MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 186459 bp
Accession: NC_010474 Location: 1..186459 Organism: Synechococcus sp. PCC 7002 Replicon: plasmid pAQ7
Accession: NC_010474 Location: 1..186459 Organism: Synechococcus sp. PCC 7002 Replicon: plasmid pAQ7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYNPCC7002_RS15225 () | 1..588 | + | 588 | WP_012305478.1 | ParA family protein | - |
| SYNPCC7002_RS15230 () | 588..1343 | + | 756 | WP_012305479.1 | ParB/RepB/Spo0J family partition protein | - |
| SYNPCC7002_RS15235 () | 1441..2016 | + | 576 | WP_012305481.1 | nucleoside deaminase | - |
| SYNPCC7002_RS15240 () | 2013..2540 | - | 528 | WP_012305480.1 | 2'-5' RNA ligase family protein | - |
| SYNPCC7002_RS15245 () | 2711..3496 | - | 786 | WP_159449830.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS15250 () | 3706..6204 | - | 2499 | WP_012305483.1 | TonB-dependent receptor | - |
| SYNPCC7002_RS15255 () | 6306..7334 | - | 1029 | WP_012305484.1 | HTH-type transcriptional activator RhaR | VF |
| SYNPCC7002_RS15260 () | 7700..10483 | - | 2784 | WP_012305485.1 | HEAT repeat domain-containing protein | - |
| SYNPCC7002_RS15265 () | 10559..10843 | - | 285 | WP_012305486.1 | DUF427 domain-containing protein | - |
| SYNPCC7002_RS15270 () | 11745..12377 | - | 633 | WP_012305487.1 | hypothetical protein | - |
| SYNPCC7002_RS15275 () | 12511..14241 | - | 1731 | WP_012305488.1 | iron uptake porin | - |
| SYNPCC7002_RS15280 () | 14840..17764 | + | 2925 | WP_012305489.1 | Calcium-transporting ATPase | VF |
| SYNPCC7002_RS15285 () | 17785..18378 | - | 594 | WP_012305490.1 | exopolysaccharide biosynthesis protein | - |
| SYNPCC7002_RS15290 () | 18409..19233 | - | 825 | WP_012305491.1 | Bicarbonate transport ATP-binding protein CmpD | VF |
| SYNPCC7002_RS15295 () | 19256..20653 | - | 1398 | WP_012305492.1 | ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS15300 () | 20667..21506 | - | 840 | WP_012305493.1 | nitrate ABC transporter permease | - |
| SYNPCC7002_RS16840 () | 21820..21960 | - | 141 | WP_012305494.1 | hypothetical protein | - |
| SYNPCC7002_RS15305 () | 22322..23299 | - | 978 | WP_012305495.1 | alpha/beta hydrolase | - |
| SYNPCC7002_RS15310 () | 23404..25845 | - | 2442 | WP_012305496.1 | hypothetical protein | VF |
| SYNPCC7002_RS15315 () | 25893..27110 | - | 1218 | WP_012305497.1 | MFS transporter | - |
| SYNPCC7002_RS15320 () | 27112..28413 | - | 1302 | WP_012305498.1 | L-lysine N6-monooxygenase | VF |
| SYNPCC7002_RS15325 () | 28432..29031 | - | 600 | WP_012305499.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| SYNPCC7002_RS15330 () | 29024..30868 | - | 1845 | WP_012305500.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| SYNPCC7002_RS15335 () | 30865..32373 | - | 1509 | WP_041444119.1 | aspartate aminotransferase family protein | - |
| SYNPCC7002_RS15340 () | 32419..33822 | - | 1404 | WP_012305502.1 | Diaminobutyrate--2-oxoglutarate aminotransferase | VF |
| SYNPCC7002_RS15345 () | 34151..34945 | + | 795 | WP_041444121.1 | hypothetical protein | - |
