MGE detailed information
MGE type: Genomic_island MGE length: 36135 bp
Accession: NC_010498 Location: 3270859..3306993 Organism: Escherichia coli SMS-3-5 Replicon: chromosome
Accession: NC_010498 Location: 3270859..3306993 Organism: Escherichia coli SMS-3-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSMS35_RS27115 () | 3266721..3267977 | + | 1257 | Protein_3039 | ISL3 family transposase | - |
| ECSMS35_RS27120 () | 3268027..3268621 | + | 595 | Protein_3040 | integrase core domain-containing protein | - |
| ECSMS35_RS16110 () | 3268818..3270025 | + | 1208 | Protein_3041 | IS256 family transposase | - |
| ECSMS35_RS16115 () | 3270342..3270566 | - | 225 | WP_032145598.1 | sigma-70 family RNA polymerase sigma factor | - |
| ECSMS35_RS16120 () | 3270859..3271968 | - | 1110 | WP_000920000.1 | YadA-like family protein | - |
| ECSMS35_RS27130 () | 3272791..3272904 | - | 114 | WP_032346664.1 | transposase | - |
| ECSMS35_RS27135 () | 3273167..3273352 | - | 186 | Protein_3045 | transketolase family protein | - |
| ECSMS35_RS28405 () | 3273403..3274094 | + | 692 | Protein_3046 | IS1 family transposase | - |
| ECSMS35_RS28410 () | 3274497..3274688 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| ECSMS35_RS28415 () | 3274757..3275005 | + | 249 | WP_001323514.1 | osmoprotectant transport activator ProQ | - |
| ECSMS35_RS16150 () | 3275023..3275571 | - | 549 | WP_001167455.1 | hypothetical protein | - |
| ECSMS35_RS16155 () | 3275772..3276008 | - | 237 | WP_000958153.1 | AlpA family transcriptional regulator | - |
| ECSMS35_RS16160 () | 3276077..3276649 | - | 573 | WP_000991602.1 | hypothetical protein | - |
| ECSMS35_RS16165 () | 3277010..3277741 | - | 732 | WP_001075482.1 | inovirus Gp2 family protein | - |
| ECSMS35_RS16180 () | 3279260..3280390 | - | 1131 | WP_000147745.1 | hypothetical protein | - |
| ECSMS35_RS16185 () | 3280575..3281459 | + | 885 | WP_000010402.1 | 50S ribosome-binding GTPase | - |
| ECSMS35_RS16195 () | 3281662..3282342 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| ECSMS35_RS16200 () | 3282490..3283167 | + | 678 | WP_001097302.1 | hypothetical protein | - |
| ECSMS35_RS16205 () | 3283173..3283406 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| ECSMS35_RS16210 () | 3283496..3284314 | + | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| ECSMS35_RS16215 () | 3284396..3284875 | + | 480 | WP_000860076.1 | antirestriction protein | - |
| ECSMS35_RS16220 () | 3284891..3285367 | + | 477 | WP_001424026.1 | RadC family protein | - |
| ECSMS35_RS16225 () | 3285430..3285651 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| ECSMS35_RS16230 () | 3285731..3286105 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ECSMS35_RS16235 () | 3286152..3286529 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| ECSMS35_RS16240 () | 3286526..3287014 | + | 489 | WP_000761676.1 | hypothetical protein | - |
| ECSMS35_RS16245 () | 3287026..3287223 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| ECSMS35_RS16250 () | 3287308..3288174 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| ECSMS35_RS16255 () | 3288246..3288509 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| ECSMS35_RS16260 () | 3288506..3288832 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ECSMS35_RS16265 () | 3289308..3289478 | + | 171 | Protein_3069 | IS110 family transposase | - |
| ECSMS35_RS16270 () | 3290289..3291272 | + | 984 | WP_001298261.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| ECSMS35_RS16275 () | 3291344..3292492 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| ECSMS35_RS16280 () | 3292516..3294192 | + | 1677 | WP_001332993.1 | Polysialic acid transport protein KpsD | VF |
| ECSMS35_RS16285 () | 3294202..3294942 | + | 741 | WP_012311673.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| ECSMS35_RS16290 () | 3294939..3296972 | + | 2034 | WP_000579532.1 | hypothetical protein | VF |
| ECSMS35_RS16295 () | 3296995..3298200 | + | 1206 | WP_001161844.1 | hypothetical protein | VF |
| ECSMS35_RS16300 () | 3298303..3299254 | - | 952 | Protein_3076 | IS3 family transposase IS2 | Transposase |
| ECSMS35_RS16305 () | 3299428..3299715 | - | 288 | Protein_3077 | IS3 family transposase IS2 | Transposase |
| ECSMS35_RS16310 () | 3299836..3301065 | - | 1230 | WP_000575413.1 | hypothetical protein | VF |
| ECSMS35_RS16315 () | 3301055..3302203 | - | 1149 | WP_000197078.1 | hypothetical protein | VF |
| ECSMS35_RS16320 () | 3302196..3303371 | - | 1176 | WP_000723248.1 | Polysialic acid biosynthesis protein P7 | VF |
| ECSMS35_RS16325 () | 3303368..3304624 | - | 1257 | WP_001259304.1 | N-acylneuraminate cytidylyltransferase | VF |
| ECSMS35_RS16330 () | 3304624..3305664 | - | 1041 | WP_000066002.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| ECSMS35_RS16335 () | 3305661..3306284 | - | 624 | WP_000038461.1 | Putative acetyltransferase EpsM | VF |
| ECSMS35_RS16340 () | 3306334..3306993 | - | 660 | WP_000590258.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| ECSMS35_RS16345 () | 3306990..3307766 | - | 777 | WP_000124301.1 | ABC transporter permease | - |
| ECSMS35_RS16350 () | 3308800..3309999 | - | 1200 | WP_012311830.1 | transposase | - |
| ECSMS35_RS16355 () | 3310058..3310462 | + | 405 | WP_001175008.1 | IS200/IS605 family transposase | - |
| ECSMS35_RS16360 () | 3310702..3311238 | - | 537 | WP_000942768.1 | GspM family type II secretion system protein YghD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|