MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 143747 bp
Accession: NC_008760 Location: 1..143747 Organism: Polaromonas naphthalenivorans CJ2 Replicon: plasmid pPNAP04
Accession: NC_008760 Location: 1..143747 Organism: Polaromonas naphthalenivorans CJ2 Replicon: plasmid pPNAP04
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PNAP_RS23665 () | 275..1255 | + | 981 | WP_041377790.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| PNAP_RS27425 () | 1258..1425 | + | 168 | WP_157040543.1 | hypothetical protein | - |
| PNAP_RS23670 () | 1595..2566 | - | 972 | WP_011798406.1 | LysR family transcriptional regulator | - |
| PNAP_RS23675 () | 2676..4043 | + | 1368 | WP_011798407.1 | D-serine ammonia-lyase | - |
| PNAP_RS23680 () | 4080..5042 | + | 963 | WP_011798408.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| PNAP_RS23685 () | 5039..6207 | + | 1169 | Protein_6 | DSD1 family PLP-dependent enzyme | - |
| PNAP_RS23690 () | 6239..7759 | + | 1521 | WP_011798409.1 | Acylamidase | VF |
| PNAP_RS23695 () | 8668..8955 | - | 288 | WP_041377791.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PNAP_RS23700 () | 8966..9184 | - | 219 | WP_041377792.1 | hypothetical protein | - |
| PNAP_RS26470 () | 9786..10094 | - | 309 | Protein_10 | ISNCY family transposase ISKpn21 | Transposase |
| PNAP_RS23705 () | 10265..10786 | - | 522 | WP_041377793.1 | MarR family transcriptional regulator | - |
| PNAP_RS23710 () | 11157..12359 | - | 1203 | WP_011798415.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PNAP_RS23715 () | 12359..13327 | - | 969 | WP_011798416.1 | PDR/VanB family oxidoreductase | - |
| PNAP_RS23720 () | 13367..14350 | - | 984 | WP_011798417.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| PNAP_RS23725 () | 14401..15390 | - | 990 | WP_011798418.1 | 4,5-dihydroxyphthalate decarboxylase | - |
| PNAP_RS23730 () | 15393..16712 | - | 1320 | WP_041377761.1 | Rieske 2Fe-2S domain-containing protein | - |
| PNAP_RS23735 () | 16736..17200 | - | 465 | WP_041377794.1 | hypothetical protein | - |
| PNAP_RS23740 () | 17527..17736 | + | 210 | WP_041377762.1 | transposase | - |
| PNAP_RS23745 () | 17675..17953 | + | 279 | WP_157040544.1 | hypothetical protein | - |
| PNAP_RS23750 () | 18006..19049 | - | 1044 | WP_076611837.1 | IS701 family transposase ISPna6 | Transposase |
| PNAP_RS27430 () | 19363..19512 | - | 150 | WP_157040545.1 | hypothetical protein | - |
| PNAP_RS23755 () | 19862..20719 | + | 858 | WP_011798423.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| PNAP_RS23760 () | 20814..21116 | + | 303 | WP_011798424.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| PNAP_RS23765 () | 21119..21520 | + | 402 | WP_011798425.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| PNAP_RS23770 () | 22595..22801 | + | 207 | WP_157040546.1 | hypothetical protein | - |
| PNAP_RS23775 () | 22839..25060 | + | 2222 | Protein_26 | DEAD/DEAH box helicase | - |
| PNAP_RS23780 () | 25476..26951 | - | 1476 | WP_041377765.1 | hypothetical protein | - |
| PNAP_RS23785 () | 27252..27458 | - | 207 | Protein_28 | IS66 family transposase ISPpu19 | Transposase |