| SYNPCC7002_RS15350 () | 35127..36020 | - | 894 | WP_012305504.1 | Tn3 family transposase TnpR_ISNpu13 | Transposase |
| SYNPCC7002_RS15355 () | 36130..36615 | + | 486 | WP_012305505.1 | zinc ribbon domain-containing protein | - |
| SYNPCC7002_RS15360 () | 36686..37189 | + | 504 | WP_012305506.1 | dual specificity protein phosphatase family protein | - |
| SYNPCC7002_RS15365 () | 37260..37871 | - | 612 | WP_012305507.1 | hypothetical protein | - |
| SYNPCC7002_RS15370 () | 37991..38581 | - | 591 | WP_012305508.1 | hypothetical protein | - |
| SYNPCC7002_RS15375 () | 38591..39691 | - | 1101 | WP_012305509.1 | IS4 family transposase ISSysp2 | Transposase |
| SYNPCC7002_RS15380 () | 39678..39929 | - | 252 | WP_041444122.1 | hypothetical protein | - |
| SYNPCC7002_RS15385 () | 40099..40464 | - | 366 | WP_012305510.1 | DUF86 domain-containing protein | - |
| SYNPCC7002_RS15390 () | 40448..40774 | - | 327 | WP_012305511.1 | nucleotidyltransferase domain-containing protein | - |
| SYNPCC7002_RS15395 () | 40826..42088 | - | 1263 | WP_012305512.1 | VWA domain-containing protein | - |
| SYNPCC7002_RS15400 () | 42085..42759 | - | 675 | WP_012305513.1 | MerR family transcriptional regulator | - |
| SYNPCC7002_RS15405 () | 43051..43392 | + | 342 | WP_012305514.1 | hypothetical protein | - |
| SYNPCC7002_RS15410 () | 43601..44161 | - | 561 | WP_012305516.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| SYNPCC7002_RS16270 () | 44300..44944 | + | 645 | WP_012305517.1 | plasmid pRiA4b ORF-3 family protein | - |
| SYNPCC7002_RS15420 () | 44949..46349 | + | 1401 | WP_012305518.1 | ISKra4 family transposase ISSysp7 | Transposase |
| SYNPCC7002_RS16845 () | 46499..47485 | + | 987 | Protein_41 | ParM/StbA family protein | - |
| SYNPCC7002_RS15435 () | 47506..47880 | + | 375 | WP_012305520.1 | hypothetical protein | - |
| SYNPCC7002_RS15440 () | 47892..48365 | + | 474 | WP_012305521.1 | hypothetical protein | - |
| SYNPCC7002_RS15445 () | 48966..49475 | - | 510 | WP_012305522.1 | hypothetical protein | - |
| SYNPCC7002_RS17025 () | 49950..50120 | - | 171 | WP_012305524.1 | hypothetical protein | - |
| SYNPCC7002_RS15450 () | 50213..50458 | - | 246 | WP_012305525.1 | hypothetical protein | - |
| SYNPCC7002_RS15455 () | 50455..51051 | - | 597 | WP_012305526.1 | hypothetical protein | VF |
| SYNPCC7002_RS16850 () | 51282..51647 | + | 366 | WP_041444073.1 | hypothetical protein | - |
| SYNPCC7002_RS15465 () | 51717..52601 | + | 885 | WP_049761764.1 | Tyrosine recombinase XerC | VF |
| SYNPCC7002_RS15470 () | 52785..53093 | + | 309 | WP_012305529.1 | hypothetical protein | - |
| SYNPCC7002_RS15475 () | 53110..53328 | + | 219 | WP_041444072.1 | DUF2281 domain-containing protein | - |
| SYNPCC7002_RS15480 () | 53329..53724 | + | 396 | WP_012305530.1 | type II toxin-antitoxin system VapC family toxin | - |
| SYNPCC7002_RS15485 () | 54201..55307 | - | 1107 | WP_012305531.1 | sensor histidine kinase KdpD | - |
| SYNPCC7002_RS15490 () | 55369..55941 | - | 573 | WP_012305532.1 | K(+)-transporting ATPase subunit C | - |
