MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 63168 bp
Accession: NC_010582 Location: 1259712..1322879 Organism: Streptococcus pneumoniae CGSP14 Replicon: chromosome
Accession: NC_010582 Location: 1259712..1322879 Organism: Streptococcus pneumoniae CGSP14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPCG_RS06580 () | 1255821..1259399 | - | 3579 | WP_000058659.1 | ATP-binding protein | - |
| SPCG_RS06585 () | 1259712..1260899 | - | 1188 | WP_000237019.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SPCG_RS06590 () | 1260871..1261140 | - | 270 | WP_000450956.1 | DUF3173 family protein | - |
| SPCG_RS06595 () | 1261413..1261637 | - | 225 | WP_000919629.1 | helix-turn-helix domain-containing protein | - |
| SPCG_RS06600 () | 1261741..1263570 | - | 1830 | WP_000237138.1 | relaxase/mobilization nuclease domain-containing protein | - |
| SPCG_RS06605 () | 1263557..1263922 | - | 366 | WP_000401235.1 | plasmid mobilization relaxosome protein MobC | - |
| SPCG_RS06610 () | 1263927..1264283 | - | 357 | WP_000817505.1 | hypothetical protein | - |
| SPCG_RS06615 () | 1264667..1264921 | - | 255 | WP_000456893.1 | hypothetical protein | - |
| SPCG_RS06620 () | 1264987..1268991 | - | 4005 | WP_000209103.1 | UvrD-helicase domain-containing protein | - |
| SPCG_RS06625 () | 1269113..1269499 | - | 387 | WP_000276173.1 | hypothetical protein | - |
| SPCG_RS06630 () | 1269571..1270521 | - | 951 | WP_001814252.1 | WYL domain-containing protein | - |
| SPCG_RS06635 () | 1270606..1271724 | - | 1119 | WP_000116042.1 | hypothetical protein | - |
| SPCG_RS06640 () | 1271986..1273782 | - | 1797 | WP_000016854.1 | NTPase | - |
| SPCG_RS06645 () | 1274199..1274465 | - | 267 | WP_000394413.1 | hypothetical protein | - |
| SPCG_RS06650 () | 1274452..1275156 | - | 705 | WP_001039645.1 | HAD-IB family hydrolase | - |
| SPCG_RS06655 () | 1275209..1275775 | - | 567 | WP_000180153.1 | hypothetical protein | VF |
| SPCG_RS06660 () | 1275868..1276092 | - | 225 | WP_000644601.1 | hypothetical protein | - |
| SPCG_RS06665 () | 1276181..1276798 | - | 618 | WP_000013903.1 | hypothetical protein | - |
| SPCG_RS06670 () | 1277120..1277842 | - | 723 | WP_001814253.1 | hypothetical protein | - |
| SPCG_RS06675 () | 1278171..1279094 | + | 924 | WP_000417606.1 | protein rep | - |
| SPCG_RS06680 () | 1279890..1280609 | - | 720 | Protein_1251 | Chloramphenicol acetyltransferase | ARG |
| SPCG_RS06685 () | 1280780..1281028 | - | 249 | WP_001814254.1 | hypothetical protein | - |
| SPCG_RS06690 () | 1281267..1282055 | - | 789 | WP_000214003.1 | hypothetical protein | - |
| SPCG_RS06695 () | 1282531..1283289 | - | 759 | WP_000512672.1 | zeta toxin family protein | Toxin Detail |
| SPCG_RS06700 () | 1283289..1283765 | - | 477 | WP_000579607.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SPCG_RS06705 () | 1283835..1284107 | - | 273 | WP_000495438.1 | hypothetical protein | - |
| SPCG_RS06710 () | 1284145..1284528 | - | 384 | WP_000159212.1 | hypothetical protein | - |
| SPCG_RS06715 () | 1284525..1284758 | - | 234 | WP_000152419.1 | hypothetical protein | - |
| SPCG_RS06720 () | 1284809..1285894 | - | 1086 | WP_000401903.1 | toprim domain-containing protein | - |
| SPCG_RS06725 () | 1285904..1286545 | - | 642 | WP_000933083.1 | hypothetical protein | - |
| SPCG_RS06730 () | 1286705..1286902 | + | 198 | WP_001841477.1 | hypothetical protein | - |
| SPCG_RS06735 () | 1286916..1287212 | - | 297 | WP_000998886.1 | hypothetical protein | - |
| SPCG_RS06740 () | 1287226..1287510 | - | 285 | WP_000969638.1 | hypothetical protein | - |
| SPCG_RS06745 () | 1287585..1293803 | - | 6219 | WP_000453519.1 | DEAD/DEAH box helicase family protein | - |
| SPCG_RS06750 () | 1293851..1294261 | - | 411 | WP_000387510.1 | thrombospondin type 3 repeat-containing protein | - |
| SPCG_RS06755 () | 1294413..1294979 | - | 567 | WP_000013900.1 | hypothetical protein | - |
| SPCG_RS13395 () | 1294998..1295186 | + | 189 | WP_001860875.1 | hypothetical protein | - |