| PNAP_RS23790 () | 27458..27769 | - | 312 | WP_041376462.1 | hypothetical protein | - |
| PNAP_RS23795 () | 27967..30036 | + | 2070 | WP_011798428.1 | Tn3 family transposase ISPsy42 | Transposase |
| PNAP_RS23800 () | 30049..31449 | - | 1401 | WP_157040557.1 | IS66 family transposase ISBcen19 | Transposase |
| PNAP_RS23805 () | 32075..33033 | + | 959 | Protein_32 | IS110 family transposase IS5708 | Transposase |
| PNAP_RS26475 () | 33073..33267 | + | 195 | Protein_33 | IS4 family transposase ISAzo5 | Transposase |
| PNAP_RS26480 () | 33334..34608 | - | 1275 | WP_157040548.1 | VWA domain-containing protein | - |
| PNAP_RS27435 () | 34938..35119 | + | 182 | Protein_35 | IS66 family transposase IS883 | Transposase |
| PNAP_RS26695 () | 35274..35441 | - | 168 | Protein_36 | IS5 family transposase ISAba37 | Transposase |
| PNAP_RS27805 () | 35589..35693 | - | 105 | Protein_37 | IS5 family transposase ISAau3 | Transposase |
| PNAP_RS23820 () | 35810..37090 | + | 1281 | WP_011798435.1 | IS5 family transposase ISPna3 | Transposase |
| PNAP_RS23825 () | 37056..37787 | - | 732 | Protein_39 | IS5 family transposase ISAau3 | Transposase |
| PNAP_RS26700 () | 37863..38147 | - | 285 | WP_086000582.1 | IS3 family transposase ISXca1 | Transposase |
| PNAP_RS27440 () | 38271..38375 | - | 105 | Protein_41 | IS3 family transposase ISXca1 | Transposase |
| PNAP_RS23835 () | 38415..38773 | - | 359 | Protein_42 | IS3 family transposase IS407 | Transposase |
| PNAP_RS23840 () | 38842..39069 | - | 228 | WP_041377766.1 | IS701 family transposase ISMesi2 | Transposase |
| PNAP_RS26495 () | 39299..40243 | + | 945 | WP_011798440.1 | hypothetical protein | - |
| PNAP_RS23845 () | 40483..41526 | + | 1044 | WP_041377801.1 | DUF475 domain-containing protein | - |
| PNAP_RS23850 () | 41568..42146 | + | 579 | WP_011798442.1 | TerD family protein | - |
| PNAP_RS23855 () | 42183..42758 | + | 576 | WP_011798443.1 | TerD family protein | - |
| PNAP_RS23865 () | 43355..43936 | + | 582 | WP_011798444.1 | TerD family protein | - |
| PNAP_RS23870 () | 43944..44963 | + | 1020 | WP_011798445.1 | ATP-grasp domain-containing protein | - |
| PNAP_RS23875 () | 45017..46171 | + | 1155 | WP_011798446.1 | phosphoribosyltransferase domain-containing protein | - |
| PNAP_RS23880 () | 46149..46904 | + | 756 | WP_011798447.1 | hypothetical protein | - |
| PNAP_RS23885 () | 46901..47992 | + | 1092 | WP_011798448.1 | cysteine protease StiP family protein | - |
| PNAP_RS23890 () | 47985..48932 | + | 948 | WP_011798449.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
| PNAP_RS23895 () | 48935..50191 | + | 1257 | WP_041377768.1 | TerD family protein | - |
| PNAP_RS23900 () | 50202..51701 | - | 1500 | WP_011798451.1 | kinase | - |
| PNAP_RS23905 () | 51798..53021 | - | 1224 | WP_198140750.1 | protein phosphatase 2C domain-containing protein | - |
| PNAP_RS23910 () | 53531..54583 | - | 1053 | WP_011798453.1 | VWA domain-containing protein | - |
| PNAP_RS23915 () | 54668..55309 | - | 642 | WP_011798454.1 | VWA domain-containing protein | - |
| PNAP_RS23920 () | 55316..55957 | - | 642 | WP_011798455.1 | TerD family protein | - |