| SYNPCC7002_RS16855 () | 55985..56128 | - | 144 | WP_156785490.1 | hypothetical protein | - |
| SYNPCC7002_RS15495 () | 56131..56382 | - | 252 | WP_012305534.1 | potassium-transporting ATPase subunit F | - |
| SYNPCC7002_RS15500 () | 56430..57200 | - | 771 | WP_143589393.1 | hypothetical protein | VF |
| SYNPCC7002_RS15505 () | 57241..59328 | - | 2088 | WP_012305536.1 | potassium-transporting ATPase subunit KdpB | - |
| SYNPCC7002_RS15510 () | 59393..61099 | - | 1707 | WP_012305537.1 | potassium-transporting ATPase subunit A | - |
| SYNPCC7002_RS15515 () | 61482..62570 | + | 1089 | WP_049761820.1 | HAMP domain-containing histidine kinase | - |
| SYNPCC7002_RS15520 () | 62567..63262 | + | 696 | WP_012305539.1 | response regulator transcription factor | - |
| SYNPCC7002_RS15525 () | 63339..64175 | - | 837 | WP_012305540.1 | ABC transporter permease | - |
| SYNPCC7002_RS15530 () | 64132..64935 | - | 804 | WP_012305541.1 | Linearmycin resistance ATP-binding protein LnrL | VF |
| SYNPCC7002_RS15535 () | 65060..65506 | - | 447 | WP_012305542.1 | MarR family transcriptional regulator | - |
| SYNPCC7002_RS15540 () | 65804..67423 | - | 1620 | WP_012305543.1 | NCS2 family permease | - |
| SYNPCC7002_RS16275 () | 69514..73563 | + | 4050 | WP_203414988.1 | ExeM/NucH family extracellular endonuclease | - |
| SYNPCC7002_RS15550 () | 74140..74874 | + | 735 | WP_012305545.1 | peptidylprolyl isomerase | - |
| SYNPCC7002_RS15555 () | 74943..77972 | + | 3030 | WP_041444126.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| SYNPCC7002_RS15560 () | 78042..79721 | + | 1680 | WP_041444127.1 | hypothetical protein | VF |
| SYNPCC7002_RS16860 () | 79898..80458 | - | 561 | WP_143589392.1 | IS4 family transposase ISSysp2 | Transposase |
| SYNPCC7002_RS16865 () | 80873..81091 | - | 219 | WP_049761794.1 | IS4 family transposase ISSysp2 | Transposase |
| SYNPCC7002_RS15575 () | 81350..82906 | + | 1557 | WP_159449831.1 | alpha/beta hydrolase | - |
| SYNPCC7002_RS15580 () | 82903..84519 | - | 1617 | WP_012305550.1 | cation:proton antiporter | - |
| SYNPCC7002_RS15585 () | 85060..86340 | + | 1281 | WP_012305552.1 | FAD-dependent oxidoreductase | - |
| SYNPCC7002_RS15590 () | 86891..88219 | + | 1329 | WP_012305554.1 | IS4 family transposase ISSysp3 | Transposase |
| SYNPCC7002_RS15595 () | 88192..88683 | - | 492 | WP_012305553.1 | cytochrome b6-f complex iron-sulfur subunit | - |
| SYNPCC7002_RS15600 () | 88738..88935 | - | 198 | WP_012305555.1 | DUF2892 domain-containing protein | - |
| SYNPCC7002_RS15605 () | 89450..90472 | + | 1023 | WP_012305556.1 | Hemin transport system permease protein HmuU | VF |
| SYNPCC7002_RS15610 () | 90469..91302 | + | 834 | WP_012305557.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| SYNPCC7002_RS15615 () | 91406..94054 | + | 2649 | WP_041444130.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| SYNPCC7002_RS15620 () | 94180..94545 | + | 366 | WP_041444158.1 | VOC family protein | - |
