MGE detailed information
MGE type: IScluster/Tn MGE length: 34897 bp
Accession: NC_010660 Location: 35578..70474 Organism: Shigella boydii CDC 3083-94 Replicon: plasmid pBS512_211
Accession: NC_010660 Location: 35578..70474 Organism: Shigella boydii CDC 3083-94 Replicon: plasmid pBS512_211
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBBS512_RS00545 () | 30674..31873 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| SBBS512_RS00550 () | 31873..32853 | + | 981 | WP_000431558.1 | ParB/RepB/Spo0J family partition protein | - |
| SBBS512_RS00555 () | 33109..33591 | + | 483 | Protein_44 | IS110 family transposase | - |
| SBBS512_RS00560 () | 33621..33800 | - | 180 | Protein_45 | transposase domain-containing protein | - |
| SBBS512_RS00565 () | 33883..35061 | - | 1179 | WP_073692916.1 | group II intron reverse transcriptase/maturase | - |
| SBBS512_RS00570 () | 35587..35766 | - | 180 | Protein_47 | IS66 family transposase IS679 | Transposase |
| SBBS512_RS30775 () | 35803..37012 | - | 1210 | Protein_48 | IS3 family transposase IS629 | Transposase |
| SBBS512_RS00590 () | 37314..37610 | + | 297 | WP_039059935.1 | IS66 family transposase ISSfl3 | Transposase |
| SBBS512_RS00595 () | 37662..38081 | + | 420 | WP_000435428.1 | IS66 family transposase IS682 | Transposase |
| SBBS512_RS00600 () | 38078..38428 | + | 351 | Protein_51 | IS66 family transposase ISEc23 | Transposase |
| SBBS512_RS27620 () | 38459..40051 | + | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| SBBS512_RS00610 () | 40092..40577 | - | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| SBBS512_RS00615 () | 40565..40849 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| SBBS512_RS00625 () | 41522..42672 | + | 1151 | WP_094103878.1 | IS3 family transposase IS911 | Transposase |
| SBBS512_RS00630 () | 42706..44244 | - | 1539 | WP_000119266.1 | IS66 family transposase ISEc22 | Transposase |
| SBBS512_RS00635 () | 44293..44640 | - | 348 | WP_000612625.1 | IS66 family transposase ISKpn24 | Transposase |
| SBBS512_RS00640 () | 44637..45017 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| SBBS512_RS32675 () | 45149..45275 | - | 127 | Protein_59 | IS110 family transposase | - |
| SBBS512_RS32680 () | 45406..45510 | + | 105 | Protein_60 | DUF1472 domain-containing protein | - |
| SBBS512_RS00645 () | 45523..46747 | - | 1225 | Protein_61 | IS3 family transposase IS2 | Transposase |
| SBBS512_RS00660 () | 46835..47104 | - | 270 | Protein_62 | IS3 family transposase ISEc48 | Transposase |
| SBBS512_RS33480 () | 47219..47857 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| SBBS512_RS30790 () | 48016..48513 | - | 498 | Protein_64 | IS1 family transposase | - |
| SBBS512_RS00675 () | 48513..50114 | - | 1602 | WP_004967149.1 | IS66 family transposase ISSfl3 | Transposase |
| SBBS512_RS27305 () | 50134..50316 | - | 183 | WP_089519923.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| SBBS512_RS30795 () | 50619..51828 | + | 1210 | Protein_67 | IS3 family transposase IS629 | Transposase |
| SBBS512_RS30800 () | 51871..52394 | - | 524 | Protein_68 | IS3 family transposase ISSfl11 | Transposase |
| SBBS512_RS33485 () | 52433..52585 | + | 153 | WP_011114782.1 | hypothetical protein | - |
| SBBS512_RS27655 () | 52901..53124 | + | 224 | Protein_70 | hypothetical protein | - |
| SBBS512_RS27660 () | 53233..53501 | + | 269 | Protein_71 | hypothetical protein | VF |
| SBBS512_RS00705 () | 53892..55619 | + | 1728 | WP_012421744.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| SBBS512_RS32690 () | 55649..55804 | - | 156 | Protein_73 | IS256 family transposase ISEc39 | Transposase |
| SBBS512_RS30810 () | 56000..57076 | - | 1077 | Protein_74 | IS3 family transposase IS911 | Transposase |
| SBBS512_RS00725 () | 57150..57568 | - | 419 | Protein_75 | transposase | - |
| SBBS512_RS00730 () | 57567..57989 | + | 423 | WP_073692982.1 | IS21 family transposase IS100 | Transposase |
| SBBS512_RS00735 () | 57931..58719 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| SBBS512_RS30815 () | 59051..59748 | - | 698 | Protein_78 | IS1 family transposase IS1R | Transposase |
| SBBS512_RS32695 () | 59808..59906 | + | 99 | Protein_79 | transposase | - |
| SBBS512_RS00750 () | 60088..60354 | + | 267 | WP_000957717.1 | hypothetical protein | VF |
| SBBS512_RS00755 () | 60935..61246 | + | 312 | WP_000483533.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SBBS512_RS00760 () | 61246..61533 | + | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| SBBS512_RS00770 () | 62071..63258 | - | 1188 | WP_024258531.1 | IS91 family transposase ISEc37 | Transposase |
| SBBS512_RS00775 () | 63258..63623 | - | 366 | WP_000124079.1 | hypothetical protein | - |
| SBBS512_RS00780 () | 63708..64037 | + | 330 | Protein_85 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| SBBS512_RS27685 () | 64067..64150 | + | 84 | Protein_86 | CopG family transcriptional regulator | - |
| SBBS512_RS00785 () | 64150..64245 | + | 96 | Protein_87 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SBBS512_RS00790 () | 64418..65626 | - | 1209 | WP_000198547.1 | IS91 family transposase ISSbo1 | Transposase |
| SBBS512_RS00795 () | 65607..65879 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| SBBS512_RS30840 () | 66046..66165 | - | 120 | Protein_90 | IS66 family transposase ISCro1 | Transposase |
| SBBS512_RS00800 () | 66282..67979 | - | 1698 | WP_011310400.1 | hypothetical protein | VF |
| SBBS512_RS27700 () | 68055..68203 | + | 149 | Protein_92 | IS1 family transposase | - |
| SBBS512_RS00805 () | 68307..69719 | - | 1413 | WP_001026856.1 | hypothetical protein | VF |
| SBBS512_RS32710 () | 70170..70232 | + | 63 | Protein_94 | IS66 family transposase ISCro1 | Transposase |
| SBBS512_RS00810 () | 70253..70474 | - | 222 | Protein_95 | IS66 family transposase ISCro1 | Transposase |
| SBBS512_RS27705 () | 70617..70802 | - | 186 | Protein_96 | HNH endonuclease | - |
| SBBS512_RS32715 () | 70865..71053 | + | 189 | Protein_97 | hypothetical protein | - |
| SBBS512_RS00820 () | 71426..72601 | - | 1176 | WP_001020414.1 | enterotoxin production-related protein TieB | - |
| SBBS512_RS00825 () | 72670..74931 | - | 2262 | WP_001100761.1 | TonB-dependent receptor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|