| ECSE_RS07305 () | 1481266..1481436 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| ECSE_RS07310 () | 1481436..1481657 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| ECSE_RS07315 () | 1482100..1482588 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| ECSE_RS26045 () | 1482585..1482740 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| ECSE_RS26705 () | 1482751..1482930 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| ECSE_RS26050 () | 1483173..1483592 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| ECSE_RS07325 () | 1483672..1483926 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| ECSE_RS07330 () | 1483923..1484345 | + | 423 | WP_000693804.1 | hypothetical protein | - |
| ECSE_RS07335 () | 1484358..1485215 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| ECSE_RS07340 () | 1485222..1485968 | + | 747 | WP_000788971.1 | ATP-binding protein | - |
| ECSE_RS07345 () | 1485991..1486752 | + | 762 | WP_000450658.1 | DUF1627 domain-containing protein | - |
| ECSE_RS07350 () | 1486768..1487145 | + | 378 | WP_001141106.1 | DUF977 family protein | - |
| ECSE_RS07355 () | 1487436..1489118 | + | 1683 | WP_001118594.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| ECSE_RS07360 () | 1489646..1490695 | + | 1050 | WP_000505828.1 | tetratricopeptide repeat protein | - |
| ECSE_RS07385 () | 1492989..1493588 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| ECSE_RS07390 () | 1493588..1493878 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| ECSE_RS07395 () | 1493875..1494417 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| ECSE_RS07400 () | 1495462..1495890 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| ECSE_RS07405 () | 1496062..1496436 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| ECSE_RS07410 () | 1496688..1496903 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| ECSE_RS07415 () | 1496903..1497400 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| ECSE_RS26730 () | 1497617..1497802 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| ECSE_RS07425 () | 1497999..1499456 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| ECSE_RS07430 () | 1499594..1500385 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| ECSE_RS07435 () | 1500378..1501310 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| ECSE_RS07440 () | 1501246..1501497 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| ECSE_RS07445 () | 1501501..1502595 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| ECSE_RS07450 () | 1502576..1503877 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| ECSE_RS07455 () | 1503880..1505286 | + | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| ECSE_RS07460 () | 1505270..1506382 | + | 1113 | WP_001351715.1 | hypothetical protein | - |
| ECSE_RS07465 () | 1506487..1507251 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| ECSE_RS07470 () | 1507350..1508489 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| ECSE_RS28900 () | 1508532..1508708 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| ECSE_RS07475 () | 1508712..1509107 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| ECSE_RS07480 () | 1509107..1509490 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| ECSE_RS07485 () | 1509491..1509871 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| ECSE_RS07490 () | 1509868..1510260 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| ECSE_RS07495 () | 1510287..1511249 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| ECSE_RS07500 () | 1511400..1511759 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| ECSE_RS07510 () | 1512233..1515466 | + | 3234 | WP_000840618.1 | phage tail tape measure protein | - |
| ECSE_RS07515 () | 1515459..1515797 | + | 339 | WP_000024051.1 | phage tail protein | - |
| ECSE_RS07520 () | 1515797..1516495 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| ECSE_RS07525 () | 1516501..1517244 | + | 744 | WP_012565076.1 | C40 family peptidase | - |
| ECSE_RS07530 () | 1517181..1517783 | + | 603 | WP_000090943.1 | tail assembly protein | - |
| ECSE_RS07535 () | 1517844..1521341 | + | 3498 | WP_000515709.1 | host specificity protein J | - |
| ECSE_RS07540 () | 1521412..1522011 | + | 600 | WP_001233090.1 | hypothetical protein | VF |
| ECSE_RS26740 () | 1522076..1525474 | + | 3399 | WP_012565077.1 | prophage tail fiber N-terminal domain-containing protein | - |
| ECSE_RS07560 () | 1525474..1526058 | + | 585 | WP_000885615.1 | tail fiber assembly protein | - |
| ECSE_RS07565 () | 1526132..1527463 | - | 1332 | WP_000586336.1 | sensor domain-containing diguanylate cyclase | - |
| ECSE_RS28780 () | 1527738..1527911 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| ECSE_RS07570 () | 1528176..1528610 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| ECSE_RS07575 () | 1528751..1529884 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|