MGE detailed information
MGE type: Prophage MGE length: 57679 bp
Accession: NC_009708 Location: 2500421..2558099 Organism: Yersinia pseudotuberculosis IP 31758 Replicon: chromosome
Accession: NC_009708 Location: 2500421..2558099 Organism: Yersinia pseudotuberculosis IP 31758 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
YPSIP31758_RS12140 () | 2495875..2496702 | - | 828 | WP_012105193.1 | carbohydrate ABC transporter permease | - |
YPSIP31758_RS12145 () | 2496695..2497541 | - | 847 | Protein_2091 | sugar ABC transporter permease | - |
YPSIP31758_RS12150 () | 2497608..2498876 | - | 1269 | WP_012105195.1 | sugar ABC transporter substrate-binding protein | - |
YPSIP31758_RS12155 () | 2498906..2499919 | - | 1014 | WP_012105196.1 | Gfo/Idh/MocA family oxidoreductase | - |
YPSIP31758_RS24360 () | 2500333..2500536 | + | 204 | WP_155407247.1 | hypothetical protein | - |
YPSIP31758_RS12165 () | 2500580..2501374 | - | 795 | WP_012105199.1 | GntR family transcriptional regulator | - |
YPSIP31758_RS23295 () | 2501719..2502045 | - | 327 | Protein_2096 | DDE-type integrase/transposase/recombinase | - |
YPSIP31758_RS12180 () | 2502343..2502777 | + | 435 | WP_002215417.1 | hypothetical protein | - |
YPSIP31758_RS12185 () | 2502789..2503358 | + | 570 | WP_002213205.1 | hypothetical protein | - |
YPSIP31758_RS12190 () | 2503776..2504974 | - | 1199 | Protein_2099 | IS256 family transposase IS285 | Transposase |
YPSIP31758_RS12195 () | 2505022..2506098 | - | 1077 | WP_012105200.1 | toll/interleukin-1 receptor domain-containing protein | - |
YPSIP31758_RS12200 () | 2506164..2506454 | - | 291 | WP_002213209.1 | BrnA antitoxin family protein | - |
YPSIP31758_RS12205 () | 2506435..2506706 | - | 272 | Protein_2102 | BrnT family toxin | - |
YPSIP31758_RS12210 () | 2506842..2507096 | + | 255 | WP_002213211.1 | phage baseplate assembly protein V | - |
YPSIP31758_RS12215 () | 2507093..2507392 | + | 300 | WP_002213212.1 | GPW/gp25 family protein | - |
YPSIP31758_RS12220 () | 2507409..2507696 | + | 288 | WP_002215413.1 | hypothetical protein | - |
YPSIP31758_RS23300 () | 2508131..2508649 | + | 519 | WP_012105201.1 | DUF2778 domain-containing protein | - |
YPSIP31758_RS12240 () | 2509054..2510223 | + | 1170 | WP_012105202.1 | phage tail sheath protein | - |
YPSIP31758_RS12245 () | 2510235..2510750 | + | 516 | WP_012105203.1 | phage major tail tube protein | - |
YPSIP31758_RS12250 () | 2510804..2511151 | + | 348 | WP_011192297.1 | phage tail assembly protein | - |
YPSIP31758_RS23305 () | 2511166..2511285 | + | 120 | WP_071819140.1 | GpE family phage tail protein | - |
YPSIP31758_RS12255 () | 2511278..2514194 | + | 2917 | Protein_2111 | phage tail tape measure protein | - |
YPSIP31758_RS12260 () | 2514206..2514670 | + | 465 | WP_012105204.1 | phage tail protein | - |
YPSIP31758_RS12265 () | 2514667..2515761 | + | 1095 | WP_012105205.1 | phage late control D family protein | - |
YPSIP31758_RS12270 () | 2515836..2516051 | + | 216 | WP_012105206.1 | ogr/Delta-like zinc finger family protein | - |
YPSIP31758_RS12275 () | 2516836..2517270 | + | 435 | WP_012105207.1 | hypothetical protein | - |
YPSIP31758_RS12280 () | 2517282..2517851 | + | 570 | WP_012105208.1 | hypothetical protein | - |
YPSIP31758_RS12285 () | 2518391..2519047 | - | 657 | WP_012105209.1 | tail fiber assembly protein | - |
