MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 75875 bp
Accession: NC_008825 Location: 2498157..2574031 Organism: Methylibium petroleiphilum PM1 Replicon: chromosome
Accession: NC_008825 Location: 2498157..2574031 Organism: Methylibium petroleiphilum PM1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPE_RS11735 () | 2494715..2496193 | + | 1479 | WP_011829917.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| MPE_RS11740 () | 2496223..2497119 | + | 897 | WP_085984414.1 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| MPE_RS11745 () | 2497113..2498111 | - | 999 | WP_011829919.1 | diguanylate cyclase | - |
| MPE_RS11750 () | 2498408..2499316 | - | 909 | WP_011829921.1 | LysR family transcriptional regulator | - |
| MPE_RS11755 () | 2500227..2501138 | + | 912 | WP_011829923.1 | LysR family transcriptional regulator | - |
| MPE_RS11760 () | 2501670..2502431 | + | 762 | WP_011829924.1 | hypothetical protein | - |
| MPE_RS11765 () | 2502550..2502768 | + | 219 | WP_011829925.1 | AlpA family transcriptional regulator | - |
| MPE_RS11770 () | 2502809..2503675 | + | 867 | WP_041929662.1 | hypothetical protein | VF |
| MPE_RS11775 () | 2503659..2503895 | + | 237 | WP_041929663.1 | type II toxin-antitoxin system HicA family toxin | - |
| MPE_RS11780 () | 2503888..2505546 | + | 1659 | WP_011829927.1 | ParB family protein | - |
| MPE_RS11785 () | 2505564..2506124 | + | 561 | WP_011829928.1 | DUF2857 domain-containing protein | - |
| MPE_RS11790 () | 2506127..2507329 | + | 1203 | WP_011829929.1 | hypothetical protein | - |
| MPE_RS11795 () | 2507450..2507821 | + | 372 | WP_011829930.1 | hypothetical protein | Antitoxin Detail |
| MPE_RS11800 () | 2507818..2508345 | + | 528 | WP_011829931.1 | RES family NAD+ phosphorylase | Toxin Detail |
| MPE_RS11805 () | 2508529..2509317 | + | 789 | WP_011829932.1 | TIGR03761 family integrating conjugative element protein | - |
| MPE_RS11810 () | 2509314..2509862 | + | 549 | WP_011829933.1 | DUF3158 family protein | - |
| MPE_RS11815 () | 2509859..2510242 | + | 384 | WP_004362284.1 | single-stranded DNA-binding protein | - |
| MPE_RS11820 () | 2510537..2512552 | + | 2016 | WP_011829934.1 | DNA topoisomerase III | - |
| MPE_RS23305 () | 2513072..2513902 | - | 831 | WP_011829935.1 | arsenate reductase (glutaredoxin) | - |
| MPE_RS11830 () | 2513899..2514990 | - | 1092 | WP_011829936.1 | ACR3 family arsenite efflux transporter | - |
| MPE_RS11835 () | 2515000..2515497 | - | 498 | WP_011829937.1 | arsenate reductase ArsC | - |
| MPE_RS11840 () | 2515510..2515974 | - | 465 | WP_011829938.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| MPE_RS11845 () | 2515986..2516315 | - | 330 | WP_011829939.1 | helix-turn-helix domain-containing protein | - |
| MPE_RS11850 () | 2516665..2516901 | + | 237 | WP_011829940.1 | hypothetical protein | - |
| MPE_RS11855 () | 2516928..2517320 | + | 393 | WP_011829941.1 | hypothetical protein | - |
| MPE_RS11860 () | 2517571..2518287 | + | 717 | WP_041929664.1 | hypothetical protein | - |
| MPE_RS23805 () | 2518428..2518553 | - | 126 | Protein_2364 | MerR family transcriptional regulator | - |
| MPE_RS23310 () | 2518542..2518709 | + | 168 | Protein_2365 | GTPase | - |
