MGE detailed information
MGE type: Genomic_island MGE length: 15977 bp
Accession: NC_010468 Location: 4265907..4281883 Organism: Escherichia coli ATCC 8739 Replicon: chromosome
Accession: NC_010468 Location: 4265907..4281883 Organism: Escherichia coli ATCC 8739 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECOLC_RS20895 () | 4262336..4265695 | - | 3360 | WP_012304922.1 | STY4851/ECs_5259 family protein | - |
| ECOLC_RS20900 () | 4265907..4267559 | + | 1653 | WP_000880884.1 | MotA/TolQ/ExbB proton channel family protein | - |
| ECOLC_RS20905 () | 4267566..4268273 | + | 708 | WP_000357805.1 | OmpA family protein | - |
| ECOLC_RS20910 () | 4268277..4269380 | + | 1104 | WP_000777276.1 | HNH endonuclease | - |
| ECOLC_RS20915 () | 4269605..4269847 | + | 243 | Protein_3982 | N-acetylneuraminic acid mutarotase | - |
| ECOLC_RS20920 () | 4269935..4270915 | + | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| ECOLC_RS20930 () | 4271141..4271338 | - | 198 | WP_001238008.1 | hypothetical protein | - |
| ECOLC_RS20935 () | 4271543..4272240 | + | 698 | Protein_3985 | IS1 family transposase | - |
| ECOLC_RS20940 () | 4272533..4274071 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| ECOLC_RS20945 () | 4274436..4275770 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| ECOLC_RS20950 () | 4275850..4277997 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| ECOLC_RS20955 () | 4278056..4279513 | + | 1458 | WP_000856835.1 | dipeptide/tripeptide permease DtpC | - |
| ECOLC_RS20960 () | 4279750..4281267 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| ECOLC_RS20965 () | 4281386..4281559 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| ECOLC_RS20970 () | 4281587..4281883 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| ECOLC_RS20975 () | 4282110..4282382 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| ECOLC_RS20980 () | 4282394..4282624 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| ECOLC_RS20985 () | 4282805..4284436 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| ECOLC_RS20990 () | 4284433..4285152 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|