YPSIP31758_RS12290 () | 2519047..2519544 | - | 498 | WP_080869059.1 | phage tail protein | - |
YPSIP31758_RS24050 () | 2519752..2520255 | - | 504 | Protein_2119 | hypothetical protein | - |
YPSIP31758_RS12300 () | 2520267..2520911 | - | 645 | WP_012105211.1 | DUF2612 domain-containing protein | - |
YPSIP31758_RS12305 () | 2520904..2522103 | - | 1200 | WP_012105212.1 | baseplate J/gp47 family protein | - |
YPSIP31758_RS12310 () | 2522103..2522453 | - | 351 | WP_012105213.1 | hypothetical protein | - |
YPSIP31758_RS12315 () | 2522527..2523204 | - | 678 | WP_012105214.1 | hypothetical protein | - |
YPSIP31758_RS12320 () | 2523212..2524105 | - | 894 | WP_012105215.1 | hypothetical protein | - |
YPSIP31758_RS12325 () | 2524098..2524388 | - | 291 | WP_012105216.1 | hypothetical protein | - |
YPSIP31758_RS12330 () | 2524388..2525056 | - | 669 | WP_012105217.1 | hypothetical protein | - |
YPSIP31758_RS24365 () | 2525056..2525646 | - | 591 | WP_129192660.1 | glycoside hydrolase family 104 protein | - |
YPSIP31758_RS23310 () | 2525827..2526912 | - | 1086 | Protein_2128 | lysozyme | - |
YPSIP31758_RS12340 () | 2527043..2527549 | - | 507 | WP_041175770.1 | hypothetical protein | - |
YPSIP31758_RS12345 () | 2527623..2527868 | - | 246 | WP_041175771.1 | Arc family DNA-binding protein | - |
YPSIP31758_RS24370 () | 2527970..2528116 | + | 147 | WP_165285869.1 | hypothetical protein | - |
YPSIP31758_RS24055 () | 2528182..2529087 | + | 906 | WP_012105221.1 | ORF6N domain-containing protein | - |
YPSIP31758_RS12355 () | 2529153..2529625 | - | 473 | Protein_2133 | DNA-binding protein | - |
YPSIP31758_RS22570 () | 2529909..2530559 | - | 651 | WP_012105223.1 | hypothetical protein | - |
YPSIP31758_RS23315 () | 2530850..2531173 | + | 324 | WP_012105224.1 | Arc family DNA-binding protein | - |
YPSIP31758_RS12375 () | 2531255..2531710 | + | 456 | WP_012105225.1 | hypothetical protein | - |
YPSIP31758_RS12380 () | 2531956..2532345 | - | 390 | WP_012105227.1 | hypothetical protein | - |
YPSIP31758_RS12385 () | 2532348..2532752 | - | 405 | WP_012105228.1 | hypothetical protein | - |
YPSIP31758_RS12390 () | 2532759..2533916 | - | 1158 | WP_012105229.1 | DUF3383 family protein | - |
YPSIP31758_RS12395 () | 2533900..2534460 | - | 561 | WP_012105230.1 | hypothetical protein | - |
YPSIP31758_RS12400 () | 2534460..2534879 | - | 420 | WP_012105231.1 | hypothetical protein | - |
YPSIP31758_RS12405 () | 2534882..2535538 | - | 657 | WP_012105232.1 | hypothetical protein | - |
YPSIP31758_RS12410 () | 2535538..2536737 | - | 1200 | WP_012105233.1 | DUF2213 domain-containing protein | - |
YPSIP31758_RS12415 () | 2536749..2537498 | - | 750 | WP_041175772.1 | phage head morphogenesis protein | - |
YPSIP31758_RS12420 () | 2537557..2538942 | - | 1386 | WP_012105235.1 | DUF1073 domain-containing protein | - |
YPSIP31758_RS12425 () | 2538945..2540588 | - | 1644 | WP_012105236.1 | phage terminase large subunit | - |
YPSIP31758_RS12430 () | 2540715..2540954 | + | 240 | WP_012105237.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
YPSIP31758_RS12435 () | 2540944..2541228 | + | 285 | WP_012105238.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
YPSIP31758_RS12440 () | 2541239..2542255 | - | 1017 | WP_012105239.1 | terminase small subunit | - |