| MPE_RS11870 () | 2518711..2519163 | - | 453 | WP_202796698.1 | helix-turn-helix domain-containing protein | - |
| MPE_RS11875 () | 2519256..2521217 | + | 1962 | WP_011829945.1 | FTR1 family protein | - |
| MPE_RS11880 () | 2521293..2522495 | + | 1203 | WP_011829946.1 | DUF3703 domain-containing protein | - |
| MPE_RS11885 () | 2522492..2523094 | + | 603 | WP_011829947.1 | cation diffusion facilitator family transporter | - |
| MPE_RS11890 () | 2523169..2524434 | + | 1266 | WP_011829948.1 | TolC family protein | - |
| MPE_RS11895 () | 2524443..2525372 | + | 930 | WP_202796699.1 | efflux RND transporter periplasmic adaptor subunit | - |
| MPE_RS11900 () | 2525383..2528565 | + | 3183 | WP_041930124.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| MPE_RS11905 () | 2528605..2529198 | + | 594 | WP_011829950.1 | MAPEG family protein | - |
| MPE_RS11910 () | 2529321..2529884 | + | 564 | WP_011829951.1 | EF-hand domain-containing protein | - |
| MPE_RS11915 () | 2530528..2531079 | + | 552 | WP_010792166.1 | DUF3577 domain-containing protein | - |
| MPE_RS11920 () | 2531135..2531746 | + | 612 | WP_011829953.1 | DUF3275 family protein | - |
| MPE_RS11925 () | 2531836..2532201 | + | 366 | WP_011829954.1 | hypothetical protein | - |
| MPE_RS11930 () | 2532286..2532936 | + | 651 | WP_011829955.1 | hypothetical protein | - |
| MPE_RS11935 () | 2533002..2534111 | + | 1110 | WP_011829956.1 | O-methyltransferase | - |
| MPE_RS11940 () | 2534214..2534519 | + | 306 | WP_011829957.1 | hypothetical protein | - |
| MPE_RS11945 () | 2534619..2536892 | + | 2274 | WP_011829958.1 | DEAD/DEAH box helicase | - |
| MPE_RS11950 () | 2537088..2537813 | - | 726 | WP_011829959.1 | CBASS effector endonuclease NucC | - |
| MPE_RS11955 () | 2537814..2538761 | - | 948 | WP_011829960.1 | ATP-binding protein | - |
| MPE_RS11960 () | 2538761..2539276 | - | 516 | WP_011829961.1 | hypothetical protein | - |
| MPE_RS11965 () | 2539282..2540247 | - | 966 | WP_011829962.1 | nucleotidyltransferase | - |
| MPE_RS11970 () | 2540439..2540762 | + | 324 | WP_011829963.1 | helix-turn-helix domain-containing protein | - |
| MPE_RS11975 () | 2540759..2541628 | + | 870 | WP_011829964.1 | ImmA/IrrE family metallo-endopeptidase | - |
| MPE_RS11980 () | 2541730..2542311 | + | 582 | WP_011829965.1 | hypothetical protein | VF |
| MPE_RS11985 () | 2542308..2542955 | + | 648 | WP_011829966.1 | hypothetical protein | - |
| MPE_RS11990 () | 2543042..2543761 | + | 720 | WP_011829967.1 | TIGR03759 family integrating conjugative element protein | - |
| MPE_RS11995 () | 2543746..2544366 | + | 621 | WP_011829968.1 | hypothetical protein | VF |
| MPE_RS12000 () | 2544363..2544896 | + | 534 | WP_003141015.1 | integrating conjugative element protein | - |
| MPE_RS12005 () | 2544905..2547061 | + | 2157 | WP_011829969.1 | type IV conjugative transfer system coupling protein TraD | - |
| MPE_RS12010 () | 2547058..2547807 | + | 750 | WP_011829970.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| MPE_RS12015 () | 2547804..2548895 | - | 1092 | WP_011829971.1 | phospholipase D family protein | - |
| MPE_RS22770 () | 2548914..2549837 | - | 924 | WP_011829972.1 | site-specific DNA-methyltransferase | - |
