MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68190 bp
Accession: NC_010157 Location: 1..68190 Organism: Yersinia pestis Angola Replicon: plasmid new_pCD
Accession: NC_010157 Location: 1..68190 Organism: Yersinia pestis Angola Replicon: plasmid new_pCD
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YPANGOLA_RS21980 () | 73..717 | + | 645 | Protein_0 | IS3 family transposase ISYen3 | Transposase |
| YPANGOLA_RS21985 () | 780..1172 | - | 393 | WP_002213403.1 | YopE regulator | VF |
| YPANGOLA_RS21990 () | 1366..2025 | + | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| YPANGOLA_RS21995 () | 2165..2464 | - | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| YPANGOLA_RS22000 () | 2457..2699 | - | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| YPANGOLA_RS24525 () | 2865..3157 | - | 293 | Protein_5 | IS6 family transposase ISEas1 | Transposase |
| YPANGOLA_RS25465 () | 3243..3416 | + | 174 | WP_002213357.1 | hypothetical protein | - |
| YPANGOLA_RS25285 () | 3565..3801 | - | 237 | WP_154020274.1 | hypothetical protein | - |
| YPANGOLA_RS22010 () | 3961..4926 | - | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| YPANGOLA_RS22015 () | 4923..6089 | - | 1167 | WP_002220902.1 | hypothetical protein | VF |
| YPANGOLA_RS25160 () | 6849..7994 | - | 1146 | Protein_10 | IS3 family transposase | - |
| YPANGOLA_RS22035 () | 8101..8730 | - | 630 | WP_002229770.1 | hypothetical protein | - |
| YPANGOLA_RS24535 () | 8876..9169 | - | 294 | Protein_12 | IS3 family transposase | - |
| YPANGOLA_RS22040 () | 9328..9876 | - | 549 | WP_002213007.1 | hypothetical protein | VF |
| YPANGOLA_RS22045 () | 10376..11344 | + | 969 | WP_002213006.1 | Cysteine protease YopT | VF |
| YPANGOLA_RS22050 () | 11344..11742 | + | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| YPANGOLA_RS24055 () | 12148..12429 | + | 282 | Protein_16 | DDE-type integrase/transposase/recombinase | - |
| YPANGOLA_RS22060 () | 12447..12866 | + | 420 | WP_002222515.1 | hypothetical protein | - |
| YPANGOLA_RS25165 () | 13394..13612 | - | 219 | Protein_18 | IS6 family transposase | - |
| YPANGOLA_RS25170 () | 13615..13860 | + | 246 | WP_116442925.1 | transposase | - |
| YPANGOLA_RS22065 () | 13742..14059 | + | 318 | Protein_20 | IS256 family transposase ISSod4 | Transposase |
| YPANGOLA_RS22070 () | 14102..15205 | - | 1104 | WP_002353322.1 | Outer membrane protein YopM | VF |
| YPANGOLA_RS22075 () | 15599..15808 | - | 210 | WP_002229781.1 | hypothetical protein | - |
| YPANGOLA_RS24540 () | 15829..16466 | + | 638 | Protein_23 | IS6 family transposase | - |
| YPANGOLA_RS22080 () | 16934..17854 | - | 921 | WP_002212987.1 | Protein YopD | VF |
| YPANGOLA_RS22085 () | 17873..19078 | - | 1206 | WP_002212985.1 | Protein YopB | VF |
| YPANGOLA_RS22090 () | 19056..19562 | - | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| YPANGOLA_RS22095 () | 19575..20555 | - | 981 | WP_012228705.1 | Virulence-associated V antigen | VF |
| YPANGOLA_RS22100 () | 20557..20844 | - | 288 | WP_012228713.1 | hypothetical protein | VF |
| YPANGOLA_RS22105 () | 20886..21326 | - | 441 | WP_002220918.1 | hypothetical protein | VF |
| YPANGOLA_RS22110 () | 21323..23437 | - | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| YPANGOLA_RS22115 () | 23424..23768 | - | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| YPANGOLA_RS22120 () | 23765..24133 | - | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| YPANGOLA_RS22125 () | 24130..24501 | - | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| YPANGOLA_RS22130 () | 24488..24766 | - | 279 | WP_002212965.1 | Protein TyeA | VF |
| YPANGOLA_RS22135 () | 24747..25628 | - | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| YPANGOLA_RS22140 () | 25826..27145 | + | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| YPANGOLA_RS22145 () | 27142..27606 | + | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| YPANGOLA_RS22150 () | 27606..28973 | + | 1368 | WP_002212950.1 | hypothetical protein | VF |
| YPANGOLA_RS22155 () | 28970..29893 | + | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| YPANGOLA_RS22160 () | 29890..30543 | + | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| YPANGOLA_RS22165 () | 30545..30811 | + | 267 | WP_002212945.1 | Surface presentation of antigens protein SpaQ | VF |
| YPANGOLA_RS22170 () | 30808..31593 | + | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| YPANGOLA_RS22175 () | 31593..32657 | + | 1065 | WP_012228726.1 | Yop proteins translocation protein U | VF |
