MGE detailed information
MGE type: Genomic_island MGE length: 9466 bp
Accession: NC_010658 Location: 1915133..1924598 Organism: Shigella boydii CDC 3083-94 Replicon: chromosome
Accession: NC_010658 Location: 1915133..1924598 Organism: Shigella boydii CDC 3083-94 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBBS512_RS12625 () | 1910330..1912963 | + | 2634 | WP_024258614.1 | lipid-binding membrane homeostasis protein YebT | - |
| SBBS512_RS12630 () | 1913043..1914482 | + | 1440 | WP_024258615.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| SBBS512_RS12635 () | 1914600..1914836 | + | 237 | WP_012421427.1 | DUF1480 family protein | - |
| SBBS512_RS12640 () | 1914941..1915132 | + | 192 | WP_000457842.1 | YebW family protein | - |
| SBBS512_RS12645 () | 1915133..1915597 | - | 465 | Protein_1977 | serine/threonine-protein phosphatase | - |
| SBBS512_RS12650 () | 1915664..1915940 | + | 277 | Protein_1978 | IS3 family transposase ISSd1 | Transposase |
| SBBS512_RS12655 () | 1916032..1916412 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| SBBS512_RS12660 () | 1916409..1916756 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| SBBS512_RS12665 () | 1916805..1918343 | + | 1539 | WP_000099170.1 | IS66 family transposase ISEc22 | Transposase |
| SBBS512_RS33730 () | 1918465..1918644 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| SBBS512_RS12675 () | 1918645..1920360 | - | 1716 | WP_077128820.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| SBBS512_RS31680 () | 1920899..1921596 | + | 698 | Protein_1984 | IS1 family transposase IS1X2 | Transposase |
| SBBS512_RS29335 () | 1921879..1922076 | + | 198 | Protein_1985 | metallophosphoesterase | - |
| SBBS512_RS12700 () | 1923394..1923864 | + | 471 | WP_071821702.1 | hypothetical protein ; Integrase | Integrase |
| - () | 1923995..1924229 | + | 235 | - | - | Antitoxin Detail |
| - () | 1923996..1924099 | - | 104 | - | - | Toxin Detail |
| SBBS512_RS12710 () | 1924257..1924598 | - | 342 | WP_000976477.1 | YebY family protein | - |
| SBBS512_RS12715 () | 1924611..1925483 | - | 873 | WP_000879299.1 | copper homeostasis membrane protein CopD | - |
| SBBS512_RS12720 () | 1925487..1925861 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| SBBS512_RS12725 () | 1926000..1926230 | + | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| SBBS512_RS12730 () | 1926332..1926988 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| SBBS512_RS12735 () | 1927012..1927674 | + | 663 | WP_000944259.1 | exodeoxyribonuclease X | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|