| MPE_RS12025 () | 2549854..2552052 | - | 2199 | WP_011829973.1 | N-6 DNA methylase | - |
| MPE_RS23315 () | 2552056..2552232 | - | 177 | WP_148211052.1 | ribbon-helix-helix domain-containing protein | - |
| MPE_RS12030 () | 2552450..2552797 | + | 348 | WP_011829975.1 | RAQPRD family integrative conjugative element protein | - |
| MPE_RS12035 () | 2552794..2553033 | + | 240 | WP_011829976.1 | TIGR03758 family integrating conjugative element protein | - |
| MPE_RS12040 () | 2553056..2553430 | + | 375 | WP_011829977.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| MPE_RS12045 () | 2553443..2553853 | + | 411 | WP_011829978.1 | TIGR03750 family conjugal transfer protein | - |
| MPE_RS12050 () | 2553850..2554542 | + | 693 | WP_011829979.1 | TIGR03746 family integrating conjugative element protein | - |
| MPE_RS12055 () | 2554539..2555453 | + | 915 | WP_011829980.1 | TIGR03749 family integrating conjugative element protein | - |
| MPE_RS12060 () | 2555443..2556876 | + | 1434 | WP_011829981.1 | TIGR03752 family integrating conjugative element protein | - |
| MPE_RS12065 () | 2556857..2557291 | + | 435 | WP_011829982.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| MPE_RS12070 () | 2557291..2560179 | + | 2889 | WP_011829983.1 | conjugative transfer ATPase | - |
| MPE_RS12075 () | 2560193..2560936 | + | 744 | WP_011829984.1 | DsbA family protein | - |
| MPE_RS12080 () | 2561132..2561626 | + | 495 | WP_011829985.1 | DNA repair protein RadC | - |
| MPE_RS12085 () | 2561792..2562241 | + | 450 | WP_011829986.1 | TIGR03757 family integrating conjugative element protein | - |
| MPE_RS12090 () | 2562238..2563182 | + | 945 | WP_011829987.1 | TIGR03756 family integrating conjugative element protein | - |
| MPE_RS12095 () | 2563193..2564599 | + | 1407 | WP_011829988.1 | integrating conjugative element protein | - |
| MPE_RS12100 () | 2564596..2564949 | + | 354 | WP_011829989.1 | hypothetical protein | - |
| MPE_RS12105 () | 2564965..2566488 | + | 1524 | WP_011829990.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| MPE_RS12110 () | 2566505..2566879 | - | 375 | WP_041929667.1 | DUF3742 family protein | - |
| MPE_RS12115 () | 2567102..2567860 | + | 759 | WP_041929668.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| MPE_RS12120 () | 2567853..2568773 | + | 921 | WP_011829993.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| MPE_RS12125 () | 2568977..2570815 | + | 1839 | WP_011829994.1 | TraI domain-containing protein | - |
| MPE_RS12130 () | 2570842..2571141 | - | 300 | WP_003282197.1 | helix-turn-helix domain-containing protein | - |
| MPE_RS12135 () | 2571248..2571874 | + | 627 | WP_041929669.1 | substrate-binding domain-containing protein | - |
| MPE_RS12140 () | 2571922..2573775 | - | 1854 | WP_011829996.1 | hypothetical protein ; Integrase | Integrase |
| MPE_RS24320 () | 2574377..2575096 | - | 720 | WP_083767971.1 | collagen-like protein | - |
| MPE_RS24000 () | 2575870..2576373 | - | 504 | WP_011829999.1 | hypothetical protein | - |
| MPE_RS22775 () | 2576789..2577922 | + | 1134 | WP_011830000.1 | PAS and helix-turn-helix domain-containing protein | - |
| MPE_RS12160 () | 2577919..2578890 | - | 972 | WP_011830001.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|