| PNAP_RS23925 () | 55970..56608 | - | 639 | WP_011798456.1 | VWA domain-containing protein | - |
| PNAP_RS26500 () | 56855..57163 | - | 309 | WP_011798457.1 | hypothetical protein | - |
| PNAP_RS23930 () | 57275..57910 | - | 636 | WP_011798458.1 | DUF799 family lipoprotein | - |
| PNAP_RS23935 () | 57907..58269 | - | 363 | WP_011798459.1 | DUF4810 domain-containing protein | - |
| PNAP_RS23940 () | 58280..58612 | - | 333 | WP_011798460.1 | hypothetical protein | - |
| PNAP_RS23945 () | 58612..59625 | - | 1014 | WP_011798461.1 | curli production assembly protein CsgG | - |
| PNAP_RS23950 () | 59744..60301 | - | 558 | WP_049763843.1 | hypothetical protein | - |
| PNAP_RS23955 () | 60390..60749 | + | 360 | WP_011798463.1 | hypothetical protein | - |
| PNAP_RS23960 () | 60764..61523 | - | 760 | Protein_68 | IS5 family transposase | - |
| PNAP_RS23965 () | 61658..61933 | + | 276 | WP_157040559.1 | hypothetical protein | - |
| PNAP_RS27450 () | 62032..62190 | + | 159 | WP_157040551.1 | hypothetical protein | - |
| PNAP_RS23970 () | 62497..62937 | + | 441 | WP_041377805.1 | DUF3293 domain-containing protein | - |
| PNAP_RS27455 () | 63050..63277 | + | 228 | WP_157040552.1 | hypothetical protein | - |
| PNAP_RS23975 () | 63330..63785 | + | 456 | WP_011798467.1 | YbjN domain-containing protein | - |
| PNAP_RS23980 () | 63782..64255 | + | 474 | WP_011798468.1 | hypothetical protein | - |
| PNAP_RS23985 () | 64442..64915 | + | 474 | WP_011798469.1 | hypothetical protein | - |
| PNAP_RS23990 () | 64908..65852 | + | 945 | WP_011798470.1 | ADP-ribosylglycohydrolase family protein | - |
| PNAP_RS23995 () | 65962..66531 | + | 570 | WP_011798471.1 | alpha/beta hydrolase fold domain-containing protein | - |
| PNAP_RS24000 () | 66643..67548 | - | 906 | WP_011798472.1 | TniB family NTP-binding protein | - |
| PNAP_RS25320 () | 67549..68106 | - | 558 | WP_049763845.1 | Mu transposase C-terminal domain-containing protein | - |
| PNAP_RS25325 () | 68146..69357 | - | 1212 | WP_049763846.1 | DDE-type integrase/transposase/recombinase | - |
| PNAP_RS24010 () | 69633..70439 | + | 807 | WP_011798475.1 | hypothetical protein | - |
| PNAP_RS24015 () | 70526..70747 | - | 222 | WP_011798476.1 | YdcH family protein | - |
| PNAP_RS24020 () | 71222..73051 | + | 1830 | WP_011798477.1 | tyrosine-type recombinase/integrase | - |
| PNAP_RS25330 () | 73475..74461 | - | 987 | WP_049763847.1 | ParB/RepB/Spo0J family partition protein | - |
| PNAP_RS24030 () | 74464..75657 | - | 1194 | WP_011798479.1 | AAA family ATPase | - |
| PNAP_RS24035 () | 76189..77499 | + | 1311 | WP_041377775.1 | replication initiation protein | - |
| PNAP_RS27460 () | 77991..78278 | - | 288 | WP_041377776.1 | helix-turn-helix domain-containing protein | - |
| PNAP_RS24045 () | 78689..79819 | + | 1131 | WP_041377777.1 | MBL fold metallo-hydrolase | - |
| PNAP_RS27465 () | 80286..80435 | + | 150 | WP_157040554.1 | hypothetical protein | - |
| PNAP_RS25335 () | 80432..81538 | + | 1107 | WP_011798484.1 | ParB/RepB/Spo0J family partition protein | - |
| PNAP_RS27470 () | 81787..81954 | - | 168 | WP_157040555.1 | hypothetical protein | - |
| PNAP_RS24060 () | 82226..83228 | + | 1003 | Protein_92 | lyase | - |