| SYNPCC7002_RS15625 () | 94610..95497 | + | 888 | WP_143589451.1 | ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS15630 () | 95562..96101 | + | 540 | WP_012305561.1 | hypothetical protein | - |
| SYNPCC7002_RS15635 () | 96164..96508 | - | 345 | WP_041444131.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| SYNPCC7002_RS15640 () | 96502..96744 | - | 243 | WP_030008115.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SYNPCC7002_RS15645 () | 96849..97664 | - | 816 | WP_012305563.1 | Petrobactin import ATP-binding protein FpuD | VF |
| SYNPCC7002_RS15650 () | 97668..98705 | - | 1038 | WP_041444133.1 | putative siderophore transport system permease protein YfhA | VF |
| SYNPCC7002_RS15655 () | 98702..99676 | - | 975 | WP_012305565.1 | putative siderophore transport system permease protein YfiZ | VF |
| SYNPCC7002_RS15660 () | 99795..100562 | - | 768 | WP_012305566.1 | MORN repeat-containing protein | - |
| SYNPCC7002_RS16290 () | 100628..102163 | - | 1536 | WP_143589391.1 | TonB family protein | - |
| SYNPCC7002_RS16595 () | 102563..103114 | - | 552 | WP_143589390.1 | ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS16600 () | 103077..103418 | - | 342 | WP_049761806.1 | hypothetical protein | VF |
| SYNPCC7002_RS16305 () | 103575..104621 | - | 1047 | WP_049761807.1 | Ferric aerobactin receptor | VF |
| SYNPCC7002_RS16310 () | 104581..105333 | - | 753 | WP_012305571.1 | hypothetical protein | - |
| SYNPCC7002_RS16315 () | 105330..106097 | - | 768 | WP_143589388.1 | Vitamin B12 transporter BtuB | VF |
| SYNPCC7002_RS15680 () | 106254..107234 | - | 981 | WP_012305573.1 | HTH-type transcriptional activator RhaR | VF |
| SYNPCC7002_RS15685 () | 107413..108459 | - | 1047 | WP_012305574.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS15690 () | 108509..111004 | - | 2496 | WP_012305575.1 | TonB-dependent receptor | - |
| SYNPCC7002_RS16320 () | 111195..112283 | - | 1089 | WP_012305576.1 | HTH-type transcriptional activator RhaS | VF |
| SYNPCC7002_RS15700 () | 112494..114269 | - | 1776 | WP_012305577.1 | Putative multidrug export ATP-binding/permease protein | VF |
| SYNPCC7002_RS15705 () | 114297..114695 | - | 399 | WP_012305578.1 | DUF1636 family protein | - |
| SYNPCC7002_RS15710 () | 114692..115717 | - | 1026 | WP_012305579.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS15715 () | 115742..118219 | - | 2478 | WP_012305580.1 | TonB-dependent siderophore receptor | - |
| SYNPCC7002_RS15720 () | 118451..119404 | - | 954 | WP_012305581.1 | HTH-type transcriptional activator RhaR | VF |
| SYNPCC7002_RS16535 () | 119572..119734 | - | 163 | Protein_105 | DUF433 domain-containing protein | - |
| SYNPCC7002_RS15725 () | 119817..121169 | - | 1353 | WP_012305582.1 | cytochrome P450 | - |
| SYNPCC7002_RS15730 () | 121454..123052 | + | 1599 | WP_012305583.1 | hypothetical protein | - |
| SYNPCC7002_RS15735 () | 123191..124921 | - | 1731 | WP_012305584.1 | ABC transporter ATP-binding protein/permease | - |
| SYNPCC7002_RS15740 () | 125067..125807 | - | 741 | WP_012305585.1 | SH3 domain-containing protein | - |
