MGE detailed information
MGE type: IScluster/Tn MGE length: 22497 bp
Accession: NC_010658 Location: 1002704..1025200 Organism: Shigella boydii CDC 3083-94 Replicon: chromosome
Accession: NC_010658 Location: 1002704..1025200 Organism: Shigella boydii CDC 3083-94 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBBS512_RS07290 () | 998750..999339 | + | 590 | Protein_990 | Ail/Lom family outer membrane beta-barrel protein | - |
| SBBS512_RS28665 () | 999404..1000639 | + | 1236 | WP_000216459.1 | prophage tail fiber N-terminal domain-containing protein | - |
| SBBS512_RS07305 () | 1000725..1001237 | + | 513 | WP_000539253.1 | receptor recognizing protein Gp38 | - |
| SBBS512_RS07310 () | 1001313..1001525 | + | 213 | WP_001114260.1 | DUF4376 domain-containing protein | - |
| SBBS512_RS07315 () | 1001667..1001991 | - | 325 | Protein_994 | YkgJ family cysteine cluster protein | - |
| SBBS512_RS07320 () | 1002127..1002375 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| SBBS512_RS07325 () | 1002472..1002648 | + | 177 | WP_000530012.1 | hypothetical protein | - |
| SBBS512_RS31370 () | 1002704..1003401 | - | 698 | Protein_997 | IS1 family transposase IS1R | Transposase |
| SBBS512_RS07340 () | 1003506..1003853 | - | 348 | Protein_998 | hydrolase | - |
| SBBS512_RS07345 () | 1003880..1005076 | - | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| SBBS512_RS07350 () | 1005268..1005522 | - | 255 | WP_000891627.1 | isochorismatase family protein | - |
| SBBS512_RS07355 () | 1005832..1007604 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| SBBS512_RS07360 () | 1007722..1008174 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| SBBS512_RS07365 () | 1008203..1008943 | + | 741 | WP_000907247.1 | putative transcriptional regulatory protein YebC | VF |
| SBBS512_RS07370 () | 1008978..1009499 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| SBBS512_RS33715 () | 1009655..1009756 | - | 102 | Protein_1005 | IS1 family transposase | - |
| SBBS512_RS07375 () | 1009844..1010263 | + | 420 | WP_000435414.1 | IS66 family transposase IS682 | Transposase |
| SBBS512_RS07380 () | 1010260..1010610 | + | 351 | WP_000623347.1 | IS66 family transposase IS682 | Transposase |
| SBBS512_RS07385 () | 1010641..1012008 | + | 1368 | WP_001072382.1 | IS66 family transposase ISEc43 | Transposase |
| SBBS512_RS07390 () | 1011924..1013462 | - | 1539 | WP_000099170.1 | IS66 family transposase ISEc22 | Transposase |
| SBBS512_RS07395 () | 1013511..1013858 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| SBBS512_RS07400 () | 1013855..1014235 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| SBBS512_RS07405 () | 1014323..1014682 | + | 360 | Protein_1012 | IS66 family transposase IS682 | Transposase |
| SBBS512_RS07410 () | 1014833..1015213 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| SBBS512_RS07415 () | 1015210..1015557 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| SBBS512_RS07420 () | 1015606..1017144 | + | 1539 | WP_000099170.1 | IS66 family transposase ISEc22 | Transposase |
| SBBS512_RS07425 () | 1017424..1018551 | - | 1128 | WP_001063821.1 | IS110 family transposase ISSso6 | Transposase |
| SBBS512_RS07430 () | 1018683..1018982 | - | 300 | Protein_1017 | IS1 family transposase IS1X2 | Transposase |
| SBBS512_RS07445 () | 1020295..1021125 | + | 831 | WP_039059216.1 | DUF945 domain-containing protein | - |
| SBBS512_RS07450 () | 1021207..1021686 | + | 480 | WP_000860059.1 | antirestriction protein | - |
| SBBS512_RS07455 () | 1021702..1022178 | + | 477 | WP_012421636.1 | RadC family protein | - |
| SBBS512_RS07460 () | 1022241..1022462 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| SBBS512_RS07465 () | 1022536..1022904 | + | 369 | WP_001285585.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| SBBS512_RS07470 () | 1022993..1023367 | + | 375 | WP_000854814.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| SBBS512_RS07475 () | 1023364..1023558 | + | 195 | WP_000988600.1 | hypothetical protein | - |
| SBBS512_RS32955 () | 1023571..1023684 | + | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| SBBS512_RS07485 () | 1024073..1025200 | + | 1128 | WP_001063811.1 | IS110 family transposase ISSso6 | Transposase |
| SBBS512_RS07490 () | 1025467..1025706 | - | 240 | Protein_1028 | nickel/cobalt efflux protein RcnA | - |
| SBBS512_RS07495 () | 1025828..1026100 | + | 273 | WP_000019944.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| SBBS512_RS07500 () | 1026323..1027111 | + | 789 | WP_001195636.1 | hydroxyethylthiazole kinase | - |
| SBBS512_RS07505 () | 1027108..1027908 | + | 801 | WP_000822274.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SBBS512_RS07510 () | 1027973..1028791 | + | 819 | WP_005031483.1 | glycoside hydrolase family 25 protein | - |
| SBBS512_RS07515 () | 1028843..1029589 | + | 747 | WP_000434038.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|