MGE detailed information
MGE type: Genomic_island MGE length: 21298 bp
Accession: NC_010513 Location: 1627976..1649273 Organism: Xylella fastidiosa M12 Replicon: chromosome
Accession: NC_010513 Location: 1627976..1649273 Organism: Xylella fastidiosa M12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFASM12_RS12570 () | 1623673..1623828 | - | 156 | WP_012337984.1 | hypothetical protein | - |
| XFASM12_RS12575 () | 1623897..1624061 | - | 165 | WP_193329296.1 | hypothetical protein | - |
| XFASM12_RS07275 () | 1624287..1624755 | - | 469 | Protein_1414 | glycoside hydrolase family 25 protein | - |
| XFASM12_RS07280 () | 1624892..1625074 | + | 183 | WP_027700467.1 | hypothetical protein | - |
| XFASM12_RS07285 () | 1625358..1626284 | - | 927 | WP_004085766.1 | Grx4 family monothiol glutaredoxin | - |
| XFASM12_RS07290 () | 1626350..1627126 | + | 777 | WP_027700469.1 | polysaccharide deacetylase family protein | - |
| XFASM12_RS07300 () | 1627770..1627961 | - | 192 | WP_021358405.1 | hypothetical protein | - |
| XFASM12_RS07305 () | 1628379..1628798 | - | 420 | WP_004085763.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| XFASM12_RS07310 () | 1628798..1629037 | - | 240 | WP_004085761.1 | ribbon-helix-helix domain-containing protein | - |
| XFASM12_RS07315 () | 1629482..1629724 | + | 243 | WP_004085758.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| XFASM12_RS07320 () | 1629717..1630004 | + | 288 | WP_004085905.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFASM12_RS07325 () | 1630092..1630658 | + | 567 | WP_004085755.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| XFASM12_RS07330 () | 1630711..1631907 | - | 1197 | WP_012337730.1 | IS607 family transposase ISCARN56 | Transposase |
| XFASM12_RS07335 () | 1631901..1632527 | - | 627 | WP_038230952.1 | IS607 family transposase ISCfe1 | Transposase |
| XFASM12_RS07340 () | 1632757..1634031 | - | 1275 | WP_012337985.1 | pyridoxal phosphate-dependent aminotransferase | - |
| XFASM12_RS07345 () | 1634436..1636598 | + | 2163 | WP_012337986.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| XFASM12_RS07350 () | 1636595..1638016 | + | 1422 | WP_004085930.1 | Hemolysin secretion protein D, plasmid | VF |
| XFASM12_RS07360 () | 1638543..1639166 | + | 624 | WP_004086041.1 | hypothetical protein | - |
| XFASM12_RS07365 () | 1639163..1639435 | + | 273 | WP_021358268.1 | hypothetical protein | - |
| XFASM12_RS07370 () | 1639438..1640055 | + | 618 | WP_004086046.1 | hypothetical protein | - |
| XFASM12_RS07375 () | 1640052..1641359 | + | 1308 | WP_012337989.1 | hypothetical protein | - |
| XFASM12_RS12355 () | 1642079..1642321 | + | 243 | WP_154128367.1 | hypothetical protein | - |
| XFASM12_RS07385 () | 1642411..1644144 | - | 1734 | WP_004085933.1 | hypothetical protein | - |
| XFASM12_RS07400 () | 1644785..1645735 | - | 951 | WP_012337991.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| XFASM12_RS07405 () | 1645794..1646297 | - | 504 | WP_004085935.1 | Lipoprotein signal peptidase | VF |
| XFASM12_RS07410 () | 1646442..1649273 | - | 2832 | WP_012337992.1 | isoleucine--tRNA ligase | - |
| XFASM12_RS07415 () | 1649270..1650217 | - | 948 | WP_004085938.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| XFASM12_RS07420 () | 1650379..1651989 | - | 1611 | WP_004085940.1 | murein biosynthesis integral membrane protein MurJ | - |
| XFASM12_RS07425 () | 1652089..1652358 | + | 270 | WP_010894866.1 | 30S ribosomal protein S20 | - |
| XFASM12_RS07430 () | 1652475..1653548 | - | 1074 | WP_004085947.1 | GTPase ObgE | - |
| XFASM12_RS07435 () | 1653723..1653980 | - | 258 | WP_004085949.1 | 50S ribosomal protein L27 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|