| SYNPCC7002_RS15745 () | 126059..126334 | - | 276 | WP_012305586.1 | hypothetical protein | - |
| SYNPCC7002_RS15750 () | 126711..127472 | + | 762 | WP_012305587.1 | hypothetical protein | - |
| SYNPCC7002_RS15755 () | 127476..128384 | - | 909 | WP_012305588.1 | zinc ribbon domain-containing protein | - |
| SYNPCC7002_RS15760 () | 128930..130756 | + | 1827 | WP_012305589.1 | hypothetical protein | - |
| SYNPCC7002_RS15765 () | 130968..131999 | + | 1032 | WP_143589450.1 | extracellular solute-binding protein | - |
| SYNPCC7002_RS15770 () | 131999..133585 | + | 1587 | WP_012305591.1 | iron ABC transporter permease | - |
| SYNPCC7002_RS15775 () | 133589..134245 | + | 657 | WP_012305592.1 | Fe(3+) ions import ATP-binding protein FbpC | VF |
| SYNPCC7002_RS15780 () | 134232..135284 | + | 1053 | WP_012305593.1 | transcriptional regulator | - |
| SYNPCC7002_RS16325 () | 135287..137776 | + | 2490 | WP_012305594.1 | hypothetical protein | - |
| SYNPCC7002_RS15790 () | 137770..138558 | + | 789 | WP_012305595.1 | zinc ribbon domain-containing protein | - |
| SYNPCC7002_RS15795 () | 138808..139173 | + | 366 | WP_203414989.1 | GFA family protein | - |
| SYNPCC7002_RS15800 () | 139440..140171 | + | 732 | WP_012305597.1 | DUF4386 domain-containing protein | - |
| SYNPCC7002_RS15805 () | 140189..140503 | + | 315 | WP_012305599.1 | AraC family transcriptional regulator ligand-binding domain-containing protein | - |
| SYNPCC7002_RS15810 () | 140467..141090 | - | 624 | WP_012305598.1 | hypothetical protein | - |
| SYNPCC7002_RS15815 () | 141505..143703 | + | 2199 | WP_012305600.1 | amino acid permease | - |
| SYNPCC7002_RS15820 () | 143821..144396 | + | 576 | WP_012305601.1 | DUF4126 domain-containing protein | - |
| SYNPCC7002_RS15825 () | 144816..145091 | + | 276 | WP_012305602.1 | hypothetical protein | - |
| SYNPCC7002_RS16330 () | 145460..146086 | - | 627 | WP_012305603.1 | DUF4360 domain-containing protein | - |
| SYNPCC7002_RS15835 () | 146775..147860 | + | 1086 | WP_012305604.1 | porphobilinogen synthase | - |
| SYNPCC7002_RS15840 () | 147982..148620 | + | 639 | WP_012305605.1 | GTP cyclohydrolase I FolE | - |
| SYNPCC7002_RS15845 () | 148716..149051 | - | 336 | WP_049761816.1 | hypothetical protein | - |
| SYNPCC7002_RS15850 () | 149172..149879 | - | 708 | WP_012305607.1 | hypothetical protein | - |
| SYNPCC7002_RS15855 () | 149990..150487 | - | 498 | WP_012305608.1 | hypothetical protein | - |
| SYNPCC7002_RS15860 () | 150622..151854 | + | 1233 | WP_012305609.1 | SidA/IucD/PvdA family monooxygenase | - |
| SYNPCC7002_RS15865 () | 152272..153522 | + | 1251 | WP_012305610.1 | hypothetical protein | - |
| SYNPCC7002_RS15870 () | 153649..155169 | + | 1521 | WP_012305611.1 | gamma-glutamyltransferase | - |
| SYNPCC7002_RS15875 () | 155214..156182 | - | 969 | WP_012305612.1 | sucrase ferredoxin | - |
| SYNPCC7002_RS15880 () | 156267..156689 | - | 423 | WP_012305613.1 | biopolymer transporter ExbD | - |
| SYNPCC7002_RS15885 () | 156778..157425 | - | 648 | WP_012305614.1 | MotA/TolQ/ExbB proton channel family protein | - |