| YPANGOLA_RS22180 () | 33232..33627 | + | 396 | WP_002222527.1 | Type 3 secretion system pilotin | VF |
| YPANGOLA_RS22185 () | 33751..34566 | + | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| YPANGOLA_RS22190 () | 34645..34743 | + | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| YPANGOLA_RS22195 () | 34969..35382 | + | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| YPANGOLA_RS22200 () | 35388..37211 | + | 1824 | WP_002212923.1 | Type 3 secretion system secretin | VF |
| YPANGOLA_RS22205 () | 37208..38467 | + | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| YPANGOLA_RS22210 () | 38464..38664 | + | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| YPANGOLA_RS22215 () | 38665..38928 | + | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| YPANGOLA_RS22220 () | 38930..39277 | + | 348 | WP_002229801.1 | Putative Yop proteins translocation protein G | VF |
| YPANGOLA_RS22225 () | 39274..39771 | + | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| YPANGOLA_RS22230 () | 39772..40119 | + | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| YPANGOLA_RS22235 () | 40126..40860 | + | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| YPANGOLA_RS22240 () | 40860..41489 | + | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| YPANGOLA_RS22245 () | 41435..42100 | + | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| YPANGOLA_RS22250 () | 42325..42672 | + | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| YPANGOLA_RS24545 () | 43220..44249 | + | 1030 | Protein_59 | IS3 family transposase | - |
| YPANGOLA_RS24085 () | 44268..44540 | + | 273 | Protein_60 | transposase | - |
| YPANGOLA_RS22270 () | 44761..46167 | - | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| YPANGOLA_RS22275 () | 46450..46683 | - | 234 | Protein_62 | transposase domain-containing protein | - |
| YPANGOLA_RS22280 () | 46686..47264 | + | 579 | Protein_63 | IS3 family transposase ISYpe1 | Transposase |
| YPANGOLA_RS22285 () | 47850..48716 | - | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| YPANGOLA_RS22290 () | 49112..51301 | - | 2190 | WP_002397022.1 | Protein kinase YpkA | VF |
| YPANGOLA_RS22295 () | 51309..51758 | - | 450 | WP_002229809.1 | hypothetical protein | VF |
| YPANGOLA_RS24095 () | 52014..52311 | - | 298 | Protein_67 | transposase | - |
| YPANGOLA_RS24105 () | 52489..52728 | - | 240 | WP_002213291.1 | hypothetical protein | - |
| YPANGOLA_RS22300 () | 53900..54778 | - | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| YPANGOLA_RS22305 () | 54759..54833 | - | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| YPANGOLA_RS22310 () | 55075..55329 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| YPANGOLA_RS22315 () | 55467..55715 | - | 249 | WP_002233137.1 | hypothetical protein | VF |
| YPANGOLA_RS24115 () | 55841..56149 | + | 309 | Protein_73 | DDE-type integrase/transposase/recombinase | - |
| YPANGOLA_RS25180 () | 56132..56539 | - | 408 | WP_002213294.1 | IS3 family transposase ISKpn37 | Transposase |
| YPANGOLA_RS22325 () | 56563..56880 | - | 318 | WP_002213008.1 | IS3 family transposase ISKpn37 | Transposase |
| YPANGOLA_RS22330 () | 57052..57510 | - | 459 | WP_002213246.1 | hypothetical protein | - |
| YPANGOLA_RS22335 () | 57579..57848 | + | 270 | WP_042469136.1 | transposase | - |
| YPANGOLA_RS25470 () | 57946..58104 | - | 159 | Protein_78 | EamA family transporter | - |
| YPANGOLA_RS24125 () | 58177..59477 | - | 1301 | Protein_79 | Adhesin YadA | VF |
| YPANGOLA_RS22355 () | 60077..60427 | + | 351 | Protein_80 | IS3 family transposase IS1351 | Transposase |
| YPANGOLA_RS22360 () | 60460..62775 | - | 2316 | WP_002213256.1 | Tn3 family transposase ISEc63 | Transposase |
| YPANGOLA_RS22365 () | 62939..63490 | + | 552 | WP_012228742.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| YPANGOLA_RS22370 () | 63509..63973 | + | 465 | WP_002224338.1 | hypothetical protein | - |
| YPANGOLA_RS22375 () | 64112..64441 | + | 330 | WP_002229829.1 | hypothetical protein | - |
| YPANGOLA_RS22385 () | 64541..65640 | + | 1100 | WP_144405501.1 | IS3 family transposase ISYpe1 | Transposase |
| YPANGOLA_RS22390 () | 65788..66213 | - | 426 | WP_002213267.1 | hypothetical protein | VF |
| YPANGOLA_RS22395 () | 66590..66988 | - | 399 | Protein_87 | IS21 family transposase IS21 | Transposase |
| YPANGOLA_RS22400 () | 66988..68160 | - | 1173 | WP_002220893.1 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|