| SPCG_RS06760 () | 1295217..1298030 | - | 2814 | WP_000653449.1 | CHAP domain-containing protein | - |
| SPCG_RS06765 () | 1298042..1300399 | - | 2358 | WP_029645481.1 | ATPase AAA | - |
| SPCG_RS06770 () | 1300347..1300709 | - | 363 | WP_001097588.1 | PrgI family protein | - |
| SPCG_RS06775 () | 1300763..1301617 | - | 855 | WP_001054261.1 | conjugal transfer protein TrbL | - |
| SPCG_RS06780 () | 1301634..1301876 | - | 243 | WP_000627865.1 | hypothetical protein | - |
| SPCG_RS06785 () | 1301897..1303774 | - | 1878 | WP_001814258.1 | type IV secretory system conjugative DNA transfer family protein | - |
| SPCG_RS06790 () | 1303774..1304262 | - | 489 | WP_000093679.1 | hypothetical protein | - |
| SPCG_RS06795 () | 1304252..1304551 | - | 300 | WP_000869762.1 | hypothetical protein | - |
| SPCG_RS06800 () | 1304834..1305670 | - | 837 | WP_000492399.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| SPCG_RS06805 () | 1305670..1306260 | - | 591 | WP_000227919.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| SPCG_RS06810 () | 1306691..1307005 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| SPCG_RS06815 () | 1307021..1307407 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| SPCG_RS06820 () | 1307436..1308821 | + | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| SPCG_RS12465 () | 1308824..1308976 | + | 153 | WP_000879507.1 | hypothetical protein | - |
| SPCG_RS06825 () | 1308999..1310417 | + | 1419 | WP_001815707.1 | replication initiation factor domain-containing protein | - |
| SPCG_RS06830 () | 1310466..1310549 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| SPCG_RS06835 () | 1310674..1311459 | + | 786 | WP_001038797.1 | rRNA adenine N-6-methyltransferase | ARG |
| SPCG_RS12470 () | 1311399..1311800 | + | 402 | Protein_1285 | aminoglycoside 6-adenylyltransferase | - |
| SPCG_RS06845 () | 1311797..1312339 | + | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
| SPCG_RS06850 () | 1312432..1313226 | + | 795 | WP_001096887.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| SPCG_RS12480 () | 1313502..1314075 | + | 574 | Protein_1288 | HTH domain-containing protein | - |
| SPCG_RS06860 () | 1314404..1314643 | + | 240 | WP_000635249.1 | peptide-binding protein | - |
| SPCG_RS06865 () | 1314692..1314775 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| SPCG_RS06870 () | 1314900..1315637 | + | 738 | WP_001038791.1 | rRNA adenine N-6-methyltransferase | ARG |
| SPCG_RS06875 () | 1315992..1316546 | + | 555 | WP_000576156.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| SPCG_RS06880 () | 1316550..1319468 | + | 2919 | WP_001240984.1 | Tn3 family transposase Tn4430 | Transposase |
| SPCG_RS06885 () | 1319542..1319763 | - | 222 | Protein_1294 | helix-turn-helix transcriptional regulator | - |
| SPCG_RS06890 () | 1320268..1320690 | + | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| SPCG_RS06895 () | 1320687..1320917 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| SPCG_RS06900 () | 1321378..1321581 | + | 204 | WP_000814511.1 | excisionase | - |
| SPCG_RS06905 () | 1321663..1322879 | + | 1217 | Protein_1298 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SPCG_RS06915 () | 1323094..1323681 | - | 588 | WP_000821309.1 | CPBP family intramembrane metalloprotease | - |
| SPCG_RS06920 () | 1323684..1323917 | - | 234 | WP_000840776.1 | hypothetical protein | - |
| SPCG_RS06925 () | 1323930..1324310 | - | 381 | WP_000566524.1 | arsenate reductase family protein | - |
| SPCG_RS06930 () | 1324303..1324752 | - | 450 | WP_000645887.1 | hypothetical protein | - |
| SPCG_RS06935 () | 1324736..1326094 | - | 1359 | WP_001210966.1 | DNA (cytosine-5-)-methyltransferase | - |
| SPCG_RS06940 () | 1326193..1326972 | - | 780 | WP_000822766.1 | replication initiator protein A | - |
| SPCG_RS06945 () | 1326969..1327142 | - | 174 | WP_000159607.1 | hypothetical protein | - |
| SPCG_RS06950 () | 1327344..1327712 | - | 369 | WP_001196961.1 | 50S ribosomal protein L7/L12 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|