| PNAP_RS24065 () | 83264..84334 | + | 1071 | WP_011798485.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| PNAP_RS27475 () | 84339..84533 | + | 195 | WP_157040560.1 | Uma2 family endonuclease | - |
| PNAP_RS24075 () | 84547..84753 | - | 207 | Protein_95 | IS66 family transposase ISPpu19 | Transposase |
| PNAP_RS24080 () | 84753..85064 | - | 312 | WP_041376462.1 | hypothetical protein | - |
| PNAP_RS24085 () | 85262..87331 | + | 2070 | WP_011798428.1 | Tn3 family transposase ISPsy42 | Transposase |
| PNAP_RS24090 () | 87344..88750 | - | 1407 | WP_011798486.1 | IS66 family transposase ISBcen19 | Transposase |
| PNAP_RS24095 () | 88833..89174 | - | 342 | WP_011798487.1 | IS66 family transposase ISPpu30 | Transposase |
| PNAP_RS24100 () | 89171..89530 | - | 360 | WP_041377779.1 | IS66 family transposase ISBcen19 | Transposase |
| PNAP_RS24105 () | 89640..89930 | + | 291 | WP_198140745.1 | IS66 family transposase ISSal1 | Transposase |
| PNAP_RS24110 () | 90055..91606 | + | 1552 | Protein_102 | IS66 family transposase ISBcen19 | Transposase |
| PNAP_RS24115 () | 91671..92828 | + | 1158 | WP_011798491.1 | transposase | - |
| PNAP_RS24120 () | 92961..93977 | + | 1017 | WP_011798492.1 | IS110 family transposase ISPa29 | Transposase |
| PNAP_RS24125 () | 94695..95765 | - | 1071 | WP_011798493.1 | IS110 family transposase ISCARN91 | Transposase |
| PNAP_RS24130 () | 95955..97056 | + | 1102 | Protein_106 | IS5 family transposase ISBuce2 | Transposase |
| PNAP_RS24135 () | 97345..98019 | + | 675 | WP_041377781.1 | hypothetical protein | - |
| PNAP_RS24140 () | 98166..98527 | + | 362 | Protein_108 | H-NS histone family protein | - |
| PNAP_RS24145 () | 98742..99356 | - | 615 | WP_011798496.1 | DUF1326 domain-containing protein | - |
| PNAP_RS24150 () | 99489..100283 | + | 795 | WP_011798497.1 | DUF2182 domain-containing protein | - |
| PNAP_RS24155 () | 100462..100899 | - | 438 | WP_011798498.1 | universal stress protein | - |
| PNAP_RS24160 () | 100931..101138 | - | 208 | Protein_112 | dodecin domain-containing protein | - |
| PNAP_RS24165 () | 101362..101760 | + | 399 | WP_011798500.1 | hypothetical protein | - |
| PNAP_RS27480 () | 102026..102193 | - | 168 | WP_157040556.1 | hypothetical protein | - |
| PNAP_RS24170 () | 102528..104033 | - | 1506 | WP_198140747.1 | FAD/NAD(P)-binding protein | - |
| PNAP_RS26515 () | 104435..104677 | - | 243 | WP_011798502.1 | tail fiber protein | - |
| PNAP_RS27810 () | 105038..105220 | - | 183 | WP_198140748.1 | hypothetical protein | - |
| PNAP_RS25340 () | 106723..107763 | + | 1041 | WP_049763850.1 | hypothetical protein | - |
| PNAP_RS24190 () | 107898..108092 | + | 195 | WP_041377783.1 | hypothetical protein | - |
| PNAP_RS24195 () | 108201..108569 | + | 369 | WP_011798507.1 | calcium-binding protein | - |
| PNAP_RS24205 () | 108970..109374 | + | 405 | WP_011798508.1 | nuclear transport factor 2 family protein | - |
| PNAP_RS24210 () | 109715..111052 | - | 1338 | WP_011798278.1 | IS4 family transposase ISAzo5 | Transposase |
| PNAP_RS24215 () | 111604..111969 | + | 366 | WP_011798509.1 | H-NS histone family protein | - |
