MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 47973 bp
Accession: NC_009485 Location: 434291..482263 Organism: Bradyrhizobium sp. BTAi1 Replicon: chromosome
Accession: NC_009485 Location: 434291..482263 Organism: Bradyrhizobium sp. BTAi1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBTA_RS02045 () | 429677..430060 | - | 384 | WP_008961803.1 | 50S ribosomal protein L21 | - |
| BBTA_RS02050 () | 430423..431562 | + | 1140 | WP_012040766.1 | ROK family protein | - |
| BBTA_RS02055 () | 432049..432708 | + | 660 | WP_012040767.1 | porin family protein | - |
| BBTA_RS38465 () | 433004..434626 | - | 1623 | WP_012040768.1 | recombinase family protein | - |
| BBTA_RS02080 () | 434688..434996 | - | 309 | WP_038313315.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| BBTA_RS02085 () | 435011..435307 | - | 297 | WP_038313318.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BBTA_RS40605 () | 435368..435613 | - | 246 | WP_038313322.1 | hypothetical protein | - |
| BBTA_RS02095 () | 435603..435821 | - | 219 | WP_012040772.1 | AlpA family transcriptional regulator | - |
| BBTA_RS02100 () | 435951..438857 | - | 2907 | WP_012040773.1 | Ti-type conjugative transfer relaxase TraA | - |
| BBTA_RS02105 () | 439029..439355 | + | 327 | WP_012040774.1 | conjugal transfer protein TraD | - |
| BBTA_RS02110 () | 439357..439575 | + | 219 | WP_012040775.1 | conjugal transfer protein TraD | - |
| BBTA_RS02115 () | 439697..440272 | + | 576 | Protein_415 | IS256 family transposase ISMdi13 | Transposase |
| BBTA_RS02125 () | 440337..441475 | + | 1139 | WP_148221383.1 | IS3 family transposase ISPmar2 | Transposase |
| BBTA_RS02130 () | 441552..442787 | - | 1236 | WP_034461138.1 | IS110 family transposase ISMch4 | Transposase |
| BBTA_RS02135 () | 443032..443274 | + | 243 | Protein_418 | IS256 family transposase | - |
| BBTA_RS02140 () | 443334..444332 | - | 999 | WP_012040782.1 | LysR family transcriptional regulator | - |
| BBTA_RS02145 () | 444370..445386 | + | 1017 | WP_012040783.1 | class 1 fructose-bisphosphatase | - |
| BBTA_RS02150 () | 445413..446300 | + | 888 | WP_012040784.1 | phosphoribulokinase | - |
| BBTA_RS02155 () | 446297..448312 | + | 2016 | WP_012040785.1 | transketolase | - |
| BBTA_RS02160 () | 448309..449316 | + | 1008 | WP_012040786.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| BBTA_RS02165 () | 449313..450515 | + | 1203 | WP_012040787.1 | phosphoglycerate kinase | - |
| BBTA_RS02170 () | 450533..451612 | + | 1080 | WP_024918864.1 | fructose-bisphosphate aldolase class II | - |
| BBTA_RS02175 () | 451632..453098 | + | 1467 | WP_012040789.1 | form I ribulose bisphosphate carboxylase large subunit | - |
| BBTA_RS02180 () | 453109..453528 | + | 420 | WP_012040790.1 | ribulose bisphosphate carboxylase small subunit | - |
| BBTA_RS02185 () | 453619..454623 | + | 1005 | WP_012040791.1 | Protein CbbX | VF |
| BBTA_RS02190 () | 454620..455351 | + | 732 | WP_012040792.1 | Ribulose-phosphate 3-epimerase | VF |
| BBTA_RS02195 () | 455348..456580 | + | 1233 | WP_041750269.1 | class II fructose-bisphosphate aldolase | - |
| BBTA_RS02200 () | 456577..457239 | + | 663 | WP_024918867.1 | phosphoglycolate phosphatase | - |
