MGE detailed information
MGE type: Prophage MGE length: 48055 bp
Accession: NC_010125 Location: 1050440..1098494 Organism: Gluconacetobacter diazotrophicus PAl 5 Replicon: chromosome
Accession: NC_010125 Location: 1050440..1098494 Organism: Gluconacetobacter diazotrophicus PAl 5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDI_RS04920 () | 1046547..1047563 | - | 1017 | Protein_975 | class II fructose-bisphosphatase | - |
| GDI_RS04925 () | 1047612..1048925 | - | 1314 | WP_012554380.1 | homoserine dehydrogenase | - |
| GDI_RS04930 () | 1049029..1050252 | - | 1224 | WP_012223916.1 | LL-diaminopimelate aminotransferase | - |
| GDI_RS04935 () | 1050440..1051516 | - | 1077 | WP_012223917.1 | hypothetical protein | - |
| GDI_RS04940 () | 1051735..1052409 | + | 675 | WP_012223918.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| GDI_RS04945 () | 1052519..1053511 | + | 993 | WP_012223919.1 | ferritin-like domain-containing protein | - |
| GDI_RS04950 () | 1053508..1054371 | + | 864 | WP_012223920.1 | hypothetical protein | - |
| GDI_RS04955 () | 1054457..1054714 | + | 258 | WP_012223921.1 | hypothetical protein | - |
| GDI_RS04960 () | 1054769..1054954 | - | 186 | WP_041249297.1 | hypothetical protein | - |
| GDI_RS04965 () | 1055090..1055383 | - | 294 | WP_157870995.1 | hypothetical protein | - |
| GDI_RS04970 () | 1055398..1055826 | + | 429 | WP_041249299.1 | MFS transporter | - |
| GDI_RS04975 () | 1055978..1057795 | + | 1818 | WP_012223923.1 | DUF885 family protein | - |
| GDI_RS19660 () | 1058195..1058485 | - | 291 | WP_144880446.1 | hypothetical protein | - |
| GDI_RS04990 () | 1060095..1060811 | + | 717 | WP_041249300.1 | YfdX family protein | - |
| GDI_RS04995 () | 1060846..1062285 | - | 1440 | WP_041249301.1 | NCS1 family nucleobase:cation symporter-1 | - |
| GDI_RS05000 () | 1062475..1062738 | + | 264 | Protein_991 | IS1182 family transposase ISGdi13 | Transposase |
| GDI_RS05005 () | 1062744..1063084 | + | 341 | Protein_992 | IS481 family transposase ISGdi10 | Transposase |
| GDI_RS19665 () | 1063136..1063650 | - | 515 | Protein_993 | IS3 family transposase ISGxy1 | Transposase |
| GDI_RS05020 () | 1063714..1064127 | + | 414 | Protein_994 | Tn3 family transposase ISPsy42 | Transposase |
| GDI_RS18900 () | 1064362..1065072 | + | 711 | WP_012223932.1 | M23 family metallopeptidase | - |
| GDI_RS05025 () | 1065235..1065789 | + | 555 | WP_041249303.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GDI_RS05035 () | 1066586..1067595 | + | 1010 | Protein_997 | IS3 family transposase ISGdi11 | Transposase |
| GDI_RS05040 () | 1067937..1068158 | + | 222 | WP_041249208.1 | hypothetical protein | - |
| GDI_RS18910 () | 1068148..1068420 | + | 273 | Protein_999 | recombinase family protein | - |
| GDI_RS05050 () | 1068580..1069029 | - | 450 | Protein_1000 | IS5 family transposase ISGdi1 | Transposase |
| GDI_RS05055 () | 1069166..1069723 | + | 558 | WP_012223947.1 | phosphate-starvation-inducible PsiE family protein | - |
| GDI_RS05065 () | 1070105..1071332 | + | 1228 | Protein_1002 | IS3 family transposase ISGdi14 | Transposase |
| GDI_RS05070 () | 1071510..1071992 | - | 483 | WP_012223951.1 | Hsp20 family protein | - |
| GDI_RS05075 () | 1072028..1072309 | - | 282 | WP_039905436.1 | hypothetical protein | - |
| GDI_RS20140 () | 1072479..1072571 | + | 93 | WP_197535947.1 | YXWGXW repeat-containing protein | - |
| GDI_RS05080 () | 1073092..1073340 | + | 249 | WP_010511782.1 | hypothetical protein | - |
| GDI_RS05085 () | 1073449..1073712 | + | 264 | WP_010511780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GDI_RS05090 () | 1073705..1074049 | + | 345 | WP_012223960.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GDI_RS05095 () | 1074082..1074759 | + | 678 | Protein_1009 | hypothetical protein ; Integrase | Integrase |