| PNAP_RS26530 () | 112857..113309 | + | 453 | WP_011798510.1 | RNA-binding protein | - |
| PNAP_RS24230 () | 113643..114518 | + | 876 | WP_011798511.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| PNAP_RS24235 () | 114574..115206 | + | 633 | WP_011798512.1 | glutathione S-transferase | - |
| PNAP_RS24240 () | 115396..115823 | + | 428 | Protein_128 | hypothetical protein | - |
| PNAP_RS24245 () | 115959..117326 | - | 1368 | WP_157040256.1 | ISNCY family transposase ISKpn21 | Transposase |
| PNAP_RS24250 () | 117479..117910 | - | 432 | WP_041377785.1 | hypothetical protein | - |
| PNAP_RS24255 () | 118166..120811 | - | 2646 | WP_011798516.1 | UvrABC system protein A | VF |
| PNAP_RS24260 () | 121179..122066 | - | 888 | WP_011798517.1 | DMT family transporter | - |
| PNAP_RS26540 () | 122648..122824 | - | 177 | WP_083758111.1 | lipocalin family protein | - |
| PNAP_RS24270 () | 122894..124250 | + | 1357 | Protein_134 | IS701 family transposase ISBj6_B | Transposase |
| PNAP_RS26545 () | 124307..125465 | + | 1159 | Protein_135 | IS91 family transposase ISPps1 | Transposase |
| PNAP_RS24280 () | 125690..126475 | + | 786 | WP_041377786.1 | IclR family transcriptional regulator | - |
| PNAP_RS24285 () | 126592..127617 | + | 1026 | WP_011798522.1 | carbon-nitrogen hydrolase family protein | - |
| PNAP_RS24290 () | 127663..128835 | + | 1173 | WP_011798523.1 | ABC transporter substrate-binding protein | - |
| PNAP_RS24295 () | 128937..129800 | + | 864 | WP_011798524.1 | branched-chain amino acid ABC transporter permease | - |
| PNAP_RS24300 () | 129850..130872 | + | 1023 | WP_011798525.1 | branched-chain amino acid ABC transporter permease | - |
| PNAP_RS24305 () | 130865..131626 | + | 762 | WP_011798526.1 | ABC transporter ATP-binding protein | - |
| PNAP_RS24310 () | 131719..132432 | + | 714 | WP_011798527.1 | ABC transporter ATP-binding protein | - |
| PNAP_RS24315 () | 132559..132969 | - | 411 | WP_011798528.1 | hypothetical protein | - |
| PNAP_RS25360 () | 133049..133330 | - | 282 | WP_011798529.1 | IS630 family transposase ISAli2 | Transposase |
| PNAP_RS26550 () | 133591..134115 | - | 525 | WP_011798530.1 | IS630 family transposase ISSpn2 | Transposase |
| PNAP_RS26555 () | 134182..134343 | + | 162 | Protein_146 | transposase | - |
| PNAP_RS24325 () | 134363..135688 | - | 1326 | WP_011798531.1 | IS4 family transposase ISAzo5 | Transposase |
| PNAP_RS24330 () | 135818..136003 | - | 186 | WP_041377787.1 | dodecin family protein | - |
| PNAP_RS24335 () | 136273..137340 | - | 1068 | Protein_149 | PLP-dependent aminotransferase family protein | - |
| PNAP_RS24340 () | 137425..138069 | + | 645 | WP_157040561.1 | FMN-binding negative transcriptional regulator | - |
| PNAP_RS24345 () | 137950..138794 | - | 845 | Protein_151 | IS982 family transposase ISNeu1 | Transposase |
| PNAP_RS24350 () | 138953..141631 | - | 2679 | WP_041377788.1 | alpha-ketoglutarate dehydrogenase | - |
| PNAP_RS24355 () | 141753..141965 | + | 213 | Protein_153 | winged helix-turn-helix transcriptional regulator | - |
| PNAP_RS24360 () | 142059..142523 | - | 465 | WP_011798536.1 | Lrp/AsnC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|