YPSIP31758_RS12445 () | 2542259..2542519 | - | 261 | WP_012105240.1 | hypothetical protein | - |
YPSIP31758_RS12450 () | 2542522..2543121 | - | 600 | WP_197276492.1 | protein Mom | - |
YPSIP31758_RS12455 () | 2543133..2543642 | - | 510 | WP_012105242.1 | ParB/Srx family N-terminal domain-containing protein | - |
YPSIP31758_RS12460 () | 2544119..2544319 | + | 201 | WP_197276493.1 | DUF2158 domain-containing protein | - |
YPSIP31758_RS12465 () | 2544367..2544603 | + | 237 | WP_041175868.1 | hypothetical protein | - |
YPSIP31758_RS12470 () | 2544820..2545089 | - | 270 | WP_041175773.1 | hypothetical protein | - |
YPSIP31758_RS12475 () | 2545388..2545651 | - | 264 | Protein_2156 | lysozyme | - |
YPSIP31758_RS12480 () | 2545651..2545866 | - | 216 | WP_041175774.1 | peptidoglycan-binding protein LysM | - |
YPSIP31758_RS12485 () | 2546146..2546373 | + | 228 | WP_012105248.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
YPSIP31758_RS12490 () | 2546397..2546750 | + | 354 | WP_012105249.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
YPSIP31758_RS12495 () | 2546909..2547355 | - | 447 | WP_012105250.1 | antitermination protein | - |
YPSIP31758_RS12500 () | 2547352..2547636 | - | 285 | WP_041175775.1 | DUF1364 domain-containing protein | - |
YPSIP31758_RS12505 () | 2547645..2548238 | - | 594 | WP_012105251.1 | DUF1367 family protein | - |
YPSIP31758_RS12510 () | 2549026..2549505 | + | 480 | WP_071838965.1 | hypothetical protein | VF |
YPSIP31758_RS23320 () | 2549569..2549751 | - | 183 | WP_071838966.1 | hypothetical protein | - |
YPSIP31758_RS24375 () | 2549765..2550505 | - | 741 | WP_012105252.1 | hypothetical protein | - |
YPSIP31758_RS12530 () | 2550939..2551181 | - | 243 | WP_012105254.1 | hypothetical protein | - |
YPSIP31758_RS23325 () | 2551271..2552644 | - | 1374 | WP_012105255.1 | replicative DNA helicase | - |
YPSIP31758_RS12540 () | 2552641..2553684 | - | 1044 | WP_012105256.1 | hypothetical protein | - |
YPSIP31758_RS12545 () | 2553687..2553911 | - | 225 | WP_041175776.1 | hypothetical protein | - |
YPSIP31758_RS12550 () | 2553928..2554392 | - | 465 | WP_012105257.1 | hypothetical protein | - |
YPSIP31758_RS12555 () | 2554426..2554632 | - | 207 | WP_012105258.1 | Cro/Cl family transcriptional regulator | - |
YPSIP31758_RS12560 () | 2554724..2555386 | + | 663 | WP_181949711.1 | helix-turn-helix domain-containing protein | - |
YPSIP31758_RS12565 () | 2555727..2555963 | + | 237 | WP_012105260.1 | DUF4224 domain-containing protein | - |
YPSIP31758_RS12570 () | 2555953..2556969 | + | 1017 | WP_012105261.1 | hypothetical protein ; Integrase | Integrase |
YPSIP31758_RS12590 () | 2557551..2558099 | - | 549 | WP_002220475.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
YPSIP31758_RS12595 () | 2558158..2559990 | - | 1833 | WP_002220477.1 | excinuclease ABC subunit UvrC | - |
YPSIP31758_RS12600 () | 2559983..2560639 | - | 657 | WP_002211176.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
YPSIP31758_RS12605 () | 2561303..2561527 | + | 225 | WP_002211175.1 | DUF2594 family protein | - |
YPSIP31758_RS12610 () | 2561655..2561996 | + | 342 | WP_002218408.1 | GlpM family protein | - |
YPSIP31758_RS12615 () | 2562024..2562278 | - | 255 | WP_002211173.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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