| SYNPCC7002_RS15890 () | 157792..160173 | + | 2382 | WP_143589449.1 | Ferric aerobactin receptor | VF |
| SYNPCC7002_RS15895 () | 160294..161292 | + | 999 | WP_012305616.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS15900 () | 161364..162965 | - | 1602 | WP_012305617.1 | TROVE domain-containing protein | - |
| SYNPCC7002_RS15905 () | 163577..164308 | - | 732 | WP_012305618.1 | Phosphate-import ATP-binding protein PhnC | VF |
| SYNPCC7002_RS15910 () | 164567..165403 | - | 837 | WP_012305619.1 | phosphonate ABC transporter, permease protein PhnE | - |
| SYNPCC7002_RS15915 () | 165403..166332 | - | 930 | WP_143589385.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| SYNPCC7002_RS15925 () | 166576..167973 | + | 1398 | WP_012305621.1 | ATP synthase subunit beta | VF |
| SYNPCC7002_RS15930 () | 167970..168370 | + | 401 | Protein_146 | F0F1 ATP synthase subunit epsilon | - |
| SYNPCC7002_RS15935 () | 168367..168666 | + | 300 | WP_012305623.1 | AtpZ/AtpI family protein | - |
| SYNPCC7002_RS15940 () | 168782..169093 | + | 312 | WP_012305624.1 | ATP synthase subunit I | - |
| SYNPCC7002_RS15945 () | 169101..169802 | + | 702 | WP_012305625.1 | F0F1 ATP synthase subunit A | - |
| SYNPCC7002_RS15950 () | 169799..170074 | + | 276 | WP_012305626.1 | F0F1 ATP synthase subunit C | - |
| SYNPCC7002_RS15955 () | 170077..170829 | + | 753 | WP_012305627.1 | F0F1 ATP synthase subunit B | - |
| SYNPCC7002_RS15960 () | 170860..172398 | + | 1539 | WP_012305628.1 | ATP synthase subunit alpha | VF |
| SYNPCC7002_RS15965 () | 172402..173325 | + | 924 | WP_012305629.1 | F0F1 ATP synthase subunit gamma | - |
| SYNPCC7002_RS15970 () | 173343..175439 | - | 2097 | WP_012305630.1 | hypothetical protein | VF |
| SYNPCC7002_RS15975 () | 175803..176771 | - | 969 | WP_012305631.1 | L-histidine N(alpha)-methyltransferase | - |
| SYNPCC7002_RS15980 () | 176819..178126 | - | 1308 | WP_012305632.1 | ergothioneine biosynthesis protein EgtB | - |
| SYNPCC7002_RS15985 () | 178161..178655 | - | 495 | WP_012305633.1 | DUF427 domain-containing protein | - |
| SYNPCC7002_RS15990 () | 178784..179713 | - | 930 | WP_012305634.1 | hypothetical protein | - |
| SYNPCC7002_RS15995 () | 180125..180796 | - | 672 | WP_012305635.1 | Response regulator MprA | VF |
| SYNPCC7002_RS16000 () | 180902..182410 | - | 1509 | WP_083764506.1 | HAMP domain-containing histidine kinase | - |
| SYNPCC7002_RS16005 () | 182432..183016 | - | 585 | WP_143589448.1 | cupin | - |
| SYNPCC7002_RS16885 () | 183289..183585 | - | 297 | WP_156785491.1 | hypothetical protein | - |
| SYNPCC7002_RS16015 () | 183607..184002 | + | 396 | WP_012305639.1 | hypothetical protein | - |
| SYNPCC7002_RS16020 () | 184168..184893 | + | 726 | WP_083764508.1 | TVP38/TMEM64 family protein | - |
| SYNPCC7002_RS16025 () | 184913..185905 | - | 993 | WP_012305641.1 | 2-hydroxyacid dehydrogenase | - |
| SYNPCC7002_RS16030 () | 186066..186368 | + | 303 | WP_012305642.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|