MGE detailed information
MGE type: Prophage MGE length: 32175 bp
Accession: NC_009801 Location: 1256977..1289151 Organism: Escherichia coli E24377A Replicon: chromosome
Accession: NC_009801 Location: 1256977..1289151 Organism: Escherichia coli E24377A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECE24377A_RS07685 () | 1252884..1254083 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| ECE24377A_RS07690 () | 1254076..1254777 | + | 702 | WP_001033694.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| ECE24377A_RS07695 () | 1254777..1256021 | + | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| ECE24377A_RS07700 () | 1256050..1256961 | + | 912 | WP_000291287.1 | N-acetylglucosamine kinase | - |
| ECE24377A_RS07705 () | 1256977..1257798 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| ECE24377A_RS07710 () | 1257937..1258725 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| ECE24377A_RS07715 () | 1258722..1259183 | - | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| ECE24377A_RS07720 () | 1259241..1260287 | - | 1047 | WP_000759321.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| ECE24377A_RS07725 () | 1260284..1261078 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| ECE24377A_RS07730 () | 1261387..1261590 | + | 204 | WP_000824138.1 | hypothetical protein | - |
| ECE24377A_RS07735 () | 1261568..1262035 | + | 468 | WP_001113310.1 | DUF2335 domain-containing protein | - |
| ECE24377A_RS07740 () | 1262112..1263230 | - | 1119 | WP_000074996.1 | hypothetical protein ; Integrase | Integrase |
| ECE24377A_RS07745 () | 1263199..1263468 | - | 270 | WP_000003742.1 | excisionase | - |
| ECE24377A_RS07750 () | 1263530..1265907 | - | 2378 | Protein_1159 | 3'-5' exoribonuclease | - |
| ECE24377A_RS07755 () | 1266001..1266192 | - | 192 | WP_001083283.1 | lysis protein YdfD | - |
| ECE24377A_RS07760 () | 1266189..1266377 | - | 189 | WP_000449196.1 | cell division inhibition protein DicB | - |
| ECE24377A_RS07765 () | 1266941..1267150 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| ECE24377A_RS07770 () | 1267151..1267789 | - | 639 | WP_012138129.1 | hypothetical protein | - |
| ECE24377A_RS07775 () | 1267801..1267953 | - | 153 | WP_001394175.1 | DUF1391 family protein | - |
| ECE24377A_RS07780 () | 1268245..1268523 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECE24377A_RS07785 () | 1268525..1268716 | - | 192 | WP_012138131.1 | hypothetical protein | Antitoxin Detail |
| ECE24377A_RS29295 () | 1268737..1269108 | - | 372 | WP_001169688.1 | hypothetical protein | - |
| ECE24377A_RS07795 () | 1269207..1269509 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| ECE24377A_RS07800 () | 1269506..1269931 | + | 426 | WP_000693838.1 | Rha family transcriptional regulator | - |
| ECE24377A_RS07805 () | 1269955..1270902 | + | 948 | WP_000095679.1 | helix-turn-helix domain-containing protein | - |
| ECE24377A_RS07810 () | 1270909..1271655 | + | 747 | WP_000788770.1 | ATP-binding protein | - |
| ECE24377A_RS07815 () | 1271677..1272438 | + | 762 | WP_000450664.1 | DUF1627 domain-containing protein | - |
| ECE24377A_RS07820 () | 1272454..1272876 | + | 423 | WP_001151247.1 | DUF977 family protein | - |
| ECE24377A_RS07825 () | 1272879..1273291 | + | 413 | Protein_1174 | DUF4406 domain-containing protein | - |
| ECE24377A_RS29955 () | 1273395..1273817 | + | 423 | WP_000160144.1 | hypothetical protein | - |
| ECE24377A_RS07835 () | 1274108..1274263 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ECE24377A_RS29310 () | 1274431..1274709 | + | 279 | WP_032155008.1 | hypothetical protein | - |
| ECE24377A_RS07845 () | 1274711..1275766 | + | 1056 | WP_001265302.1 | DUF968 domain-containing protein | - |
| ECE24377A_RS07850 () | 1275767..1276132 | + | 366 | WP_000140027.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ECE24377A_RS07855 () | 1276129..1276818 | + | 690 | WP_001064887.1 | antiterminator | - |
| ECE24377A_RS07860 () | 1276963..1277727 | + | 765 | WP_000392434.1 | serine/threonine protein kinase | - |
| ECE24377A_RS07865 () | 1277724..1278467 | + | 744 | WP_000615424.1 | protein phosphatase 2C domain-containing protein | - |
| ECE24377A_RS07870 () | 1278687..1278884 | + | 198 | WP_000917766.1 | hypothetical protein | - |
| ECE24377A_RS07875 () | 1279035..1280084 | + | 1050 | WP_000185912.1 | site-specific DNA-methyltransferase | - |
| ECE24377A_RS07895 () | 1280563..1280823 | + | 261 | WP_000904532.1 | hypothetical protein | - |
| ECE24377A_RS07900 () | 1280912..1281304 | + | 393 | WP_001294587.1 | holin | - |
| ECE24377A_RS07905 () | 1281294..1281569 | + | 276 | WP_001471414.1 | phage holin family protein | - |
| ECE24377A_RS07910 () | 1281572..1281949 | + | 378 | WP_001117824.1 | M15 family metallopeptidase | - |
| ECE24377A_RS30455 () | 1281964..1282146 | + | 183 | WP_126125481.1 | hypothetical protein | - |
| ECE24377A_RS07915 () | 1282234..1282443 | + | 210 | WP_000958717.1 | hypothetical protein | - |
| ECE24377A_RS07930 () | 1283292..1283846 | + | 555 | WP_000867507.1 | terminase small subunit | - |
| ECE24377A_RS07935 () | 1283798..1284043 | + | 246 | Protein_1192 | hypothetical protein | VF |
| ECE24377A_RS27650 () | 1284108..1287521 | + | 3414 | WP_000279135.1 | prophage tail fiber N-terminal domain-containing protein | - |
| ECE24377A_RS07960 () | 1287521..1288105 | + | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| ECE24377A_RS07965 () | 1288160..1288828 | - | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| ECE24377A_RS07970 () | 1288885..1289151 | + | 267 | WP_000937496.1 | tail fiber assembly protein | - |
| ECE24377A_RS07975 () | 1289384..1290247 | - | 864 | WP_000798514.1 | spermidine/putrescine ABC transporter permease PotB | - |
| ECE24377A_RS07980 () | 1290231..1291367 | - | 1137 | WP_000531602.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| ECE24377A_RS07990 () | 1291617..1292846 | + | 1230 | WP_000359447.1 | peptidase T | - |
| ECE24377A_RS07995 () | 1292992..1294113 | - | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|