MGE detailed information
MGE type: Genomic_island MGE length: 16612 bp
Accession: NC_011060 Location: 1829670..1846281 Organism: Pelodictyon phaeoclathratiforme BU-1 Replicon: chromosome
Accession: NC_011060 Location: 1829670..1846281 Organism: Pelodictyon phaeoclathratiforme BU-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PPHA_RS08485 () | 1827057..1827290 | + | 234 | WP_041526794.1 | hypothetical protein | - |
| PPHA_RS08490 () | 1827457..1827669 | - | 213 | WP_041526492.1 | hypothetical protein | - |
| PPHA_RS08495 () | 1827650..1827931 | - | 282 | WP_012508438.1 | BrnT family toxin | - |
| PPHA_RS08500 () | 1828073..1828300 | - | 228 | WP_012508439.1 | CopG family transcriptional regulator | - |
| PPHA_RS08505 () | 1828350..1828853 | - | 504 | WP_012508440.1 | GNAT family N-acetyltransferase | - |
| PPHA_RS08510 () | 1828860..1829138 | - | 279 | WP_012508441.1 | DUF1778 domain-containing protein | - |
| PPHA_RS15115 () | 1829228..1830236 | - | 1009 | Protein_1668 | ABC transporter permease | - |
| PPHA_RS08520 () | 1830494..1830883 | - | 390 | WP_012508442.1 | type II toxin-antitoxin system VapC family toxin | - |
| PPHA_RS08525 () | 1830880..1831110 | - | 231 | WP_012508443.1 | hypothetical protein | - |
| PPHA_RS08530 () | 1831362..1831613 | - | 252 | WP_012508444.1 | UPF0175 family protein | - |
| PPHA_RS08535 () | 1832032..1832358 | + | 327 | WP_012508445.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PPHA_RS08540 () | 1832351..1832677 | + | 327 | WP_012508446.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PPHA_RS08545 () | 1832737..1832918 | - | 182 | Protein_1674 | hypothetical protein | VF |
| PPHA_RS08550 () | 1833005..1834078 | - | 1074 | WP_012508448.1 | metallophosphoesterase family protein | - |
| PPHA_RS08555 () | 1834336..1835010 | + | 675 | WP_041526494.1 | tRNA (guanosine(18)-2'-O)-methyltransferase TrmH | - |
| PPHA_RS08560 () | 1835039..1836088 | - | 1050 | WP_012508450.1 | DUF4332 domain-containing protein | - |
| PPHA_RS08565 () | 1836202..1836744 | - | 543 | WP_012508451.1 | hypothetical protein | - |
| PPHA_RS08570 () | 1836756..1837178 | - | 423 | WP_041526495.1 | rRNA maturation RNase YbeY | - |
| PPHA_RS08575 () | 1837159..1838463 | - | 1305 | WP_012508453.1 | GTPase HflX | - |
| PPHA_RS08580 () | 1838675..1839607 | + | 933 | WP_012508454.1 | phytoene/squalene synthase family protein | - |
| PPHA_RS08585 () | 1839735..1841270 | + | 1536 | WP_012508455.1 | lysine--tRNA ligase | - |
| PPHA_RS08590 () | 1841275..1841697 | + | 423 | WP_012508456.1 | nucleotidyltransferase substrate binding protein | - |
| PPHA_RS08595 () | 1841690..1842010 | + | 321 | WP_012508457.1 | nucleotidyltransferase domain-containing protein | - |
| PPHA_RS08600 () | 1842115..1842345 | + | 231 | WP_012508458.1 | hypothetical protein | - |
| PPHA_RS08605 () | 1842342..1842689 | + | 348 | WP_012508459.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| PPHA_RS15120 () | 1842810..1843133 | - | 324 | WP_083765318.1 | SUMF1/EgtB/PvdO family nonheme iron enzyme | - |
| PPHA_RS08610 () | 1843401..1843598 | + | 198 | WP_150085823.1 | hypothetical protein | - |
| PPHA_RS15955 () | 1843605..1843925 | - | 321 | WP_041526496.1 | hypothetical protein | - |
| PPHA_RS15130 () | 1843957..1844145 | - | 189 | Protein_1690 | hypothetical protein | - |
| PPHA_RS08620 () | 1844130..1844585 | + | 456 | WP_012508462.1 | DUF488 domain-containing protein | - |
| PPHA_RS08625 () | 1844582..1845016 | + | 435 | WP_012508463.1 | DUF488 domain-containing protein | - |
| PPHA_RS08630 () | 1845111..1845330 | - | 220 | Protein_1693 | hypothetical protein | - |
| PPHA_RS08635 () | 1845635..1845862 | + | 228 | WP_041526796.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| PPHA_RS08640 () | 1845859..1846281 | + | 423 | WP_049759918.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| PPHA_RS08645 () | 1846433..1847002 | - | 570 | WP_041526497.1 | hypothetical protein | - |
| PPHA_RS08650 () | 1847028..1848041 | - | 1014 | WP_012508468.1 | NAD-dependent epimerase | - |
| PPHA_RS08655 () | 1848343..1849791 | + | 1449 | WP_012508469.1 | circularly permuted type 2 ATP-grasp protein | - |
| PPHA_RS08660 () | 1849811..1850884 | + | 1074 | WP_012508470.1 | alpha-E domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|