MGE detailed information
MGE type: Genomic_island MGE length: 38738 bp
Accession: NC_010498 Location: 308165..346902 Organism: Escherichia coli SMS-3-5 Replicon: chromosome
Accession: NC_010498 Location: 308165..346902 Organism: Escherichia coli SMS-3-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSMS35_RS01475 () | 304156..305259 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| ECSMS35_RS01480 () | 305271..306524 | + | 1254 | WP_000893265.1 | glutamate-5-semialdehyde dehydrogenase | - |
| ECSMS35_RS01490 () | 306879..308063 | + | 1185 | WP_000772657.1 | tyrosine-type recombinase/integrase | - |
| ECSMS35_RS28685 () | 308165..309130 | + | 966 | WP_000220589.1 | hypothetical protein | - |
| ECSMS35_RS01500 () | 309610..310773 | - | 1164 | WP_000590615.1 | alpha/beta hydrolase | - |
| ECSMS35_RS01505 () | 310770..311219 | - | 450 | WP_000698455.1 | response regulator | - |
| ECSMS35_RS01510 () | 311216..314491 | - | 3276 | WP_000742272.1 | hypothetical protein | - |
| ECSMS35_RS01520 () | 314956..316133 | + | 1178 | WP_152895938.1 | IS3 family transposase ISEc31 | Transposase |
| ECSMS35_RS01525 () | 316344..316580 | + | 237 | Protein_293 | DUF905 domain-containing protein | - |
| ECSMS35_RS01530 () | 316666..317124 | + | 459 | WP_000211834.1 | antirestriction protein | - |
| ECSMS35_RS01535 () | 317136..317615 | + | 480 | WP_000438147.1 | RadC family protein | - |
| ECSMS35_RS01540 () | 317624..317845 | + | 222 | WP_001220307.1 | DUF987 domain-containing protein | - |
| ECSMS35_RS01545 () | 317865..318182 | + | 318 | WP_000065824.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ECSMS35_RS01550 () | 318203..318571 | + | 369 | WP_000854677.1 | TA system toxin CbtA family protein | Toxin Detail |
| ECSMS35_RS01570 () | 319364..319978 | + | 615 | WP_001019920.1 | YagU family protein | - |
| ECSMS35_RS01575 () | 320227..320556 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| ECSMS35_RS01580 () | 320869..321579 | - | 711 | WP_001361803.1 | putative fimbrial chaperone EcpE | VF |
| ECSMS35_RS01585 () | 321548..323191 | - | 1644 | WP_001265639.1 | Fimbria adhesin EcpD | VF |
| ECSMS35_RS01590 () | 323181..325706 | - | 2526 | WP_001131112.1 | putative outer membrane usher protein EcpC | VF |
| ECSMS35_RS01595 () | 325732..326400 | - | 669 | WP_000716409.1 | putative fimbrial chaperone EcpB | VF |
| ECSMS35_RS01600 () | 326458..327045 | - | 588 | WP_000730983.1 | Common pilus major fimbrillin subunit EcpA | VF |
| ECSMS35_RS01605 () | 327120..327662 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| ECSMS35_RS27975 () | 328486..328676 | + | 191 | Protein_307 | hypothetical protein | - |
| ECSMS35_RS01610 () | 328746..328886 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| ECSMS35_RS01615 () | 328886..329149 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| ECSMS35_RS01620 () | 329514..329615 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| ECSMS35_RS01625 () | 330089..331231 | - | 1143 | WP_000182354.1 | NADH-dependent flavin oxidoreductase | - |
| ECSMS35_RS01630 () | 331476..332396 | - | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| ECSMS35_RS01635 () | 332553..333479 | + | 927 | WP_001328123.1 | HTH-type transcriptional regulator PgrR | VF |
| ECSMS35_RS01640 () | 333679..334572 | + | 894 | WP_012311907.1 | HTH-type transcriptional regulator PgrR | VF |
| ECSMS35_RS01645 () | 334603..335592 | - | 990 | WP_001172285.1 | aldo/keto reductase | - |
| ECSMS35_RS01650 () | 335619..336470 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| ECSMS35_RS01655 () | 337036..341289 | + | 4254 | WP_000092565.1 | hypothetical protein | VF |
| ECSMS35_RS01660 () | 341410..342267 | - | 858 | WP_000621000.1 | Right origin-binding protein | VF |
| ECSMS35_RS01665 () | 342515..343384 | + | 870 | WP_012311960.1 | aldo/keto reductase | - |
| ECSMS35_RS01670 () | 343546..344139 | - | 594 | WP_001361806.1 | reactive chlorine species resistance protein RclC | - |
| ECSMS35_RS01675 () | 344151..344387 | - | 237 | WP_000474078.1 | DUF1471 domain-containing protein | - |
| ECSMS35_RS01680 () | 344496..345821 | - | 1326 | WP_001046324.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| ECSMS35_RS01685 () | 346048..346902 | + | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| ECSMS35_RS01690 () | 347428..348147 | + | 720 | WP_001102127.1 | (Fe-S)-binding protein | - |
| ECSMS35_RS01695 () | 348158..349585 | + | 1428 | WP_000023924.1 | iron-sulfur cluster-binding protein | - |
| ECSMS35_RS01700 () | 349578..350273 | + | 696 | WP_000370410.1 | lactate utilization protein C | - |
| ECSMS35_RS29425 () | 350347..350544 | - | 198 | WP_012311773.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|