| BBTA_RS02205 () | 457236..457946 | + | 711 | WP_012040795.1 | HAD family hydrolase | - |
| BBTA_RS02210 () | 458042..459493 | + | 1452 | WP_012040796.1 | Hydrogenase transcriptional regulatory protein hupR1 | VF |
| BBTA_RS02215 () | 459943..460905 | + | 963 | WP_024918868.1 | hydrogenase | - |
| BBTA_RS02220 () | 460952..462550 | + | 1599 | WP_012040798.1 | nickel-dependent hydrogenase large subunit | - |
| BBTA_RS02225 () | 462630..462944 | + | 315 | WP_012040799.1 | hypothetical protein | - |
| BBTA_RS02230 () | 462985..463314 | + | 330 | WP_012040800.1 | hypothetical protein | - |
| BBTA_RS02235 () | 463329..463805 | + | 477 | WP_024918870.1 | hydrogenase maturation protease | - |
| BBTA_RS02240 () | 463802..464110 | + | 309 | WP_024918871.1 | hypothetical protein | - |
| BBTA_RS02245 () | 464220..465242 | + | 1023 | WP_103168462.1 | hypothetical protein | - |
| BBTA_RS02250 () | 465264..465476 | + | 213 | WP_024918872.1 | hypothetical protein | - |
| BBTA_RS02255 () | 465486..465710 | + | 225 | WP_012040805.1 | hypothetical protein | - |
| BBTA_RS02260 () | 465724..466593 | + | 870 | WP_012040806.1 | NifU family protein | - |
| BBTA_RS02265 () | 466593..467789 | + | 1197 | WP_024918873.1 | NHL repeat-containing protein | - |
| BBTA_RS02270 () | 467786..470245 | + | 2460 | WP_024918874.1 | carbamoyltransferase HypF | - |
| BBTA_RS02275 () | 470215..470496 | + | 282 | WP_024918875.1 | HypC/HybG/HupF family hydrogenase formation chaperone | - |
| BBTA_RS02280 () | 470513..471205 | + | 693 | WP_024918876.1 | Phosphoheptose isomerase | VF |
| BBTA_RS02285 () | 471202..472350 | + | 1149 | WP_012040811.1 | hydrogenase formation protein HypD | - |
| BBTA_RS02290 () | 472347..473417 | + | 1071 | WP_012040812.1 | hydrogenase expression/formation protein HypE | - |
| BBTA_RS02295 () | 473430..473768 | + | 339 | WP_012040813.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| BBTA_RS02300 () | 473768..474781 | + | 1014 | WP_024918877.1 | hydrogenase nickel incorporation protein HypB | - |
| BBTA_RS02305 () | 474871..475470 | + | 600 | WP_024918878.1 | HupE/UreJ family protein | - |
| BBTA_RS38555 () | 475793..476549 | + | 757 | WP_085972572.1 | IS5 family transposase | - |
| BBTA_RS02315 () | 476945..477688 | + | 744 | WP_012040820.1 | DUF2786 domain-containing protein | - |
| BBTA_RS02320 () | 477712..478320 | - | 609 | WP_012040821.1 | hypothetical protein | - |
| BBTA_RS02325 () | 478558..478893 | + | 336 | WP_012040822.1 | MmcQ/YjbR family DNA-binding protein | - |
| BBTA_RS02330 () | 478932..479825 | - | 894 | WP_012040823.1 | myo-inosose-2 dehydratase | - |
| BBTA_RS02335 () | 479835..481667 | - | 1833 | WP_012040824.1 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | - |
| BBTA_RS02340 () | 481688..482692 | - | 1005 | WP_012040825.1 | inositol 2-dehydrogenase | - |
| BBTA_RS02345 () | 483206..484282 | - | 1077 | WP_012040826.1 | hypothetical protein | - |
| BBTA_RS02350 () | 484785..485282 | + | 498 | WP_012040827.1 | YchJ family protein | - |
| BBTA_RS02355 () | 485574..487082 | + | 1509 | WP_012040828.1 | glycosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|