MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 58808 bp
Accession: NC_008761 Location: 1..58808 Organism: Polaromonas naphthalenivorans CJ2 Replicon: plasmid pPNAP05
Accession: NC_008761 Location: 1..58808 Organism: Polaromonas naphthalenivorans CJ2 Replicon: plasmid pPNAP05
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PNAP_RS26560 () | 1158..1565 | + | 408 | WP_011798537.1 | hypothetical protein | - |
| PNAP_RS24370 () | 1583..2455 | - | 873 | WP_011798538.1 | DNA-binding protein | - |
| PNAP_RS24375 () | 3682..3879 | + | 198 | WP_011798539.1 | hypothetical protein | - |
| PNAP_RS24380 () | 4046..4576 | - | 531 | WP_041377825.1 | hypothetical protein | - |
| PNAP_RS24385 () | 4584..5000 | - | 417 | WP_011798541.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PNAP_RS24390 () | 4997..5251 | - | 255 | WP_011798542.1 | plasmid stabilization protein | Antitoxin Detail |
| PNAP_RS24395 () | 5469..5756 | + | 288 | WP_049763857.1 | hypothetical protein | - |
| PNAP_RS24400 () | 5856..6098 | - | 243 | WP_011798544.1 | tail fiber protein | - |
| PNAP_RS26565 () | 6621..7325 | + | 705 | WP_011798545.1 | hypothetical protein | - |
| PNAP_RS24405 () | 7325..7567 | + | 243 | WP_011798546.1 | phosphoribulokinase | - |
| PNAP_RS24410 () | 7765..8313 | + | 549 | Protein_10 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| PNAP_RS24415 () | 8670..9197 | - | 528 | WP_011798548.1 | hypothetical protein | - |
| PNAP_RS24420 () | 9239..10309 | - | 1071 | WP_011798549.1 | poly(3-hydroxybutyrate) depolymerase | - |
| PNAP_RS24425 () | 10458..10820 | - | 363 | WP_157040562.1 | transposase family protein | - |
| PNAP_RS24430 () | 10867..11025 | + | 159 | Protein_14 | recombinase family protein | - |
| PNAP_RS26570 () | 11708..12745 | - | 1038 | WP_011798551.1 | TrfA family protein | - |
| PNAP_RS26575 () | 12820..13128 | - | 309 | WP_011798552.1 | hypothetical protein | - |
| PNAP_RS24435 () | 13125..13754 | - | 630 | WP_011798553.1 | ParA family protein | - |
| PNAP_RS24440 () | 14048..15601 | + | 1554 | WP_011798554.1 | type I restriction-modification system subunit M | - |
| PNAP_RS24445 () | 15591..16838 | + | 1248 | WP_011798555.1 | restriction endonuclease subunit S | - |
| PNAP_RS24450 () | 16835..17920 | + | 1086 | WP_011798556.1 | DUF1016 family protein | - |
| PNAP_RS24455 () | 18022..18414 | + | 393 | WP_041377816.1 | DUF1311 domain-containing protein | - |
| PNAP_RS25370 () | 18431..19348 | + | 918 | WP_049763856.1 | hypothetical protein | - |
| PNAP_RS24465 () | 19345..22434 | + | 3090 | WP_011798559.1 | type I restriction endonuclease subunit R | - |
| PNAP_RS24470 () | 22591..23646 | - | 1056 | WP_011798560.1 | hypothetical protein | - |
| PNAP_RS26580 () | 23770..24048 | - | 279 | WP_011798561.1 | hypothetical protein | - |
| PNAP_RS24475 () | 24090..24344 | - | 255 | WP_011798562.1 | hypothetical protein | - |
| PNAP_RS26585 () | 24402..24638 | - | 237 | WP_157040567.1 | DUF2188 domain-containing protein | - |
| PNAP_RS24485 () | 24931..25662 | - | 732 | WP_011797944.1 | IS21 family transposase ISBmu3 | Transposase |
| PNAP_RS24490 () | 25704..27242 | - | 1539 | WP_011797945.1 | IS21 family transposase ISRme9 | Transposase |
| PNAP_RS24495 () | 27575..28204 | + | 630 | WP_157040563.1 | hypothetical protein | - |
| PNAP_RS24500 () | 28201..28617 | + | 417 | WP_011798565.1 | hypothetical protein | - |
| PNAP_RS24505 () | 28604..29371 | + | 768 | WP_157040564.1 | ImmA/IrrE family metallo-endopeptidase | - |
| PNAP_RS24510 () | 29627..30814 | - | 1188 | WP_011798567.1 | XRE family transcriptional regulator | - |
| PNAP_RS24515 () | 30822..31463 | - | 642 | WP_011798568.1 | hypothetical protein | - |
| PNAP_RS24520 () | 31549..32130 | - | 582 | WP_011798569.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| PNAP_RS24525 () | 32650..38079 | - | 5430 | WP_011798570.1 | NACHT domain-containing protein | - |
| PNAP_RS24530 () | 38473..38901 | + | 429 | WP_011798571.1 | hypothetical protein | - |
| PNAP_RS24535 () | 38898..39350 | + | 453 | WP_011798572.1 | DUF2442 domain-containing protein | - |
| PNAP_RS24540 () | 39355..40350 | + | 996 | WP_011798573.1 | tyrosine-type recombinase/integrase | - |
| PNAP_RS24545 () | 40498..41442 | + | 945 | WP_157040565.1 | DNA/RNA non-specific endonuclease | - |
| PNAP_RS24550 () | 41897..49429 | + | 7533 | WP_011798575.1 | toprim domain-containing protein | - |
| PNAP_RS24555 () | 49675..51102 | + | 1428 | Protein_42 | IS1182 family transposase ISBusp4 | Transposase |
| PNAP_RS24560 () | 51354..51734 | - | 381 | WP_011798577.1 | PIN domain-containing protein | Toxin Detail |
| PNAP_RS24565 () | 51731..51937 | - | 207 | WP_011798578.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PNAP_RS25375 () | 52074..53060 | - | 987 | WP_011798579.1 | hypothetical protein | - |
| PNAP_RS24585 () | 53528..54124 | - | 597 | WP_157040568.1 | Uma2 family endonuclease | - |
| PNAP_RS24590 () | 54174..55154 | - | 981 | WP_011798581.1 | GIY-YIG nuclease family protein | - |
| PNAP_RS24595 () | 55422..55634 | + | 213 | WP_041377830.1 | helix-turn-helix transcriptional regulator | - |
| PNAP_RS26595 () | 56019..56228 | + | 210 | WP_083758115.1 | DUF4926 domain-containing protein | - |
| PNAP_RS24605 () | 56233..57133 | + | 901 | Protein_50 | DNA/RNA non-specific endonuclease | - |
| PNAP_RS24610 () | 57078..57341 | + | 264 | WP_011798584.1 | hypothetical protein | - |
| PNAP_RS24615 () | 57390..57596 | - | 207 | WP_011798585.1 | putative transcriptional regulator | - |
| PNAP_RS24620 () | 57909..58718 | - | 810 | WP_011798586.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|