MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 18724 bp
Accession: NC_008687 Location: 964899..983622 Organism: Paracoccus denitrificans PD1222 Replicon: chromosome
Accession: NC_008687 Location: 964899..983622 Organism: Paracoccus denitrificans PD1222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PDEN_RS19010 () | 960188..960958 | - | 771 | WP_011750056.1 | alpha/beta hydrolase | - |
| PDEN_RS19015 () | 960955..961554 | - | 600 | WP_011750057.1 | 2-hydroxychromene-2-carboxylate isomerase | - |
| PDEN_RS19020 () | 961636..962655 | + | 1020 | WP_011750058.1 | ribose-phosphate pyrophosphokinase | - |
| PDEN_RS19025 () | 962723..963175 | - | 453 | WP_011750059.1 | CoA-binding protein | - |
| PDEN_RS19030 () | 963359..963772 | - | 414 | WP_011750060.1 | YHS domain-containing protein | - |
| PDEN_RS19035 () | 963873..964670 | - | 798 | WP_011750061.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| PDEN_RS19045 () | 965152..966009 | + | 858 | WP_011750063.1 | hypothetical protein | - |
| PDEN_RS19050 () | 966002..967363 | + | 1362 | WP_011750064.1 | plasmid recombination protein | - |
| PDEN_RS19055 () | 967468..967713 | + | 246 | WP_010396097.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| PDEN_RS19060 () | 967710..967997 | + | 288 | WP_011750065.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PDEN_RS19065 () | 968056..968589 | + | 534 | WP_041530416.1 | hypothetical protein | - |
| PDEN_RS19070 () | 968814..969986 | - | 1173 | WP_011750067.1 | ATP-binding protein | - |
| PDEN_RS19075 () | 970314..970523 | - | 210 | WP_011748680.1 | hypothetical protein | - |
| PDEN_RS19080 () | 970665..970943 | - | 279 | WP_041530417.1 | hypothetical protein | - |
| PDEN_RS19085 () | 970940..971449 | - | 510 | WP_011750069.1 | hypothetical protein | - |
| PDEN_RS19090 () | 971446..971628 | - | 183 | WP_028717528.1 | hypothetical protein | - |
| PDEN_RS19095 () | 971625..971948 | - | 324 | WP_011750070.1 | zinc ribbon domain-containing protein | - |
| PDEN_RS19100 () | 972058..972303 | + | 246 | WP_011750071.1 | helix-turn-helix domain-containing protein | - |
| PDEN_RS19105 () | 972681..973571 | + | 891 | WP_049792407.1 | site-specific DNA-methyltransferase | - |
| PDEN_RS19110 () | 973580..974044 | + | 465 | WP_041530418.1 | restriction endonuclease BglII | - |
| PDEN_RS19115 () | 974059..975390 | + | 1332 | WP_011750074.1 | hypothetical protein | - |
| PDEN_RS19120 () | 975397..977307 | + | 1911 | WP_011750075.1 | DEAD/DEAH box helicase | - |
| PDEN_RS26405 () | 977304..978140 | + | 837 | WP_011750076.1 | DUF3883 domain-containing protein | - |
| PDEN_RS19135 () | 978675..979703 | - | 1029 | WP_011747348.1 | IS110 family transposase ISMdi12 | Transposase |
| PDEN_RS19145 () | 979812..981040 | + | 1229 | WP_086000168.1 | IS3 family transposase ISRtr2 | Transposase |
| PDEN_RS27185 () | 981103..981894 | - | 792 | WP_011750080.1 | helix-turn-helix domain-containing protein | - |
| PDEN_RS19155 () | 981996..982262 | + | 267 | WP_128493090.1 | hypothetical protein | - |
| PDEN_RS19160 () | 982462..983535 | + | 1074 | WP_011750082.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PDEN_RS19165 () | 983797..984180 | + | 384 | WP_128493059.1 | hypothetical protein | - |
| PDEN_RS26410 () | 984185..986485 | - | 2301 | WP_041530424.1 | hypothetical protein | - |
| PDEN_RS19175 () | 987193..987768 | - | 576 | WP_011750086.1 | hypothetical protein | - |
| PDEN_RS19180 () | 988104..988364 | + | 261 | WP_011750087.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|