MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 69497 bp
Accession: NC_010725 Location: 3300557..3370053 Organism: Methylobacterium populi BJ001 Replicon: chromosome
Accession: NC_010725 Location: 3300557..3370053 Organism: Methylobacterium populi BJ001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPOP_RS15270 () | 3295654..3296694 | + | 1041 | WP_012454939.1 | toprim domain-containing protein | - |
| MPOP_RS15275 () | 3297007..3297933 | + | 927 | WP_041372035.1 | DUF2493 domain-containing protein | - |
| MPOP_RS28800 () | 3298218..3298385 | + | 168 | WP_012454941.1 | hypothetical protein | - |
| MPOP_RS15280 () | 3298529..3298969 | + | 441 | WP_012454942.1 | hypothetical protein | - |
| MPOP_RS15285 () | 3299541..3299864 | + | 324 | WP_012454943.1 | DUF736 domain-containing protein | - |
| MPOP_RS27580 () | 3300046..3300300 | + | 255 | WP_012454944.1 | XRE family transcriptional regulator | - |
| MPOP_RS15295 () | 3300399..3300665 | + | 267 | WP_012454945.1 | DUF2285 domain-containing protein | - |
| MPOP_RS15300 () | 3301021..3301554 | + | 534 | WP_012454947.1 | DUF2285 domain-containing protein | - |
| MPOP_RS15305 () | 3301694..3301975 | + | 282 | WP_012454948.1 | helix-turn-helix domain-containing protein | - |
| MPOP_RS15310 () | 3301994..3303154 | + | 1161 | WP_012454949.1 | replication initiator protein A | - |
| MPOP_RS15315 () | 3303151..3303804 | + | 654 | WP_012454950.1 | Chromosome-partitioning ATPase Soj | VF |
| MPOP_RS15320 () | 3303801..3304052 | + | 252 | WP_012454951.1 | hypothetical protein | - |
| MPOP_RS15325 () | 3304049..3304570 | + | 522 | WP_012454952.1 | DUF2840 domain-containing protein | - |
| MPOP_RS15330 () | 3304567..3305112 | + | 546 | WP_012454953.1 | S26 family signal peptidase | - |
| MPOP_RS15335 () | 3305180..3305527 | + | 348 | WP_012454954.1 | DUF736 domain-containing protein | - |
| MPOP_RS15340 () | 3305531..3306304 | + | 774 | WP_012454955.1 | lytic transglycosylase domain-containing protein | - |
| MPOP_RS15345 () | 3306549..3308288 | + | 1740 | WP_012454956.1 | VirD2 family relaxase/mobilization nuclease | - |
| MPOP_RS15350 () | 3308313..3310298 | + | 1986 | WP_012454957.1 | Conjugal transfer protein TraG | VF |
| MPOP_RS15355 () | 3310306..3310758 | + | 453 | WP_012454958.1 | ribbon-helix-helix domain-containing protein | - |
| MPOP_RS15360 () | 3310926..3311957 | + | 1032 | WP_012454959.1 | hypothetical protein | VF |
| MPOP_RS15365 () | 3311954..3312286 | + | 333 | WP_012454960.1 | TrbC/VirB2 family protein | - |
| MPOP_RS15370 () | 3312286..3312558 | + | 273 | WP_012454961.1 | VirB3 family type IV secretion system protein | - |
| MPOP_RS15375 () | 3312572..3315010 | + | 2439 | WP_012454962.1 | conjugal transfer protein TrbE | - |
| MPOP_RS15380 () | 3315007..3315768 | + | 762 | WP_012454963.1 | P-type conjugative transfer protein TrbJ | - |
| MPOP_RS15385 () | 3315779..3316150 | + | 372 | WP_012454964.1 | putative entry exclusion protein TrbK-alt | - |
| MPOP_RS15390 () | 3316153..3317505 | + | 1353 | WP_012454965.1 | P-type conjugative transfer protein TrbL | - |
| MPOP_RS15395 () | 3317508..3318191 | + | 684 | WP_012454966.1 | conjugal transfer protein TrbF | - |
| MPOP_RS15400 () | 3318188..3319255 | + | 1068 | WP_012454967.1 | P-type conjugative transfer protein TrbG | - |
| MPOP_RS15405 () | 3319252..3320517 | + | 1266 | WP_012454968.1 | hypothetical protein | VF |
| MPOP_RS15410 () | 3320519..3320758 | + | 240 | WP_012454969.1 | DUF2274 domain-containing protein | - |
| MPOP_RS15415 () | 3320691..3321650 | - | 960 | WP_012454970.1 | LysR family transcriptional regulator | - |
| MPOP_RS15420 () | 3321751..3324519 | - | 2769 | WP_012454971.1 | DEAD/DEAH box helicase family protein | - |
| MPOP_RS15425 () | 3324530..3325027 | - | 498 | WP_012454972.1 | hypothetical protein | - |
| MPOP_RS15430 () | 3325024..3328236 | - | 3213 | WP_012454973.1 | hypothetical protein | - |