| GDI_RS18915 () | 1074987..1075187 | + | 201 | Protein_1010 | IS630 family transposase ISGdi4 | Transposase |
| GDI_RS05100 () | 1075224..1075685 | + | 462 | Protein_1011 | IS256 family transposase ISApr14 | Transposase |
| GDI_RS05105 () | 1075734..1076096 | - | 363 | Protein_1012 | IS630 family transposase ISGdi5 | Transposase |
| GDI_RS05115 () | 1076208..1077325 | + | 1118 | WP_157870996.1 | IS3 family transposase ISGdi11 | Transposase |
| GDI_RS05120 () | 1077462..1078673 | - | 1212 | WP_041249691.1 | hypothetical protein | - |
| GDI_RS05125 () | 1078703..1079803 | - | 1101 | WP_012224132.1 | dTDP-4-amino-4,6-dideoxy-D-glucose transaminase | VF |
| GDI_RS18920 () | 1080151..1080597 | + | 447 | Protein_1016 | IS630 family transposase ISGdi5 | Transposase |
| GDI_RS05135 () | 1080644..1081255 | - | 612 | Protein_1017 | IS256 family transposase ISApr14 | Transposase |
| GDI_RS05140 () | 1081309..1081962 | - | 654 | Protein_1018 | IS481 family transposase ISGdi10 | Transposase |
| GDI_RS18925 () | 1081970..1082416 | - | 447 | Protein_1019 | IS481 family transposase ISGdi9 | Transposase |
| GDI_RS19675 () | 1082445..1083392 | + | 948 | WP_162098029.1 | hypothetical protein | - |
| GDI_RS05150 () | 1083389..1085179 | + | 1791 | WP_012224136.1 | hypothetical protein | - |
| GDI_RS19680 () | 1085172..1086173 | + | 1002 | WP_012224137.1 | hypothetical protein | - |
| GDI_RS18930 () | 1086180..1086482 | + | 303 | WP_197535948.1 | IS110 family transposase ISGdi7 | Transposase |
| GDI_RS18935 () | 1086464..1086946 | - | 483 | Protein_1024 | IS110 family transposase ISGdi7 | Transposase |
| GDI_RS19685 () | 1087026..1087147 | - | 122 | Protein_1025 | IS630 family transposase | - |
| GDI_RS05160 () | 1087204..1087824 | + | 621 | Protein_1026 | IS256 family transposase ISAzs19 | Transposase |
| GDI_RS05165 () | 1087943..1089004 | + | 1062 | WP_041249309.1 | IS481 family transposase ISGdi10 | Transposase |
| GDI_RS05170 () | 1089117..1089608 | + | 492 | Protein_1028 | IS3 family transposase ISGdi14 | Transposase |
| GDI_RS19690 () | 1089681..1089896 | + | 216 | WP_157864196.1 | hypothetical protein | - |
| GDI_RS05175 () | 1090060..1090719 | + | 660 | Protein_1030 | IS21 family transposase ISGdi17 | Transposase |
| GDI_RS05180 () | 1090777..1091412 | + | 636 | Protein_1031 | IS21 family transposase ISGdi17 | Transposase |
| GDI_RS05185 () | 1091452..1092654 | - | 1203 | Protein_1032 | IS3 family transposase ISGdi14 | Transposase |
| GDI_RS19695 () | 1092672..1092890 | + | 219 | WP_157864168.1 | hypothetical protein | - |
| GDI_RS05200 () | 1092944..1094123 | + | 1180 | Protein_1034 | IS1182 family transposase ISGdi13 | Transposase |
| GDI_RS19700 () | 1094225..1094367 | + | 143 | Protein_1035 | IS630 family transposase | - |
| GDI_RS05205 () | 1094406..1095230 | - | 825 | WP_012553437.1 | IS5 family transposase ISGdi2 | Transposase |
| GDI_RS05210 () | 1095852..1096109 | + | 258 | Protein_1037 | conjugal transfer protein TrbF | - |
| GDI_RS05215 () | 1096109..1097095 | + | 987 | WP_012224144.1 | P-type conjugative transfer protein TrbG | - |
| GDI_RS05220 () | 1097158..1098252 | + | 1095 | WP_173363400.1 | Type IV secretion system protein virB10 | VF |
| GDI_RS05225 () | 1098249..1098494 | + | 246 | WP_012224146.1 | DUF2274 domain-containing protein | - |
| GDI_RS18940 () | 1098466..1099344 | - | 879 | WP_012224147.1 | LysR family transcriptional regulator | - |
| GDI_RS05230 () | 1099453..1100928 | - | 1476 | WP_012224149.1 | efflux transporter outer membrane subunit | - |
| GDI_RS05235 () | 1101064..1101672 | + | 609 | WP_012224151.1 | TetR/AcrR family transcriptional regulator | - |
| GDI_RS05240 () | 1101757..1102857 | + | 1101 | WP_012224153.1 | efflux RND transporter periplasmic adaptor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|