| MPOP_RS15435 () | 3328249..3329238 | - | 990 | WP_012454974.1 | hypothetical protein | - |
| MPOP_RS15440 () | 3329238..3331982 | - | 2745 | WP_012454975.1 | DUF499 domain-containing protein | - |
| MPOP_RS15445 () | 3332083..3332931 | - | 849 | WP_012454976.1 | WYL domain-containing protein | - |
| MPOP_RS15455 () | 3333231..3335885 | + | 2655 | WP_012454977.1 | PD-(D/E)XK nuclease family protein | - |
| MPOP_RS15460 () | 3335885..3339283 | + | 3399 | Protein_3096 | UvrD-helicase domain-containing protein | - |
| MPOP_RS15465 () | 3339288..3339944 | + | 657 | WP_208856252.1 | hypothetical protein | - |
| MPOP_RS27590 () | 3339864..3340367 | - | 504 | Protein_3098 | ParB N-terminal domain-containing protein | - |
| MPOP_RS15470 () | 3340397..3341890 | - | 1494 | WP_012454980.1 | hypothetical protein ; Integrase | Integrase |
| MPOP_RS27595 () | 3342084..3342713 | + | 630 | WP_012454981.1 | hypothetical protein | - |
| MPOP_RS15480 () | 3342924..3343184 | + | 261 | WP_012454982.1 | AlpA family phage regulatory protein | - |
| MPOP_RS15485 () | 3343162..3344418 | - | 1257 | WP_012454983.1 | Prophage integrase IntA ; Integrase | Integrase |
| MPOP_RS15490 () | 3344737..3346302 | - | 1566 | WP_012454984.1 | glutamine-hydrolyzing GMP synthase | - |
| MPOP_RS15495 () | 3346472..3346699 | + | 228 | WP_012454985.1 | hypothetical protein | - |
| MPOP_RS15500 () | 3346758..3347786 | - | 1029 | WP_012454986.1 | alpha/beta hydrolase | - |
| MPOP_RS15505 () | 3347921..3349213 | - | 1293 | WP_052300053.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| MPOP_RS28810 () | 3349368..3349544 | + | 177 | WP_012454988.1 | hypothetical protein | - |
| MPOP_RS15510 () | 3349561..3350499 | - | 939 | WP_012454989.1 | 2-dehydropantoate 2-reductase | - |
| MPOP_RS15515 () | 3350707..3351591 | + | 885 | WP_012454990.1 | hypothetical protein | - |
| MPOP_RS15520 () | 3351808..3352653 | + | 846 | WP_012454991.1 | hypothetical protein | - |
| MPOP_RS15525 () | 3353089..3354579 | - | 1491 | WP_012454993.1 | IMP dehydrogenase | - |
| MPOP_RS15530 () | 3354941..3356107 | + | 1167 | WP_012454994.1 | putative lipid II flippase FtsW | - |
| MPOP_RS15535 () | 3356223..3357335 | + | 1113 | WP_012454995.1 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | - |
| MPOP_RS15540 () | 3357453..3358859 | + | 1407 | WP_012454996.1 | UDP-N-acetylmuramate--L-alanine ligase | - |
| MPOP_RS15545 () | 3358863..3359401 | + | 539 | Protein_3115 | endonuclease domain-containing protein | - |
| MPOP_RS15550 () | 3359398..3360327 | + | 930 | WP_012454997.1 | UDP-N-acetylenolpyruvoylglucosamine reductase | VF |
| MPOP_RS15555 () | 3360334..3360528 | + | 195 | WP_012454998.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| MPOP_RS15560 () | 3360528..3360734 | + | 207 | WP_012454999.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| MPOP_RS15565 () | 3360798..3361721 | + | 924 | WP_012455000.1 | D-alanine--D-alanine ligase | - |
| MPOP_RS15570 () | 3361688..3362626 | + | 939 | WP_012455001.1 | cell division protein FtsQ/DivIB | - |
| MPOP_RS15575 () | 3362689..3364011 | + | 1323 | WP_012455002.1 | cell division protein FtsA | - |
| MPOP_RS15580 () | 3364217..3365983 | + | 1767 | WP_012455003.1 | cell division protein FtsZ | - |
| MPOP_RS15585 () | 3366335..3367276 | + | 942 | WP_012455004.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | VF |
| MPOP_RS15590 () | 3367441..3368316 | + | 876 | WP_012455005.1 | outer membrane protein assembly factor BamD | - |
| MPOP_RS15595 () | 3368419..3369855 | - | 1437 | WP_041371488.1 | hypothetical protein | - |
| MPOP_RS15600 () | 3370030..3371727 | + | 1698 | WP_012455007.1 | DNA repair protein RecN | - |
| MPOP_RS15605 () | 3371845..3372069 | - | 225 | WP_041371490.1 | hypothetical protein | - |
| MPOP_RS15610 () | 3372329..3372685 | + | 357 | WP_012455008.1 | hypothetical protein | - |
| MPOP_RS15615 () | 3372772..3373065 | - | 294 | WP_012254285.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|